Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5A

Orthogroup ID

OG0017174

Physical Location & Seq

Genomic Coordinates Reverse (-)

27621890 .. 27626638

Gene Structure 4749 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5AG229800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2472 bp

ATGGCCACCATTCCCACCACAAACGCCTTCCTCGCCACACCAACCAAAACCCCATCGGACAAATCATCCCACTCCCGGAAACACCCCCACCCAAACGACATGTCGTCGTTCGCCTCCCTCTCCAACTCCAAGTCCCGGTTCGAGGCCTACAACCGCCTCCAAGCAGCCACGGTGGCCTTCGGCGAGAAGCTCCCGATCCCCGAGATCGTTGCCCTAGGCGGCCAATCCGACGGCAAGAGCTCCCTCCTCGAAGCTCTCTTAGGGTTTCGATTCAATGTCCGCGAGGTCGAGATGGGCACTCGCAGACCTCTCATTCTCCAGATGATCCACGACCCCACAGCTCTCGAGCCCCGGTGCCGATTCCAGGAGGAGGATTCTGAAGAATATGGAAGTCCGATCGTGTTGCCATCTGCAATTGCGGATGTTATAAAGTCCAGAACAGATGGGCTTTTGAAGAAGACGAAAACTGCAGTTTCTTCCAAGCCAATTGTGATGAGAGCAGAATATGCTCATTGTCCAAATCTAACAATTATTGATACTCCAGGCTTTGTTCTTAAGGCGAAGAAAGGAGAACCTGAAAGGACACCTGAAGAAATTCTTTCCATGGTGAAGTCATTGGCTAGTCCTCCCCATCGCATTCTCCTCTTCCTTCAACAAAGTAGTGTGGAGTGGTGCTCATCCTTGTGGTTGGATTCCATTCGTGAAATTGATCCAACATTTAAAAGGACTATAATTGTTGTCTCGAAATTTGATAATCGTCTAAAGGAATTTTCTGATCGGTGGGAAGTGGACCGCTATCTGAGTGCAAGTGGTTACCTTGGAGATAACACTCACCCATATTTTGTTGCCTTGCCAAAGGATAGGAATACCATTTCAAATGACGAGTTCCGCAAGCAAATATCTCAGGTAGACTCAGAAGTTCTACGACATCTGCGTGAAGGTGTGAAGGGAGGATTTGATGAAGAAAAGTTTAGGCCTTACATTGGTTTTGGCTCTTTGAGAGAATATCTGGAGTCTGAACTACAAAAAAGGTATAAAGAAGCTGCCCCAGCTACTCTTGCTTTGCTTGAAGAGCGCTGCAGTCAAGTCACCACCGAACTAGCCACGATGGATTCAAAAATACAGGCCACCTCTGATGTTTCTCAGCTTAGAAGATCTGCAATGTTGTACACAGCTTCTATAAGCAATCATGTGGGGGCTTTGATTGATGGAGCAGCAGATCCTGCCCCCGAGCAATGGGGAAAAACAACTTTTGATGAGCGGTCAGAAAGTGGTATTGGGGGTTGGCCTGGTGTTACAGCAGATATAAGGCCTCCCAATGCTACTCTTCGACTGTATGGAGGAGCTGCATTTGAAAGGGTGATGCATGAATTCCACTGTGCTGCATATTCAATTGAATGCCCTCCAGTGTCGAGGGAGAAGGTAGCAAATATACTACTTGCCCATGCTAGCAGAGGTGGGGGTAGAGGAGTGACAGAGGCAGCTGCAGAGATTGCACGTGCTGCTGCCCGATCATGGCTTGCTCCTCTTCTTGACACTGCATGTGATCGGCTTTCTTTTGTTTTGGGAAATCTCTTTGAGCTTGCTCTAGAACGGACTCGCTACCGTGATTCAGAAAATGGGAGGAAATCAGGGAATATGGATGGGTATGTTGGTTTTCATGCTGCTCTAAGGCAGGCTTACAATCGCTTTGTAAAAGATCTATCTAAACAGTGCAAGCAACTAGTCCGCCACCACCTGGACTCGGTTACAAGTCCATACTCATTGGTTGGTTATGAGAATGATTTCCAAGGAGGCTATGGCTCCAGTGCAACCTCTTTTGTCAGATCTAACCAATCCTCAGTCAATTCATTTTTACTTGAGTTGTCTGACGTCACAATGATAGATCAGGAGAATATCCCTCCAGAAAAGAATGCACAGCAAACAACTCCAGGAAAAGGTTCAGAGGCCAGAGATTCTCTTCGAGAATGCCAAATGACTGTGCCTGAGACCCCATCACCTGATCAGCCCTGTGATGGTGCTGCAAAGAAGGATCTTGGTAATGGCATTGATATTGGACCCAGAAAGCGTGTATCAAGAATGGCAGGCAATAACAAATATTTTGACAATGTAAGAGCACAAAATGGGGGTGCTCTTCTCTTTGGAAATGGTGATGATGCTTTAAGATCAGGCTCGCCTTATTCAGAAATCTGTTCATCTGCTGCACAGCATTTTGCACGCATACGCGAAGTTCTTGTTGAGAGAAATGTAGCCTCAGCTCTGAATTCTGGGTTCCTAACCCCTTGTCGGGATCGGCTTGTTCTGGCACTTGGTTTGGATTTGTTTGCTGTGAATGATGACAAATTCATGGACATGTTTATTGTCCCTGGTGCCATTGATCTACTACAAAACGAGCGGCAGTCACTCCAGAAGCGTCAAAAGACACTCCAGTCTTGCTTGACTGAGTTTAAAACTCTTGCTCGAGCACTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000266 GO:0000278 GO:0000281 GO:0000910 GO:0000911 GO:0003674 GO:0003824 GO:0003924 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006996 GO:0007005 GO:0007049 GO:0008017 GO:0008092 GO:0008150 GO:0009504 GO:0009987 GO:0015631 GO:0016043 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0017111 GO:0022402 GO:0032506 GO:0044424 GO:0044444 GO:0044464 GO:0048285 GO:0051301 GO:0061640 GO:0071840 GO:1902410 GO:1903047

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Dynamin_N

Protein Analysis

823

Amino Acids

91.05

Weight (kDa)

6.98

Isoelectric Point (pI)

48.26

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Dynamin_N	PF00350	69 - 249	8e-34	Dynamin family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0017174)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G53140
fragaria_vesca	FvH4_3g19810
malus_domestica	MD03G1228500.v1.1
prunus_persica	Prupe.4G180200_v2.0.a1
pyrus_communis	pycom03g17660
rosa_chinensis	RchiOBHm_Chr5g0033231
rosa_laevigata	RLG00000033459
rosa_multiflora	Rmu_ssc0000299.1_g000012
rosa_roxburghii	Rroxscaffold_1G00046760
rosa_rugosa	Rorug05G0138000
rosa_samantha	Rh5AG229800 Rh5BG230600
rosa_wichuraiana	Rw5G021000

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	428
AasI	GACNNNNNNGTC	1 cut(s)	2428
AatII	GACGTC	1 cut(s)	1875
AccB1I	GGYRCC	2 cut(s)	354, 2369
AccB7I	CCANNNNNTGG	1 cut(s)	1738
AccBSI	CCGCTC	2 cut(s)	1261, 2395
AccI	GTMKAC	1 cut(s)	909
AccII	CGCG	2 cut(s)	282, 2226
AciI	CCGC	9 cut(s)	154, 219, 280, 419, 793, 889, 1261, 1729, 2395
AclWI	GGATC	6 cut(s)	190, 319, 704, 1214, 2040, 2298
AcoI	YGGCCR	2 cut(s)	3, 220
AcsI	RAATTY	6 cut(s)	594, 746, 767, 1370, 2263, 2342
AcuI	CTGAAG	2 cut(s)	399, 609
AcvI	CACGTG	1 cut(s)	1499
AcyI	GRCGYC	1 cut(s)	1872
AfaI	GTAC	1 cut(s)	1169
AfeI	AGCGCT	1 cut(s)	1076
AflII	CTTAAG	1 cut(s)	554
AflIII	ACRYGT	2 cut(s)	99, 2352
AgsI	TTSAA	9 cut(s)	274, 454, 653, 876, 1070, 1116, 1355, 1392, 1397
AhdI	GACNNNNNGTC	1 cut(s)	103
AhlI	ACTAGT	1 cut(s)	1723
AjnI	CCWGG	6 cut(s)	363, 541, 1288, 1737, 1930, 2365
AjuI	GAANNNNNNNTTGG	4 cut(s)	122, 154, 1260, 1292
Alw21I	GWGCWC	5 cut(s)	242, 677, 2119, 2134, 2467
Alw26I	GTCTC	2 cut(s)	745, 1982
AlwI	GGATC	6 cut(s)	190, 319, 704, 1214, 2040, 2298
AlwNI	CAGNNNCTG	1 cut(s)	1223
Ama87I	CYCGRG	4 cut(s)	200, 344, 1229, 2460
Aor51HI	AGCGCT	1 cut(s)	1076
AoxI	GGCC	9 cut(s)	3, 144, 174, 220, 974, 1125, 1286, 1310, 1947
ApoI	RAATTY	6 cut(s)	594, 746, 767, 1370, 2263, 2342
ArsI	GACNNNNNNTTYG	2 cut(s)	86, 118
Asp700I	GAANNNNTTC	3 cut(s)	594, 1784, 1939
AspA2I	CCTAGG	1 cut(s)	214
AspLEI	GCGC	1 cut(s)	1077
AspS9I	GGNCC	2 cut(s)	790, 2057
AsuC2I	CCSGG	3 cut(s)	76, 136, 352
AsuHPI	GGTGA	6 cut(s)	619, 824, 1081, 1372, 1989, 2162
AsuNHI	GCTAGC	1 cut(s)	1448
AvaI	CYCGRG	4 cut(s)	200, 344, 1229, 2460
AvaII	GGWCC	2 cut(s)	790, 2057
AvrII	CCTAGG	1 cut(s)	214
BaeGI	GKGCMC	1 cut(s)	299
BalI	TGGCCA	1 cut(s)	5
BanI	GGYRCC	2 cut(s)	354, 2369
BanII	GRGCYC	2 cut(s)	242, 351
BbrPI	CACGTG	1 cut(s)	1499
BbsI	GAAGAC	1 cut(s)	464
Bbv12I	GWGCWC	5 cut(s)	242, 677, 2119, 2134, 2467
BbvCI	CCTCAGC	1 cut(s)	2254
BceAI	ACGGC	1 cut(s)	247
BcgI	CGANNNNNNTGC	4 cut(s)	191, 225, 385, 419
BciT130I	CCWGG	6 cut(s)	365, 543, 1290, 1739, 1932, 2367
BclI	TGATCA	1 cut(s)	2002
BcnI	CCSGG	3 cut(s)	76, 136, 352
BcoDI	GTCTC	2 cut(s)	745, 1982
BcuI	ACTAGT	1 cut(s)	1723
BfaI	CTAG	6 cut(s)	215, 621, 1100, 1449, 1589, 1724
BfmI	CTRYAG	3 cut(s)	468, 1078, 1485
BfoI	RGCGCY	1 cut(s)	1078
BfrI	CTTAAG	1 cut(s)	554
BglI	GCCNNNNNGGC	1 cut(s)	173
BglII	AGATCT	3 cut(s)	1154, 1699, 1826
BlnI	CCTAGG	1 cut(s)	214
Bme1390I	CCNGG	9 cut(s)	76, 136, 352, 365, 543, 1290, 1739, 1932, 2367
Bme18I	GGWCC	2 cut(s)	790, 2057
BmeRI	GACNNNNNGTC	1 cut(s)	103
BmeT110I	CYCGRG	4 cut(s)	200, 344, 1229, 2460
BmgT120I	GGNCC	2 cut(s)	790, 2057
BmiI	GGNNCC	5 cut(s)	356, 1804, 2059, 2273, 2371
BmrFI	CCNGG	9 cut(s)	76, 136, 352, 365, 543, 1290, 1739, 1932, 2367
BmsI	GCATC	2 cut(s)	1353, 2146
BmtI	GCTAGC	1 cut(s)	1452
BpiI	GAAGAC	1 cut(s)	464
BplI	GAGNNNNNCTC	2 cut(s)	659, 691
BpmI	CTGGAG	9 cut(s)	302, 525, 1031, 1389, 1789, 1887, 1914, 2390, 2411
Bpu10I	CCTNAGC	1 cut(s)	2254
BpuEI	CTTGAG	1 cut(s)	1880
BpuMI	CCSGG	3 cut(s)	76, 136, 352
BsaAI	YACGTR	1 cut(s)	1499
BsaHI	GRCGYC	1 cut(s)	1872
BsaI	GGTCTC	1 cut(s)	1982
BsaJI	CCNNGG	7 cut(s)	168, 214, 350, 603, 817, 1789, 2365
Bse1I	ACTGG	3 cut(s)	1406, 1806, 2428
Bse3DI	GCAATG	2 cut(s)	1167, 1241
BseBI	CCWGG	6 cut(s)	365, 543, 1290, 1739, 1932, 2367
BseDI	CCNNGG	7 cut(s)	168, 214, 350, 603, 817, 1789, 2365
BseGI	GGATG	4 cut(s)	65, 427, 677, 1648
BseMI	GCAATG	2 cut(s)	1167, 1241
BseMII	CTCAG	8 cut(s)	791, 917, 927, 1157, 1854, 1977, 2268, 2433
BseNI	ACTGG	3 cut(s)	1406, 1806, 2428
BseRI	GAGGAG	6 cut(s)	236, 383, 632, 1356, 1482, 1515
BseSI	GKGCMC	1 cut(s)	299
BseYI	CCCAGC	1 cut(s)	1048
BsgI	GTGCAG	1 cut(s)	2187
Bsh1236I	CGCG	2 cut(s)	282, 2226
Bsh1285I	CGRYCG	1 cut(s)	399
BshFI	GGCC	9 cut(s)	5, 146, 176, 222, 976, 1127, 1288, 1312, 1949
BshNI	GGYRCC	2 cut(s)	354, 2369
BsiEI	CGRYCG	1 cut(s)	399
BsiHKAI	GWGCWC	5 cut(s)	242, 677, 2119, 2134, 2467
BsiHKCI	CYCGRG	4 cut(s)	200, 344, 1229, 2460
BsiSI	CCGG	3 cut(s)	76, 136, 352
BslFI	GGGAC	2 cut(s)	118, 2348
BsmAI	GTCTC	2 cut(s)	745, 1982
BsmFI	GGGAC	2 cut(s)	118, 2348
BsmI	GAATGC	4 cut(s)	636, 1403, 1918, 1973
BsnI	GGCC	9 cut(s)	5, 146, 176, 222, 976, 1127, 1288, 1312, 1949
Bso31I	GGTCTC	1 cut(s)	1982
BsoBI	CYCGRG	4 cut(s)	200, 344, 1229, 2460
Bsp1286I	GDGCHC	7 cut(s)	242, 299, 351, 677, 2119, 2134, 2467
Bsp1407I	TGTACA	1 cut(s)	1167
Bsp19I	CCATGG	1 cut(s)	603
BspACI	CCGC	9 cut(s)	154, 219, 280, 419, 793, 889, 1261, 1729, 2395
BspANI	GGCC	9 cut(s)	5, 146, 176, 222, 976, 1127, 1288, 1312, 1949
BspCNI	CTCAG	8 cut(s)	792, 916, 926, 1156, 1853, 1978, 2267, 2434
BspFNI	CGCG	2 cut(s)	282, 2226
BspLI	GGNNCC	5 cut(s)	356, 1804, 2059, 2273, 2371
BspMAI	CTGCAG	3 cut(s)	472, 1082, 1489
BspOI	GCTAGC	1 cut(s)	1452
BspPI	GGATC	6 cut(s)	190, 319, 704, 1214, 2040, 2298
BspQI	GCTCTTC	2 cut(s)	1065, 2139
BspT107I	GGYRCC	2 cut(s)	354, 2369
BspTI	CTTAAG	1 cut(s)	554
BspTNI	GGTCTC	1 cut(s)	1982
BsrBI	CCGCTC	2 cut(s)	1261, 2395
BsrDI	GCAATG	2 cut(s)	1167, 1241
BsrGI	TGTACA	1 cut(s)	1167
BsrI	ACTGG	3 cut(s)	1406, 1806, 2428
BssECI	CCNNGG	7 cut(s)	168, 214, 350, 603, 817, 1789, 2365
BssNI	GRCGYC	1 cut(s)	1872
BssT1I	CCWWGG	4 cut(s)	214, 603, 817, 1789
Bst2UI	CCWGG	6 cut(s)	365, 543, 1290, 1739, 1932, 2367
Bst4CI	ACNGT	6 cut(s)	172, 1335, 1379, 1607, 1713, 1981
Bst6I	CTCTTC	6 cut(s)	650, 1065, 1332, 1533, 1965, 2139
BstACI	GRCGYC	1 cut(s)	1872
BstAFI	CTTAAG	1 cut(s)	554
BstAPI	GCANNNNNTGC	4 cut(s)	506, 1223, 1493, 1502
BstAUI	TGTACA	1 cut(s)	1167
BstBAI	YACGTR	1 cut(s)	1499
BstC8I	GCNNGC	9 cut(s)	893, 1450, 1521, 1584, 1677, 1718, 2086, 2174, 2218
BstDSI	CCRYGG	2 cut(s)	168, 603
BstEII	GGTNACC	1 cut(s)	812
BstF5I	GGATG	4 cut(s)	65, 427, 677, 1648
BstFNI	CGCG	2 cut(s)	282, 2226
BstH2I	RGCGCY	1 cut(s)	1078
BstHHI	GCGC	1 cut(s)	1077
BstMAI	GTCTC	2 cut(s)	745, 1982
BstMCI	CGRYCG	1 cut(s)	399
BstMWI	GCNNNNNNNGC	9 cut(s)	32, 173, 506, 1049, 1058, 1072, 1223, 1493, 1502
BstNI	CCWGG	6 cut(s)	365, 543, 1290, 1739, 1932, 2367
BstNSI	RCATGY	3 cut(s)	103, 1545, 2356
BstPI	GGTNACC	1 cut(s)	812
BstSCI	CCNGG	9 cut(s)	74, 134, 350, 363, 541, 1288, 1737, 1930, 2365
BstSFI	CTRYAG	3 cut(s)	468, 1078, 1485
BstSLI	GKGCMC	1 cut(s)	299
BstUI	CGCG	2 cut(s)	282, 2226
BstV2I	GAAGAC	1 cut(s)	464
BstX2I	RGATCY	5 cut(s)	1154, 1219, 1699, 1826, 2032
BstYI	RGATCY	5 cut(s)	1154, 1219, 1699, 1826, 2032
BsuRI	GGCC	9 cut(s)	5, 146, 176, 222, 976, 1127, 1288, 1312, 1949
BtgI	CCRYGG	2 cut(s)	168, 603
BtgZI	GCGATG	1 cut(s)	617
BtsCI	GGATG	4 cut(s)	65, 427, 677, 1648
BtsI	GCAGTG	1 cut(s)	1536
BtsIMutI	CAGTG	5 cut(s)	1375, 1413, 1536, 1718, 1813
Cac8I	GCNNGC	9 cut(s)	893, 1450, 1521, 1584, 1677, 1718, 2086, 2174, 2218
CaiI	CAGNNNCTG	1 cut(s)	1223
CfoI	GCGC	1 cut(s)	1077
Cfr13I	GGNCC	2 cut(s)	790, 2057
CseI	GACGC	1 cut(s)	2402
Csp6I	GTAC	1 cut(s)	1168
CviQI	GTAC	1 cut(s)	1168
DraI	TTTAAA	2 cut(s)	721, 2449
DrdI	GACNNNNNNGTC	1 cut(s)	2428
DriI	GACNNNNNGTC	1 cut(s)	103
DseDI	GACNNNNNNGTC	1 cut(s)	2428
EaeI	YGGCCR	2 cut(s)	3, 220
Eam1104I	CTCTTC	6 cut(s)	650, 1065, 1332, 1533, 1965, 2139
Eam1105I	GACNNNNNGTC	1 cut(s)	103
EarI	CTCTTC	6 cut(s)	650, 1065, 1332, 1533, 1965, 2139
EciI	GGCGGA	1 cut(s)	1718
Ecl136II	GAGCTC	1 cut(s)	240
Eco130I	CCWWGG	4 cut(s)	214, 603, 817, 1789
Eco147I	AGGCCT	3 cut(s)	146, 976, 1312
Eco24I	GRGCYC	2 cut(s)	242, 351
Eco31I	GGTCTC	1 cut(s)	1982
Eco47I	GGWCC	2 cut(s)	790, 2057
Eco47III	AGCGCT	1 cut(s)	1076
Eco53kI	GAGCTC	1 cut(s)	240
Eco57I	CTGAAG	2 cut(s)	399, 609
Eco72I	CACGTG	1 cut(s)	1499
Eco88I	CYCGRG	4 cut(s)	200, 344, 1229, 2460
Eco91I	GGTNACC	1 cut(s)	812
EcoICRI	GAGCTC	1 cut(s)	240
EcoO65I	GGTNACC	1 cut(s)	812
EcoRI	GAATTC	2 cut(s)	1370, 2263
EcoRII	CCWGG	6 cut(s)	363, 541, 1288, 1737, 1930, 2365
EcoT14I	CCWWGG	4 cut(s)	214, 603, 817, 1789
EcoT22I	ATGCAT	1 cut(s)	1368
EcoT38I	GRGCYC	2 cut(s)	242, 351
ErhI	CCWWGG	4 cut(s)	214, 603, 817, 1789
FalI	AAGNNNNNCTT	4 cut(s)	582, 614, 1663, 1695
FaqI	GGGAC	2 cut(s)	118, 2348
FbaI	TGATCA	1 cut(s)	2002
FblI	GTMKAC	1 cut(s)	909
FokI	GGATG	4 cut(s)	52, 434, 664, 1655
FriOI	GRGCYC	2 cut(s)	242, 351
FspBI	CTAG	6 cut(s)	215, 621, 1100, 1449, 1589, 1724
GlaI	GCGC	1 cut(s)	1076
GsaI	CCCAGC	1 cut(s)	1052
GsuI	CTGGAG	9 cut(s)	302, 525, 1031, 1389, 1789, 1887, 1914, 2390, 2411
HaeII	RGCGCY	1 cut(s)	1078
HaeIII	GGCC	9 cut(s)	5, 146, 176, 222, 976, 1127, 1288, 1312, 1949
HapII	CCGG	3 cut(s)	76, 136, 352
HgaI	GACGC	1 cut(s)	2402
HhaI	GCGC	1 cut(s)	1077
Hin1I	GRCGYC	1 cut(s)	1872
Hin6I	GCGC	1 cut(s)	1075
HinP1I	GCGC	1 cut(s)	1075
HpaII	CCGG	3 cut(s)	76, 136, 352
HphI	GGTGA	6 cut(s)	619, 824, 1081, 1372, 1989, 2162
Hpy166II	GTNNAC	3 cut(s)	790, 910, 1170
Hpy8I	GTNNAC	3 cut(s)	790, 910, 1170
Hpy99I	CGWCG	2 cut(s)	109, 233
HpyAV	CCTTC	7 cut(s)	37, 187, 659, 932, 940, 1414, 2023
HpyCH4III	ACNGT	6 cut(s)	172, 1335, 1379, 1607, 1713, 1981
HpyCH4IV	ACGT	2 cut(s)	1498, 1872
HpyF10VI	GCNNNNNNNGC	9 cut(s)	32, 173, 506, 1049, 1058, 1072, 1223, 1493, 1502
HpySE526I	ACGT	2 cut(s)	1498, 1872
Hsp92I	GRCGYC	1 cut(s)	1872
HspAI	GCGC	1 cut(s)	1075
Ksp22I	TGATCA	1 cut(s)	2002
LguI	GCTCTTC	2 cut(s)	1065, 2139
LmnI	GCTCC	6 cut(s)	195, 245, 1211, 1343, 1528, 1808
LweI	GCATC	2 cut(s)	1353, 2146
MaeI	CTAG	6 cut(s)	215, 621, 1100, 1449, 1589, 1724
MaeII	ACGT	2 cut(s)	1498, 1872
MaeIII	GTNAC	7 cut(s)	812, 1087, 1294, 1471, 1747, 1873, 2400
MbiI	CCGCTC	2 cut(s)	1261, 2395
MfeI	CAATTG	3 cut(s)	414, 486, 1392
MflI	RGATCY	5 cut(s)	1154, 1219, 1699, 1826, 2032
MhlI	GDGCHC	7 cut(s)	242, 299, 351, 677, 2119, 2134, 2467
MlsI	TGGCCA	1 cut(s)	5
MluNI	TGGCCA	1 cut(s)	5
MlyI	GAGTC	4 cut(s)	905, 1022, 1591, 1736
MmeI	TCCRAC	4 cut(s)	147, 252, 669, 737
Mox20I	TGGCCA	1 cut(s)	5
Mph1103I	ATGCAT	1 cut(s)	1368
MroXI	GAANNNNTTC	3 cut(s)	594, 1784, 1939
MscI	TGGCCA	1 cut(s)	5
MseI	TTAA	4 cut(s)	555, 720, 2162, 2448
MslI	CAYNNNNRTG	3 cut(s)	682, 933, 2351
Msp20I	TGGCCA	1 cut(s)	5
MspA1I	CMGCKG	1 cut(s)	1484
MspCI	CTTAAG	1 cut(s)	554
MspI	CCGG	3 cut(s)	76, 136, 352
MspR9I	CCNGG	9 cut(s)	76, 136, 352, 365, 543, 1290, 1739, 1932, 2367
MunI	CAATTG	3 cut(s)	414, 486, 1392
Mva1269I	GAATGC	4 cut(s)	636, 1403, 1918, 1973
MvaI	CCWGG	6 cut(s)	365, 543, 1290, 1739, 1932, 2367
MvnI	CGCG	2 cut(s)	282, 2226
MwoI	GCNNNNNNNGC	9 cut(s)	32, 173, 506, 1049, 1058, 1072, 1223, 1493, 1502
NciI	CCSGG	3 cut(s)	76, 136, 352
NcoI	CCATGG	1 cut(s)	603
NheI	GCTAGC	1 cut(s)	1448
NlaIV	GGNNCC	5 cut(s)	356, 1804, 2059, 2273, 2371
NmuCI	GTSAC	4 cut(s)	1087, 1471, 1873, 2400
NsiI	ATGCAT	1 cut(s)	1368
NspI	RCATGY	3 cut(s)	103, 1545, 2356
PaeR7I	CTCGAG	2 cut(s)	344, 2460
PceI	AGGCCT	3 cut(s)	146, 976, 1312
PciI	ACATGT	2 cut(s)	99, 2352
PciSI	GCTCTTC	2 cut(s)	1065, 2139
PcsI	WCGNNNNNNNCGW	1 cut(s)	931
PctI	GAATGC	4 cut(s)	636, 1403, 1918, 1973
PdmI	GAANNNNTTC	3 cut(s)	594, 1784, 1939
PfeI	GAWTC	7 cut(s)	270, 360, 374, 692, 1112, 1610, 1955
PflMI	CCANNNNNTGG	1 cut(s)	1738
PfoI	TCCNGGA	3 cut(s)	74, 363, 1930
Ple19I	CGATCG	1 cut(s)	399
PleI	GAGTC	4 cut(s)	905, 1021, 1591, 1736
PmaCI	CACGTG	1 cut(s)	1499
PmlI	CACGTG	1 cut(s)	1499
PpsI	GAGTC	4 cut(s)	905, 1021, 1591, 1736
Ppu21I	YACGTR	1 cut(s)	1499
PscI	ACATGT	2 cut(s)	99, 2352
PsiI	TTATAA	1 cut(s)	428
Psp124BI	GAGCTC	1 cut(s)	242
Psp6I	CCWGG	6 cut(s)	363, 541, 1288, 1737, 1930, 2365
PspCI	CACGTG	1 cut(s)	1499
PspEI	GGTNACC	1 cut(s)	812
PspFI	CCCAGC	1 cut(s)	1048
PspGI	CCWGG	6 cut(s)	363, 541, 1288, 1737, 1930, 2365
PspN4I	GGNNCC	5 cut(s)	356, 1804, 2059, 2273, 2371
PspPI	GGNCC	2 cut(s)	790, 2057
PspXI	VCTCGAGB	1 cut(s)	2460
PstI	CTGCAG	3 cut(s)	472, 1082, 1489
PstNI	CAGNNNCTG	1 cut(s)	1223
PsuI	RGATCY	5 cut(s)	1154, 1219, 1699, 1826, 2032
PvuI	CGATCG	1 cut(s)	399
PvuII	CAGCTG	1 cut(s)	1484
RsaI	GTAC	1 cut(s)	1169
RsaNI	GTAC	1 cut(s)	1168
RseI	CAYNNNNRTG	3 cut(s)	682, 933, 2351
SacI	GAGCTC	1 cut(s)	242
SapI	GCTCTTC	2 cut(s)	1065, 2139
SaqAI	TTAA	4 cut(s)	555, 720, 2162, 2448
Sau96I	GGNCC	2 cut(s)	790, 2057
SchI	GAGTC	4 cut(s)	905, 1022, 1591, 1736
ScrFI	CCNGG	9 cut(s)	76, 136, 352, 365, 543, 1290, 1739, 1932, 2367
SduI	GDGCHC	7 cut(s)	242, 299, 351, 677, 2119, 2134, 2467
SfaNI	GCATC	2 cut(s)	1353, 2146
SfcI	CTRYAG	3 cut(s)	468, 1078, 1485
Sfr274I	CTCGAG	2 cut(s)	344, 2460
SinI	GGWCC	2 cut(s)	790, 2057
SlaI	CTCGAG	2 cut(s)	344, 2460
SmiMI	CAYNNNNRTG	3 cut(s)	682, 933, 2351
SmlI	CTYRAG	4 cut(s)	344, 554, 1859, 2460
SmoI	CTYRAG	4 cut(s)	344, 554, 1859, 2460
SpeI	ACTAGT	1 cut(s)	1723
SseBI	AGGCCT	3 cut(s)	146, 976, 1312
SsiI	CCGC	9 cut(s)	154, 219, 280, 419, 793, 889, 1261, 1729, 2395
SspI	AATATT	1 cut(s)	2099
SspMI	CTAG	6 cut(s)	215, 621, 1100, 1449, 1589, 1724
SstI	GAGCTC	1 cut(s)	242
StuI	AGGCCT	3 cut(s)	146, 976, 1312
StyD4I	CCNGG	9 cut(s)	74, 134, 350, 363, 541, 1288, 1737, 1930, 2365
StyI	CCWWGG	4 cut(s)	214, 603, 817, 1789
TaaI	ACNGT	6 cut(s)	172, 1335, 1379, 1607, 1713, 1981
TaiI	ACGT	2 cut(s)	1501, 1875
TatI	WGTACW	1 cut(s)	1167
TauI	GCSGC	2 cut(s)	222, 2398
TfiI	GAWTC	7 cut(s)	270, 360, 374, 692, 1112, 1610, 1955
Tru1I	TTAA	4 cut(s)	555, 720, 2162, 2448
Tru9I	TTAA	4 cut(s)	555, 720, 2162, 2448
TscAI	CASTG	5 cut(s)	1382, 1413, 1543, 1718, 1813
TseFI	GTSAC	4 cut(s)	1087, 1471, 1873, 2400
Tsp45I	GTSAC	4 cut(s)	1087, 1471, 1873, 2400
TspDTI	ATGAA	6 cut(s)	975, 1383, 1649, 1839, 2184, 2335
TspGWI	ACGGA	1 cut(s)	1609
TspRI	CASTG	5 cut(s)	1382, 1413, 1543, 1718, 1813
Van91I	CCANNNNNTGG	1 cut(s)	1738
Vha464I	CTTAAG	1 cut(s)	554
VpaK11BI	GGWCC	2 cut(s)	790, 2057
XapI	RAATTY	6 cut(s)	594, 746, 767, 1370, 2263, 2342
XbaI	TCTAGA	1 cut(s)	1588
XceI	RCATGY	3 cut(s)	103, 1545, 2356
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1796
XhoI	CTCGAG	2 cut(s)	344, 2460
XmaJI	CCTAGG	1 cut(s)	214
XmiI	GTMKAC	1 cut(s)	909
XmnI	GAANNNNTTC	3 cut(s)	594, 1784, 1939
XspI	CTAG	6 cut(s)	215, 621, 1100, 1449, 1589, 1724
ZraI	GACGTC	1 cut(s)	1873
Zsp2I	ATGCAT	1 cut(s)	1368

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.