Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr04

Orthogroup ID

OG0008962

Physical Location & Seq

Genomic Coordinates Reverse (-)

28134193 .. 28138829

Gene Structure 4637 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD04G1192100.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1599 bp

ATGTCTCTGCGGCCGGGCACGCGCACGGATGTGCGGAAGAAATCGTACAAAACGGGGGTGGACGCGGAGGAGGCGCGGCGGAGGAGAGAGGACAACTTGGTGGAGATCAGGAAGAACAAGCGGGAGGACAGTTTGCTCAAGAAGAGGAGGGAAGGGTTGAGTCAGTCCCAGCAGCAGCTGCTTGATGGCTCCCAATCCGCCGTCGTTTTGGAGAAGAGGTTGGAAAGTATCCCCGCACTAGTGCAAGGAGTTTGGTCTGATGATCCCGCACTGCAATTGGAGGCTACTACTCAATTTAGGAAGCTATTATCAATTGAACGCAGCCCTCCTATTGATGAGGTTTTAAAAGCAGGTGCTGTCCCTCGGTTTGTTGAGTTTCTTGGAAGACATGATTTGCCCCAACTGCAATTTGAAGCCGCGTGGGCTTTGACCAATGTTGCATCTGGAACATCAGAGCATACACGAGTCGTTATTGAGCATGGTGCGGTCCCAATGTTTGTGCAGCTTCTTAGCGCTGGCAGTGACGATGTCAGAGAGCAGGCAGTATGGGCTCTAGGCAACGTTGCTGGTGACTCACCAAACTGCAGGGATCTTGTTCTTGGACAAGGTGCACTGATGCCATTGCTAGCTCAGTTAAATGAAAATTCAAAGTTATCCATGATGAGGAATGCTACTTGGACTCTATCTAACTTTTGTCGTGGAAAACCACCAACCCTGTTTGATCAGGTGAAGCCTGCCTTGCCATTTTTAAAACATCTTATTCACTTGAATGATGAAGAAGTCTTGACAGACGCTTGCTGGGCCCTATCCTATCTCTCAGATGGTTCAAATGACAAAATTCAGGCTGTGATTGACGCAGGTGTCTGTCCACGACTTGTGGAGCTTCTGCTTCATCCATCACCTACACTTCTTATACCTGCTCTTCGGACAGTGGGTAATATTGTCACTGGTGATGATTCCCAGACTCAGTATGCTATTGACAACCAAGTTCTCAGTTGCCTCAATCAACTTCTCACACAAAGTCACAAAAAGAGCATCAAGAAAGAAGCTTGTTGGACGATTTCAAATATCACAGCCGGGAATAGAGGTCAAATACAGGCTGTGATAGATGCTGGTATCATCATCCCACTTGTGCAACTTCTCCAAAATGCAGAGTTCGACATAAAAAAGGAGGCTGCATGGGCTATCTCAAATGCCACTTCTGGAGGATCTCATGAACAAATACAATTCTTGGTGGCCCAAGGTTGTATTAAACCGCTTTGCGATCTTCTAATCTGCCCGGATCCAAGGATTGTAACAGTGTGCCTTGAAGGTCTTGAGAACATTCTGAAGGTGGGTGAGGCTGACAAAGAAATGGGAATGAATGGCGGGATCAATCTTTATGCACAACTCATCGATGAATGCGAGGGGTCGGATAAGATTGAGAATCTGCAGACACATGATAACCATGAAATTTACGAGAAGGCTGTCAAGCTCTTGGAGAGATATTGGACCGAGGAAGATGAGGAAGTCCAGGAGAATGGGAATGGAACTCAACAAGGTTTTACTTTCGGAACAAACCAGCCCAACCCTCCCCCAGGCGGCTTCACTTTTGGATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005048 GO:0005215 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005635 GO:0005643 GO:0005654 GO:0005737 GO:0005829 GO:0006606 GO:0006607 GO:0006810 GO:0006886 GO:0006913 GO:0008104 GO:0008139 GO:0008150 GO:0008565 GO:0009605 GO:0009607 GO:0009608 GO:0012505 GO:0015031 GO:0015833 GO:0017038 GO:0030581 GO:0031967 GO:0031974 GO:0031975 GO:0031981 GO:0032991 GO:0033036 GO:0033218 GO:0033365 GO:0034504 GO:0034613 GO:0042277 GO:0042886 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044403 GO:0044419 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044464 GO:0044766 GO:0045184 GO:0046907 GO:0050896 GO:0051169 GO:0051170 GO:0051179 GO:0051234 GO:0051641 GO:0051649 GO:0051701 GO:0051704 GO:0051707 GO:0051708 GO:0070013 GO:0070727 GO:0071702 GO:0071705 GO:0072594 GO:0080034 GO:1902579 GO:1902581 GO:1902583

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Arm Arm_3 IBB

Protein Analysis

533

Amino Acids

58.69

Weight (kDa)

5.17

Isoelectric Point (pI)

42.66

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
IBB	PF01749	12 - 97	6e-24	Importin beta binding domain
Arm	PF00514	108 - 148	8.7e-09	Armadillo/beta-catenin-like repeat
HEAT_EZ	PF13513	133 - 188	3e-08	HEAT-like repeat
Arm	PF00514	151 - 189	1.6e-11	Armadillo/beta-catenin-like repeat
Arm	PF00514	276 - 315	4.8e-09	Armadillo/beta-catenin-like repeat
ARM_ARMC5	PF24768	283 - 470	6.4e-08	ARMC5
Arm	PF00514	319 - 359	5.1e-07	Armadillo/beta-catenin-like repeat
Arm	PF00514	361 - 400	2.7e-12	Armadillo/beta-catenin-like repeat
Arm	PF00514	404 - 443	2.5e-07	Armadillo/beta-catenin-like repeat
Arm_3	PF16186	459 - 506	2.2e-20	Atypical Arm repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008962)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G09270 AT1G09270 AT1G09270
fragaria_vesca	FvH4_6g07760
malus_domestica	MD04G1192100.v1.1 MD12G1204400.v1.1
prunus_persica	Prupe.6G310800_v2.0.a1 Prupe.6G310800_v2.0.a1 Prupe.6G310800_v2.0.a1 Prupe.6G310800_v2.0.a1
pyrus_communis	pycom04g16960 pycom12g19180
rosa_chinensis	RchiOBHm_Chr3g0457481
rosa_laevigata	RLG00000025220
rosa_multiflora	Rmu_sc0008973.1_g000001
rosa_roxburghii	Rroxscaffold_6G00421840
rosa_rugosa	Rorug03G0020400
rosa_samantha	Rh3AG081100 Rh3BG083200 Rh3CG083400 Rh3DG084600
rosa_wichuraiana	Rw3G006950

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	2 cut(s)	341, 848
AasI	GACNNNNNNGTC	1 cut(s)	860
Acc36I	ACCTGC	3 cut(s)	341, 848, 925
AccII	CGCG	4 cut(s)	22, 65, 76, 419
AclI	AACGTT	1 cut(s)	561
AclWI	GGATC	6 cut(s)	257, 597, 1216, 1277, 1290, 1379
AcoI	YGGCCR	1 cut(s)	11
AcsI	RAATTY	3 cut(s)	643, 837, 1452
AcuI	CTGAAG	1 cut(s)	1349
AfaI	GTAC	1 cut(s)	47
AfeI	AGCGCT	1 cut(s)	514
AfiI	CCNNNNNNNGG	3 cut(s)	663, 1577, 1580
AgsI	TTSAA	7 cut(s)	317, 413, 648, 769, 828, 1065, 1310
AhlI	ACTAGT	1 cut(s)	238
AjnI	CCWGG	2 cut(s)	1512, 1576
AleI	CACNNNNGTG	1 cut(s)	29
AluBI	AGCT	7 cut(s)	178, 304, 505, 629, 883, 1049, 1474
AluI	AGCT	7 cut(s)	178, 304, 505, 629, 883, 1049, 1474
Alw21I	GWGCWC	1 cut(s)	613
Alw26I	GTCTC	1 cut(s)	9
Alw44I	GTGCAC	1 cut(s)	609
AlwI	GGATC	6 cut(s)	257, 597, 1216, 1277, 1290, 1379
AlwNI	CAGNNNCTG	2 cut(s)	178, 356
Aor51HI	AGCGCT	1 cut(s)	514
AoxI	GGCC	3 cut(s)	11, 801, 1236
ApaI	GGGCCC	1 cut(s)	805
ApaLI	GTGCAC	1 cut(s)	609
ApeKI	GCWGC	6 cut(s)	172, 175, 178, 321, 502, 1175
ApoI	RAATTY	3 cut(s)	643, 837, 1452
AspLEI	GCGC	3 cut(s)	24, 76, 515
AspS9I	GGNCC	5 cut(s)	487, 801, 802, 1237, 1491
AsuC2I	CCSGG	3 cut(s)	15, 1078, 1280
AsuHPI	GGTGA	6 cut(s)	567, 581, 739, 891, 962, 1349
AsuNHI	GCTAGC	1 cut(s)	625
AvaII	GGWCC	2 cut(s)	487, 1491
BaeGI	GKGCMC	3 cut(s)	20, 613, 805
BamHI	GGATCC	1 cut(s)	1282
BanII	GRGCYC	2 cut(s)	553, 805
BarI	GAAGNNNNNNTAC	2 cut(s)	29, 61
BauI	CACGAG	1 cut(s)	462
BbsI	GAAGAC	1 cut(s)	391
Bbv12I	GWGCWC	1 cut(s)	613
BbvI	GCAGC	6 cut(s)	165, 184, 187, 333, 514, 1162
BccI	CCATC	3 cut(s)	179, 815, 904
BceAI	ACGGC	1 cut(s)	185
BciT130I	CCWGG	2 cut(s)	1514, 1578
BciVI	GTATCC	1 cut(s)	239
BclI	TGATCA	1 cut(s)	721
BcnI	CCSGG	3 cut(s)	15, 1078, 1280
BcoDI	GTCTC	1 cut(s)	9
BcuI	ACTAGT	1 cut(s)	238
BfaI	CTAG	3 cut(s)	239, 554, 626
BfmI	CTRYAG	2 cut(s)	583, 1430
BfoI	RGCGCY	1 cut(s)	516
BfuAI	ACCTGC	3 cut(s)	341, 848, 925
BfuI	GTATCC	1 cut(s)	239
BglI	GCCNNNNNGGC	1 cut(s)	422
Bme1390I	CCNGG	5 cut(s)	15, 1078, 1280, 1514, 1578
Bme18I	GGWCC	2 cut(s)	487, 1491
BmgT120I	GGNCC	5 cut(s)	487, 801, 802, 1237, 1491
BmiI	GGNNCC	4 cut(s)	190, 489, 803, 1284
BmrFI	CCNGG	5 cut(s)	15, 1078, 1280, 1514, 1578
BmsI	GCATC	4 cut(s)	449, 606, 1044, 1099
BmtI	GCTAGC	1 cut(s)	629
BpiI	GAAGAC	1 cut(s)	391
BpmI	CTGGAG	1 cut(s)	1224
BpuEI	CTTGAG	2 cut(s)	122, 1337
BpuMI	CCSGG	3 cut(s)	15, 1078, 1280
Bsa29I	ATCGAT	1 cut(s)	1395
BsaJI	CCNNGG	5 cut(s)	362, 1240, 1286, 1494, 1576
BsaXI	ACNNNNNCTCC	2 cut(s)	203, 233
Bsc4I	CCNNNNNNNGG	3 cut(s)	663, 1577, 1580
Bse1I	ACTGG	1 cut(s)	952
Bse3DI	GCAATG	1 cut(s)	620
BseBI	CCWGG	2 cut(s)	1514, 1578
BseCI	ATCGAT	1 cut(s)	1395
BseDI	CCNNGG	5 cut(s)	362, 1240, 1286, 1494, 1576
BseGI	GGATG	3 cut(s)	34, 892, 1122
BseLI	CCNNNNNNNGG	3 cut(s)	663, 1577, 1580
BseMI	GCAATG	1 cut(s)	620
BseMII	CTCAG	4 cut(s)	644, 831, 980, 1006
BseNI	ACTGG	1 cut(s)	952
BseRI	GAGGAG	3 cut(s)	83, 97, 160
BseSI	GKGCMC	3 cut(s)	20, 613, 805
BseX3I	CGGCCG	1 cut(s)	11
BseXI	GCAGC	6 cut(s)	165, 184, 187, 333, 514, 1162
BseYI	CCCAGC	2 cut(s)	168, 798
BsgI	GTGCAG	1 cut(s)	521
Bsh1236I	CGCG	4 cut(s)	22, 65, 76, 419
Bsh1285I	CGRYCG	1 cut(s)	14
BshFI	GGCC	3 cut(s)	13, 803, 1238
BshVI	ATCGAT	1 cut(s)	1395
BsiEI	CGRYCG	1 cut(s)	14
BsiHKAI	GWGCWC	1 cut(s)	613
BsiSI	CCGG	3 cut(s)	14, 1077, 1280
BslFI	GGGAC	3 cut(s)	151, 344, 473
BslI	CCNNNNNNNGG	3 cut(s)	663, 1577, 1580
BsmAI	GTCTC	1 cut(s)	9
BsmFI	GGGAC	3 cut(s)	151, 344, 473
BsmI	GAATGC	2 cut(s)	673, 1406
BsnI	GGCC	3 cut(s)	13, 803, 1238
Bsp120I	GGGCCC	1 cut(s)	801
Bsp1286I	GDGCHC	4 cut(s)	20, 553, 613, 805
Bsp143I	GATC	8 cut(s)	105, 262, 589, 721, 1208, 1264, 1282, 1371
BspANI	GGCC	3 cut(s)	13, 803, 1238
BspCNI	CTCAG	4 cut(s)	643, 830, 979, 1005
BspDI	ATCGAT	1 cut(s)	1395
BspFNI	CGCG	4 cut(s)	22, 65, 76, 419
BspHI	TCATGA	1 cut(s)	1213
BspLI	GGNNCC	4 cut(s)	190, 489, 803, 1284
BspMAI	CTGCAG	2 cut(s)	587, 1434
BspMI	ACCTGC	3 cut(s)	341, 848, 925
BspOI	GCTAGC	1 cut(s)	629
BspPI	GGATC	6 cut(s)	257, 597, 1216, 1277, 1290, 1379
BspQI	GCTCTTC	1 cut(s)	927
BsrDI	GCAATG	1 cut(s)	620
BsrI	ACTGG	1 cut(s)	952
BssECI	CCNNGG	5 cut(s)	362, 1240, 1286, 1494, 1576
BssMI	GATC	8 cut(s)	105, 262, 589, 721, 1208, 1264, 1282, 1371
BssSI	CACGAG	1 cut(s)	462
BssT1I	CCWWGG	2 cut(s)	1240, 1286
Bst2BI	CACGAG	1 cut(s)	462
Bst2UI	CCWGG	2 cut(s)	1514, 1578
Bst4CI	ACNGT	3 cut(s)	131, 931, 1300
Bst6I	CTCTTC	3 cut(s)	137, 209, 927
BstAPI	GCANNNNNTGC	1 cut(s)	178
BstC8I	GCNNGC	6 cut(s)	20, 517, 540, 627, 735, 796
BstDEI	CTNAG	5 cut(s)	509, 630, 817, 966, 992
BstENI	CCTNNNNNAGG	1 cut(s)	1575
BstF5I	GGATG	3 cut(s)	34, 892, 1122
BstFNI	CGCG	4 cut(s)	22, 65, 76, 419
BstH2I	RGCGCY	1 cut(s)	516
BstHHI	GCGC	3 cut(s)	24, 76, 515
BstKTI	GATC	8 cut(s)	108, 265, 592, 724, 1211, 1267, 1285, 1374
BstMAI	GTCTC	1 cut(s)	9
BstMBI	GATC	8 cut(s)	105, 262, 589, 721, 1208, 1264, 1282, 1371
BstMCI	CGRYCG	1 cut(s)	14
BstMWI	GCNNNNNNNGC	9 cut(s)	19, 71, 178, 403, 422, 548, 739, 800, 1181
BstNI	CCWGG	2 cut(s)	1514, 1578
BstSCI	CCNGG	5 cut(s)	13, 1076, 1278, 1512, 1576
BstSFI	CTRYAG	2 cut(s)	583, 1430
BstSLI	GKGCMC	3 cut(s)	20, 613, 805
BstUI	CGCG	4 cut(s)	22, 65, 76, 419
BstV1I	GCAGC	6 cut(s)	165, 184, 187, 333, 514, 1162
BstV2I	GAAGAC	1 cut(s)	391
BstX2I	RGATCY	3 cut(s)	589, 1208, 1282
BstXI	CCANNNNNNTGG	1 cut(s)	1520
BstYI	RGATCY	3 cut(s)	589, 1208, 1282
BstZI	CGGCCG	1 cut(s)	11
Bsu15I	ATCGAT	1 cut(s)	1395
BsuI	GTATCC	1 cut(s)	239
BsuRI	GGCC	3 cut(s)	13, 803, 1238
BsuTUI	ATCGAT	1 cut(s)	1395
BtsCI	GGATG	3 cut(s)	34, 892, 1122
BtsI	GCAGTG	2 cut(s)	269, 526
BtsIMutI	CAGTG	6 cut(s)	269, 526, 611, 936, 945, 1305
BveI	ACCTGC	3 cut(s)	341, 848, 925
Cac8I	GCNNGC	6 cut(s)	20, 517, 540, 627, 735, 796
CaiI	CAGNNNCTG	2 cut(s)	178, 356
CciI	TCATGA	1 cut(s)	1213
CfoI	GCGC	3 cut(s)	24, 76, 515
Cfr13I	GGNCC	5 cut(s)	487, 801, 802, 1237, 1491
ClaI	ATCGAT	1 cut(s)	1395
CseI	GACGC	3 cut(s)	71, 800, 863
Csp6I	GTAC	1 cut(s)	46
CviAII	CATG	7 cut(s)	389, 479, 658, 1179, 1214, 1439, 1448
CviQI	GTAC	1 cut(s)	46
DdeI	CTNAG	5 cut(s)	509, 630, 817, 966, 992
DpnI	GATC	8 cut(s)	107, 264, 591, 723, 1210, 1266, 1284, 1373
DpnII	GATC	8 cut(s)	105, 262, 589, 721, 1208, 1264, 1282, 1371
DraI	TTTAAA	2 cut(s)	345, 750
DrdI	GACNNNNNNGTC	1 cut(s)	860
DseDI	GACNNNNNNGTC	1 cut(s)	860
EaeI	YGGCCR	1 cut(s)	11
EagI	CGGCCG	1 cut(s)	11
Eam1104I	CTCTTC	3 cut(s)	137, 209, 927
EarI	CTCTTC	3 cut(s)	137, 209, 927
EciI	GGCGGA	2 cut(s)	94, 187
EclXI	CGGCCG	1 cut(s)	11
Eco130I	CCWWGG	2 cut(s)	1240, 1286
Eco24I	GRGCYC	2 cut(s)	553, 805
Eco47I	GGWCC	2 cut(s)	487, 1491
Eco47III	AGCGCT	1 cut(s)	514
Eco52I	CGGCCG	1 cut(s)	11
Eco57I	CTGAAG	1 cut(s)	1349
EcoNI	CCTNNNNNAGG	1 cut(s)	1575
EcoO109I	RGGNCCY	1 cut(s)	802
EcoRII	CCWGG	2 cut(s)	1512, 1576
EcoT14I	CCWWGG	2 cut(s)	1240, 1286
EcoT38I	GRGCYC	2 cut(s)	553, 805
ErhI	CCWWGG	2 cut(s)	1240, 1286
FaeI	CATG	7 cut(s)	392, 482, 661, 1182, 1217, 1442, 1451
FalI	AAGNNNNNCTT	2 cut(s)	722, 754
FaqI	GGGAC	3 cut(s)	151, 344, 473
FatI	CATG	7 cut(s)	388, 478, 657, 1178, 1213, 1438, 1447
FauI	CCCGC	4 cut(s)	114, 241, 274, 1361
FbaI	TGATCA	1 cut(s)	721
FokI	GGATG	3 cut(s)	41, 879, 1109
FriOI	GRGCYC	2 cut(s)	553, 805
FspBI	CTAG	3 cut(s)	239, 554, 626
GlaI	GCGC	3 cut(s)	23, 75, 514
GsaI	CCCAGC	2 cut(s)	172, 802
GsuI	CTGGAG	1 cut(s)	1224
HaeII	RGCGCY	1 cut(s)	516
HaeIII	GGCC	3 cut(s)	13, 803, 1238
HapII	CCGG	3 cut(s)	14, 1077, 1280
HgaI	GACGC	3 cut(s)	71, 800, 863
HhaI	GCGC	3 cut(s)	24, 76, 515
Hin1II	CATG	7 cut(s)	392, 482, 661, 1182, 1217, 1442, 1451
Hin6I	GCGC	3 cut(s)	22, 74, 513
HinP1I	GCGC	3 cut(s)	22, 74, 513
HindIII	AAGCTT	1 cut(s)	1047
HinfI	GANTC	7 cut(s)	160, 465, 572, 679, 956, 964, 1426
HpaII	CCGG	3 cut(s)	14, 1077, 1280
HphI	GGTGA	6 cut(s)	567, 581, 739, 891, 962, 1349
Hpy166II	GTNNAC	3 cut(s)	61, 611, 869
Hpy188I	TCNGA	8 cut(s)	259, 454, 533, 820, 927, 1329, 1414, 1553
Hpy188III	TCNNGA	8 cut(s)	109, 139, 444, 784, 1039, 1203, 1214, 1316
Hpy8I	GTNNAC	3 cut(s)	61, 611, 869
Hpy99I	CGWCG	1 cut(s)	206
HpyAV	CCTTC	4 cut(s)	146, 1304, 1324, 1456
HpyCH4III	ACNGT	3 cut(s)	131, 931, 1300
HpyCH4IV	ACGT	1 cut(s)	561
HpyF10VI	GCNNNNNNNGC	9 cut(s)	19, 71, 178, 403, 422, 548, 739, 800, 1181
HpyF3I	CTNAG	5 cut(s)	509, 630, 817, 966, 992
HpySE526I	ACGT	1 cut(s)	561
Hsp92II	CATG	7 cut(s)	392, 482, 661, 1182, 1217, 1442, 1451
HspAI	GCGC	3 cut(s)	22, 74, 513
Ksp22I	TGATCA	1 cut(s)	721
Kzo9I	GATC	8 cut(s)	105, 262, 589, 721, 1208, 1264, 1282, 1371
LguI	GCTCTTC	1 cut(s)	927
LmnI	GCTCC	2 cut(s)	194, 880
Lsp1109I	GCAGC	6 cut(s)	165, 184, 187, 333, 514, 1162
LweI	GCATC	4 cut(s)	449, 606, 1044, 1099
MaeI	CTAG	3 cut(s)	239, 554, 626
MaeII	ACGT	1 cut(s)	561
MaeIII	GTNAC	5 cut(s)	521, 569, 943, 1022, 1294
MalI	GATC	8 cut(s)	107, 264, 591, 723, 1210, 1266, 1284, 1373
MboI	GATC	8 cut(s)	105, 262, 589, 721, 1208, 1264, 1282, 1371
MboII	GAAGA	9 cut(s)	49, 124, 154, 226, 396, 788, 914, 1259, 1511
MfeI	CAATTG	2 cut(s)	275, 312
MflI	RGATCY	3 cut(s)	589, 1208, 1282
MhlI	GDGCHC	4 cut(s)	20, 553, 613, 805
MluCI	AATT	8 cut(s)	275, 293, 312, 407, 643, 837, 1226, 1452
MlyI	GAGTC	5 cut(s)	169, 474, 566, 673, 958
MmeI	TCCRAC	3 cut(s)	201, 1034, 1392
MseI	TTAA	4 cut(s)	344, 635, 749, 1251
MslI	CAYNNNNRTG	2 cut(s)	29, 768
MspA1I	CMGCKG	1 cut(s)	178
MspI	CCGG	3 cut(s)	14, 1077, 1280
MspR9I	CCNGG	5 cut(s)	15, 1078, 1280, 1514, 1578
MunI	CAATTG	2 cut(s)	275, 312
Mva1269I	GAATGC	2 cut(s)	673, 1406
MvaI	CCWGG	2 cut(s)	1514, 1578
MvnI	CGCG	4 cut(s)	22, 65, 76, 419
MwoI	GCNNNNNNNGC	9 cut(s)	19, 71, 178, 403, 422, 548, 739, 800, 1181
NciI	CCSGG	3 cut(s)	15, 1078, 1280
NdeII	GATC	8 cut(s)	105, 262, 589, 721, 1208, 1264, 1282, 1371
NheI	GCTAGC	1 cut(s)	625
NlaIII	CATG	7 cut(s)	392, 482, 661, 1182, 1217, 1442, 1451
NlaIV	GGNNCC	4 cut(s)	190, 489, 803, 1284
NmuCI	GTSAC	4 cut(s)	521, 569, 943, 1022
OliI	CACNNNNGTG	1 cut(s)	29
PagI	TCATGA	1 cut(s)	1213
PaqCI	CACCTGC	2 cut(s)	341, 848
PciSI	GCTCTTC	1 cut(s)	927
PcsI	WCGNNNNNNNCGW	1 cut(s)	1401
PctI	GAATGC	2 cut(s)	673, 1406
PfeI	GAWTC	2 cut(s)	956, 1426
PflFI	GACNNNGTC	1 cut(s)	527
PfoI	TCCNGGA	1 cut(s)	1512
PleI	GAGTC	5 cut(s)	168, 473, 566, 673, 958
PpsI	GAGTC	5 cut(s)	168, 473, 566, 673, 958
Psp1406I	AACGTT	1 cut(s)	561
Psp6I	CCWGG	2 cut(s)	1512, 1576
PspFI	CCCAGC	2 cut(s)	168, 798
PspGI	CCWGG	2 cut(s)	1512, 1576
PspN4I	GGNNCC	4 cut(s)	190, 489, 803, 1284
PspOMI	GGGCCC	1 cut(s)	801
PspPI	GGNCC	5 cut(s)	487, 801, 802, 1237, 1491
PstI	CTGCAG	2 cut(s)	587, 1434
PstNI	CAGNNNCTG	2 cut(s)	178, 356
PsuI	RGATCY	3 cut(s)	589, 1208, 1282
PsyI	GACNNNGTC	1 cut(s)	527
PvuII	CAGCTG	1 cut(s)	178
RsaI	GTAC	1 cut(s)	47
RsaNI	GTAC	1 cut(s)	46
RseI	CAYNNNNRTG	2 cut(s)	29, 768
SapI	GCTCTTC	1 cut(s)	927
SaqAI	TTAA	4 cut(s)	344, 635, 749, 1251
Sau3AI	GATC	8 cut(s)	105, 262, 589, 721, 1208, 1264, 1282, 1371
Sau96I	GGNCC	5 cut(s)	487, 801, 802, 1237, 1491
SchI	GAGTC	5 cut(s)	169, 474, 566, 673, 958
ScrFI	CCNGG	5 cut(s)	15, 1078, 1280, 1514, 1578
SduI	GDGCHC	4 cut(s)	20, 553, 613, 805
SfaNI	GCATC	4 cut(s)	449, 606, 1044, 1099
SfcI	CTRYAG	2 cut(s)	583, 1430
SinI	GGWCC	2 cut(s)	487, 1491
SmiMI	CAYNNNNRTG	2 cut(s)	29, 768
SmlI	CTYRAG	2 cut(s)	137, 1316
SmoI	CTYRAG	2 cut(s)	137, 1316
SpeI	ACTAGT	1 cut(s)	238
Sse9I	AATT	8 cut(s)	275, 293, 312, 407, 643, 837, 1226, 1452
SspI	AATATT	1 cut(s)	940
SspMI	CTAG	3 cut(s)	239, 554, 626
StyD4I	CCNGG	5 cut(s)	13, 1076, 1278, 1512, 1576
StyI	CCWWGG	2 cut(s)	1240, 1286
TaaI	ACNGT	3 cut(s)	131, 931, 1300
TaiI	ACGT	1 cut(s)	564
TaqI	TCGA	2 cut(s)	1158, 1395
TaqII	GACCGA	1 cut(s)	1508
TasI	AATT	8 cut(s)	275, 293, 312, 407, 643, 837, 1226, 1452
TauI	GCSGC	4 cut(s)	13, 79, 419, 1584
TfiI	GAWTC	2 cut(s)	956, 1426
Tru1I	TTAA	4 cut(s)	344, 635, 749, 1251
Tru9I	TTAA	4 cut(s)	344, 635, 749, 1251
TscAI	CASTG	6 cut(s)	276, 526, 618, 936, 952, 1305
TseFI	GTSAC	4 cut(s)	521, 569, 943, 1022
TseI	GCWGC	6 cut(s)	172, 175, 178, 321, 502, 1175
Tsp45I	GTSAC	4 cut(s)	521, 569, 943, 1022
TspDTI	ATGAA	7 cut(s)	654, 789, 881, 1230, 1376, 1413, 1464
TspGWI	ACGGA	1 cut(s)	41
TspRI	CASTG	6 cut(s)	276, 526, 618, 936, 952, 1305
Tth111I	GACNNNGTC	1 cut(s)	527
VneI	GTGCAC	1 cut(s)	609
VpaK11BI	GGWCC	2 cut(s)	487, 1491
XagI	CCTNNNNNAGG	1 cut(s)	1575
XapI	RAATTY	3 cut(s)	643, 837, 1452
XspI	CTAG	3 cut(s)	239, 554, 626

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.