histone ubiquitination
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| Species | Orthologous Gene IDs |
|---|---|
| malus_domestica | MD04G1160500.v1.1 MD11G1180400.v1.1 |
| pyrus_communis | pycom01g22280 pycom12g15390 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 1 cut(s) | 26 |
| Acc36I | ACCTGC | 1 cut(s) | 87 |
| AccB1I | GGYRCC | 1 cut(s) | 100 |
| AccI | GTMKAC | 1 cut(s) | 26 |
| AciI | CCGC | 1 cut(s) | 96 |
| AcyI | GRCGYC | 1 cut(s) | 23 |
| AgsI | TTSAA | 1 cut(s) | 61 |
| AjnI | CCWGG | 1 cut(s) | 105 |
| Alw26I | GTCTC | 1 cut(s) | 48 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 79 |
| ApeKI | GCWGC | 1 cut(s) | 67 |
| AspS9I | GGNCC | 1 cut(s) | 76 |
| AvaII | GGWCC | 1 cut(s) | 76 |
| BaeGI | GKGCMC | 1 cut(s) | 105 |
| BanI | GGYRCC | 1 cut(s) | 100 |
| BbvI | GCAGC | 1 cut(s) | 54 |
| BciT130I | CCWGG | 1 cut(s) | 107 |
| BcoDI | GTCTC | 1 cut(s) | 48 |
| BfmI | CTRYAG | 1 cut(s) | 84 |
| BfuAI | ACCTGC | 1 cut(s) | 87 |
| BisI | GCNGC | 1 cut(s) | 68 |
| BlsI | GCNGC | 1 cut(s) | 69 |
| Bme1390I | CCNGG | 1 cut(s) | 107 |
| Bme18I | GGWCC | 1 cut(s) | 76 |
| BmgT120I | GGNCC | 1 cut(s) | 76 |
| BmiI | GGNNCC | 1 cut(s) | 102 |
| BmrFI | CCNGG | 1 cut(s) | 107 |
| BmsI | GCATC | 1 cut(s) | 140 |
| BsaHI | GRCGYC | 1 cut(s) | 23 |
| BsaJI | CCNNGG | 1 cut(s) | 105 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 13, 43, 139, 169 |
| BseBI | CCWGG | 1 cut(s) | 107 |
| BseDI | CCNNGG | 1 cut(s) | 105 |
| BseSI | GKGCMC | 1 cut(s) | 105 |
| BseXI | GCAGC | 1 cut(s) | 54 |
| BshNI | GGYRCC | 1 cut(s) | 100 |
| BsmAI | GTCTC | 1 cut(s) | 48 |
| BsmI | GAATGC | 1 cut(s) | 136 |
| Bsp1286I | GDGCHC | 1 cut(s) | 105 |
| BspACI | CCGC | 1 cut(s) | 96 |
| BspLI | GGNNCC | 1 cut(s) | 102 |
| BspMAI | CTGCAG | 1 cut(s) | 88 |
| BspMI | ACCTGC | 1 cut(s) | 87 |
| BspT107I | GGYRCC | 1 cut(s) | 100 |
| BssECI | CCNNGG | 1 cut(s) | 105 |
| BssNI | GRCGYC | 1 cut(s) | 23 |
| Bst2UI | CCWGG | 1 cut(s) | 107 |
| BstACI | GRCGYC | 1 cut(s) | 23 |
| BstC8I | GCNNGC | 1 cut(s) | 84 |
| BstMAI | GTCTC | 1 cut(s) | 48 |
| BstNI | CCWGG | 1 cut(s) | 107 |
| BstSCI | CCNGG | 1 cut(s) | 105 |
| BstSFI | CTRYAG | 1 cut(s) | 84 |
| BstSLI | GKGCMC | 1 cut(s) | 105 |
| BstV1I | GCAGC | 1 cut(s) | 54 |
| BveI | ACCTGC | 1 cut(s) | 87 |
| Cac8I | GCNNGC | 1 cut(s) | 84 |
| CaiI | CAGNNNCTG | 1 cut(s) | 79 |
| Cfr13I | GGNCC | 1 cut(s) | 76 |
| CviJI | RGCY | 2 cut(s) | 46, 67 |
| CviKI_1 | RGCY | 2 cut(s) | 46, 67 |
| Eco47I | GGWCC | 1 cut(s) | 76 |
| EcoO109I | RGGNCCY | 1 cut(s) | 76 |
| EcoRII | CCWGG | 1 cut(s) | 105 |
| FaiI | YATR | 3 cut(s) | 119, 140, 175 |
| FauI | CCCGC | 1 cut(s) | 89 |
| FblI | GTMKAC | 1 cut(s) | 26 |
| Fnu4HI | GCNGC | 1 cut(s) | 68 |
| Fsp4HI | GCNGC | 1 cut(s) | 68 |
| GluI | GCNGC | 1 cut(s) | 68 |
| Hin1I | GRCGYC | 1 cut(s) | 23 |
| HincII | GTYRAC | 1 cut(s) | 27 |
| HindII | GTYRAC | 1 cut(s) | 27 |
| HinfI | GANTC | 1 cut(s) | 28 |
| Hpy166II | GTNNAC | 1 cut(s) | 27 |
| Hpy188III | TCNNGA | 2 cut(s) | 61, 212 |
| Hpy8I | GTNNAC | 1 cut(s) | 27 |
| Hpy99I | CGWCG | 2 cut(s) | 25, 28 |
| HpyAV | CCTTC | 1 cut(s) | 34 |
| HpyCH4IV | ACGT | 1 cut(s) | 23 |
| HpyCH4V | TGCA | 4 cut(s) | 35, 70, 86, 153 |
| HpySE526I | ACGT | 1 cut(s) | 23 |
| Hsp92I | GRCGYC | 1 cut(s) | 23 |
| LpnPI | CCDG | 7 cut(s) | 45, 59, 72, 92, 92, 96, 119 |
| Lsp1109I | GCAGC | 1 cut(s) | 54 |
| LweI | GCATC | 1 cut(s) | 140 |
| MaeII | ACGT | 1 cut(s) | 23 |
| MhlI | GDGCHC | 1 cut(s) | 105 |
| MlyI | GAGTC | 1 cut(s) | 22 |
| MmeI | TCCRAC | 1 cut(s) | 141 |
| MnlI | CCTC | 1 cut(s) | 57 |
| MspR9I | CCNGG | 1 cut(s) | 107 |
| Mva1269I | GAATGC | 1 cut(s) | 136 |
| MvaI | CCWGG | 1 cut(s) | 107 |
| NlaIV | GGNNCC | 1 cut(s) | 102 |
| PctI | GAATGC | 1 cut(s) | 136 |
| PkrI | GCNGC | 1 cut(s) | 69 |
| PleI | GAGTC | 1 cut(s) | 22 |
| PpsI | GAGTC | 1 cut(s) | 22 |
| PpuMI | RGGWCCY | 1 cut(s) | 76 |
| Psp5II | RGGWCCY | 1 cut(s) | 76 |
| Psp6I | CCWGG | 1 cut(s) | 105 |
| PspGI | CCWGG | 1 cut(s) | 105 |
| PspN4I | GGNNCC | 1 cut(s) | 102 |
| PspPI | GGNCC | 1 cut(s) | 76 |
| PspPPI | RGGWCCY | 1 cut(s) | 76 |
| PstI | CTGCAG | 1 cut(s) | 88 |
| PstNI | CAGNNNCTG | 1 cut(s) | 79 |
| SalI | GTCGAC | 1 cut(s) | 25 |
| SatI | GCNGC | 1 cut(s) | 68 |
| Sau96I | GGNCC | 1 cut(s) | 76 |
| SbfI | CCTGCAGG | 1 cut(s) | 88 |
| SchI | GAGTC | 1 cut(s) | 22 |
| ScrFI | CCNGG | 1 cut(s) | 107 |
| SdaI | CCTGCAGG | 1 cut(s) | 88 |
| SduI | GDGCHC | 1 cut(s) | 105 |
| SetI | ASST | 2 cut(s) | 26, 81 |
| SfaNI | GCATC | 1 cut(s) | 140 |
| SfcI | CTRYAG | 1 cut(s) | 84 |
| SinI | GGWCC | 1 cut(s) | 76 |
| SmlI | CTYRAG | 1 cut(s) | 212 |
| SmoI | CTYRAG | 1 cut(s) | 212 |
| Sse8387I | CCTGCAGG | 1 cut(s) | 88 |
| SsiI | CCGC | 1 cut(s) | 96 |
| StyD4I | CCNGG | 1 cut(s) | 105 |
| TaiI | ACGT | 1 cut(s) | 26 |
| TaqI | TCGA | 1 cut(s) | 26 |
| TseI | GCWGC | 1 cut(s) | 67 |
| VpaK11BI | GGWCC | 1 cut(s) | 76 |
| XmiI | GTMKAC | 1 cut(s) | 26 |
| ZraI | GACGTC | 1 cut(s) | 24 |