Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr05

Orthogroup ID

OG0011922

Physical Location & Seq

Genomic Coordinates Forward (+)

38062232 .. 38067355

Gene Structure 5124 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD05G1248900.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1461 bp

ATGAGGGAGCCAGCGAGCGACGTGACGTCGGCGCCACCGCCGCCTCAGGGGTTGCTAGAGAGGCTCAAGGATTACGGCCAAGAAGACGCATTTGCCCTCTGGGACGAACTCTCCCCCGACGAACGCCAACTTCTCGTCAATGAAATCGAGAGTTTGGATCTTTCGAGAATCGATCGGATCATACGGTGTTCGCTTCGATCTCACGGGCTGCCGACGGCGGCGATTGAGCCGGTGCCGGAGAGCAATGTGTCGTCGGTGGAGGAGCGAACGCTCGAAGACAGAGAGAGGTGGTGGAAGATGGGATTGAAAGCCATCTACGAGGGAAAGTTGGGTGTCCTTCTTTTGTCCGGTGGACAGGGAACCCGGCTTGGAAGTTCAGACCCGAAGGGATGCTTCAACATTGGACTTCCCTCTGGAAAATCACTCTTTCAACTCCAAGCTGAGCGGATTTTGTGTGTCCAAAGACTAGCAGCTCAAGCTATAAATGAGGGTTCTGCTGCTCCACTGCAAATACACTGGTATATCCTGACCAGTCCATTTACTGATGAATCCACACGGAAATTTTTTGAAAGTCATAAATACTTTGGTCTCGAAGCTGACCAGGTCACCTTCTTCCAGCAAGGCACCATACCTTGTGTTTCAAAGGATGGCAGATTTATCATGGAAACTCCATACAGAGTAGCTAAGGCTCCGGATGGGAATGGAGGAGTATATTCAGCTTTAAAATCATCAAGATTATTAGAAGATATGGCTACAAGAGGAATTAAATATGTGGATTGCTATGGAGTTGACAATACACTGGTTCGTGTAGCTGATCCAACATTCTTGGGATATTTCATTGATAAAGGTGTTTCAGCTGCTGCAAAAGTTGTTCGTAAGGCATACCCACAAGAAAAGGTTGGTGTGTTTGTACGTCGAGGAAAAGGGGGACCTCTAACTGTGGTTGAATACAGTGAGATGGACTCATCTCTGGCATCTGCAATCAATCAAGAAACTGGACGTCTTCGTTTTTGTTGGAGTAATGTGTGTTTGCACATGTTTACCCTGGATTTTCTAAACCAAGTGGCAAATGGCCTTGAGAAGGATAGCATTTACCATCTTGCTGAGAAGAAAATTCCTTCGATCCATGGACAGTCAATGGGATTCAAACTAGAGCAATTCATATTTGATGCATTTCCCTACGCTCCCTCAACTGCGCTTTTTGAGGTATTGCGTGAAGAAGAGTTTGCACCAGTAAAAAATGCAAACGGGTCAAATTTTGACACTCCAGATAGTGCTAGGCTTCTTGTTCTCCGACTTCACACTCGTTGGGTAGTTGCCGCTGGCGGATTCTTAACACATTCAGTGCCTCTATATGCAACTGGTGTAGAGGTTTCACCTCTTTGTTCATACGTTGGAGAAAACCTCGAAGCTATTTGCCGCGGAAGAACCTTCCATGCCCCTTGCGAGATTACATTCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0003824 GO:0003977 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005886 GO:0006040 GO:0006047 GO:0006048 GO:0006139 GO:0006725 GO:0006793 GO:0006807 GO:0007275 GO:0008150 GO:0008152 GO:0009058 GO:0009225 GO:0009226 GO:0009553 GO:0009555 GO:0009790 GO:0009791 GO:0009793 GO:0009987 GO:0010154 GO:0016020 GO:0016740 GO:0016772 GO:0016779 GO:0018130 GO:0019276 GO:0019438 GO:0022414 GO:0032501 GO:0032502 GO:0034641 GO:0034654 GO:0044237 GO:0044238 GO:0044249 GO:0044271 GO:0044281 GO:0044424 GO:0044444 GO:0044464 GO:0046349 GO:0046483 GO:0048229 GO:0048316 GO:0048608 GO:0048731 GO:0048856 GO:0052630 GO:0055086 GO:0061458 GO:0070569 GO:0071704 GO:0071944 GO:1901135 GO:1901137 GO:1901360 GO:1901362 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00520 ko01100 ko01130 map00520 map01100 map01130

Pfam Domains

Protein Families

UDPGP

Protein Analysis

487

Amino Acids

53.93

Weight (kDa)

5.73

Isoelectric Point (pI)

41.09

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
UDPGP	PF01704	59 - 440	3.9e-40	UTP--glucose-1-phosphate uridylyltransferase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0011922)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G31070 AT2G35020
fragaria_vesca	FvH4_3g12660 FvH4_3g12660
malus_domestica	MD05G1248900.v1.1 MD10G1229400.v1.1
prunus_persica	Prupe.4G115400_v2.0.a1
pyrus_communis	pycom05g22580 pycom10g19290
rosa_chinensis	RchiOBHm_Chr5g0020631
rosa_laevigata	RLG00000032545
rosa_multiflora	Rmu_sc0005607.1_g000015
rosa_roxburghii	Rroxscaffold_1G00057660
rosa_rugosa	Rorug05G0062100
rosa_samantha	Rh5AG151800 Rh5BG151400 Rh5CG162800 Rh5DG150700
rosa_wichuraiana	Rw5G013450

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	2 cut(s)	29, 1003
AccB1I	GGYRCC	3 cut(s)	31, 232, 623
AccBSI	CCGCTC	1 cut(s)	445
AccII	CGCG	1 cut(s)	1422
AccIII	TCCGGA	1 cut(s)	691
AciI	CCGC	8 cut(s)	38, 41, 218, 445, 1320, 1326, 1420, 1422
AclWI	GGATC	4 cut(s)	165, 185, 809, 1117
AcoI	YGGCCR	1 cut(s)	76
AcsI	RAATTY	3 cut(s)	560, 1113, 1255
AcyI	GRCGYC	3 cut(s)	26, 32, 1000
AfaI	GTAC	1 cut(s)	912
AfiI	CCNNNNNNNGG	2 cut(s)	47, 1081
AflIII	ACRYGT	1 cut(s)	1035
AgsI	TTSAA	7 cut(s)	307, 397, 431, 569, 642, 947, 1147
AhdI	GACNNNNNGTC	1 cut(s)	25
AjiI	CACGTC	1 cut(s)	22
AjnI	CCWGG	2 cut(s)	600, 1044
AluBI	AGCT	9 cut(s)	440, 473, 479, 596, 683, 719, 812, 857, 1412
AluI	AGCT	9 cut(s)	440, 473, 479, 596, 683, 719, 812, 857, 1412
Alw26I	GTCTC	1 cut(s)	593
AlwI	GGATC	4 cut(s)	165, 185, 809, 1117
AlwNI	CAGNNNCTG	1 cut(s)	860
Aor13HI	TCCGGA	1 cut(s)	691
AoxI	GGCC	2 cut(s)	76, 1072
ApeKI	GCWGC	5 cut(s)	208, 470, 497, 857, 860
ApoI	RAATTY	3 cut(s)	560, 1113, 1255
AspLEI	GCGC	2 cut(s)	34, 1198
AspS9I	GGNCC	1 cut(s)	929
AsuC2I	CCSGG	1 cut(s)	364
AsuHPI	GGTGA	2 cut(s)	598, 1368
AvaII	GGWCC	1 cut(s)	929
AxyI	CCTNAGG	1 cut(s)	45
BanI	GGYRCC	3 cut(s)	31, 232, 623
BbsI	GAAGAC	3 cut(s)	90, 282, 995
BbvI	GCAGC	5 cut(s)	195, 482, 484, 844, 847
BccI	CCATC	6 cut(s)	292, 320, 641, 689, 952, 1104
BceAI	ACGGC	2 cut(s)	91, 231
BciT130I	CCWGG	2 cut(s)	602, 1046
BcnI	CCSGG	1 cut(s)	364
BcoDI	GTCTC	1 cut(s)	593
BfaI	CTAG	4 cut(s)	56, 467, 1151, 1278
BfoI	RGCGCY	1 cut(s)	35
BisI	GCNGC	9 cut(s)	41, 209, 219, 471, 498, 858, 861, 1320, 1420
BlpI	GCTNAGC	1 cut(s)	441
BlsI	GCNGC	9 cut(s)	42, 210, 220, 472, 499, 859, 862, 1321, 1421
Bme1390I	CCNGG	3 cut(s)	364, 602, 1046
Bme18I	GGWCC	1 cut(s)	929
BmeRI	GACNNNNNGTC	1 cut(s)	25
BmgBI	CACGTC	1 cut(s)	22
BmgT120I	GGNCC	1 cut(s)	929
BmiI	GGNNCC	7 cut(s)	9, 33, 234, 361, 625, 690, 930
BmrFI	CCNGG	3 cut(s)	364, 602, 1046
BmsI	GCATC	3 cut(s)	380, 983, 1159
BpiI	GAAGAC	3 cut(s)	90, 282, 995
BplI	GAGNNNNNCTC	4 cut(s)	947, 979, 1389, 1421
BpmI	CTGGAG	1 cut(s)	1251
Bpu10I	CCTNAGC	1 cut(s)	684
Bpu1102I	GCTNAGC	1 cut(s)	441
BpuEI	CTTGAG	3 cut(s)	50, 459, 1097
BpuMI	CCSGG	1 cut(s)	364
Bsa29I	ATCGAT	1 cut(s)	171
BsaHI	GRCGYC	3 cut(s)	26, 32, 1000
BsaI	GGTCTC	1 cut(s)	593
BsaJI	CCNNGG	3 cut(s)	1044, 1126, 1420
BsaWI	WCCGGW	2 cut(s)	347, 691
BsaXI	ACNNNNNCTCC	2 cut(s)	95, 125
Bsc4I	CCNNNNNNNGG	2 cut(s)	47, 1081
Bse118I	RCCGGY	1 cut(s)	229
Bse1I	ACTGG	6 cut(s)	521, 531, 804, 1000, 1232, 1366
Bse21I	CCTNAGG	1 cut(s)	45
Bse3DI	GCAATG	1 cut(s)	250
BseAI	TCCGGA	1 cut(s)	691
BseBI	CCWGG	2 cut(s)	602, 1046
BseCI	ATCGAT	1 cut(s)	171
BseDI	CCNNGG	3 cut(s)	1044, 1126, 1420
BseGI	GGATG	3 cut(s)	395, 652, 700
BseLI	CCNNNNNNNGG	2 cut(s)	47, 1081
BseMI	GCAATG	1 cut(s)	250
BseMII	CTCAG	3 cut(s)	59, 432, 1095
BseNI	ACTGG	6 cut(s)	521, 531, 804, 1000, 1232, 1366
BseRI	GAGGAG	2 cut(s)	275, 720
BseXI	GCAGC	5 cut(s)	195, 482, 484, 844, 847
Bsh1236I	CGCG	1 cut(s)	1422
Bsh1285I	CGRYCG	1 cut(s)	175
BshFI	GGCC	2 cut(s)	78, 1074
BshNI	GGYRCC	3 cut(s)	31, 232, 623
BshVI	ATCGAT	1 cut(s)	171
BsiEI	CGRYCG	1 cut(s)	175
BsiSI	CCGG	5 cut(s)	230, 236, 348, 364, 692
BslFI	GGGAC	2 cut(s)	116, 942
BslI	CCNNNNNNNGG	2 cut(s)	47, 1081
BsmAI	GTCTC	1 cut(s)	593
BsmFI	GGGAC	2 cut(s)	116, 942
BsnI	GGCC	2 cut(s)	78, 1074
Bso31I	GGTCTC	1 cut(s)	593
Bsp13I	TCCGGA	1 cut(s)	691
Bsp143I	GATC	6 cut(s)	157, 172, 177, 197, 814, 1122
Bsp1720I	GCTNAGC	1 cut(s)	441
Bsp19I	CCATGG	1 cut(s)	1126
BspACI	CCGC	8 cut(s)	38, 41, 218, 445, 1320, 1326, 1420, 1422
BspANI	GGCC	2 cut(s)	78, 1074
BspCNI	CTCAG	3 cut(s)	58, 433, 1096
BspDI	ATCGAT	1 cut(s)	171
BspEI	TCCGGA	1 cut(s)	691
BspFNI	CGCG	1 cut(s)	1422
BspLI	GGNNCC	7 cut(s)	9, 33, 234, 361, 625, 690, 930
BspPI	GGATC	4 cut(s)	165, 185, 809, 1117
BspT107I	GGYRCC	3 cut(s)	31, 232, 623
BspTNI	GGTCTC	1 cut(s)	593
BsrBI	CCGCTC	1 cut(s)	445
BsrDI	GCAATG	1 cut(s)	250
BsrFI	RCCGGY	1 cut(s)	229
BsrI	ACTGG	6 cut(s)	521, 531, 804, 1000, 1232, 1366
BssAI	RCCGGY	1 cut(s)	229
BssECI	CCNNGG	3 cut(s)	1044, 1126, 1420
BssMI	GATC	6 cut(s)	157, 172, 177, 197, 814, 1122
BssNI	GRCGYC	3 cut(s)	26, 32, 1000
BssT1I	CCWWGG	1 cut(s)	1126
Bst2UI	CCWGG	2 cut(s)	602, 1046
Bst4CI	ACNGT	4 cut(s)	186, 940, 953, 1134
Bst6I	CTCTTC	1 cut(s)	1215
BstACI	GRCGYC	3 cut(s)	26, 32, 1000
BstC8I	GCNNGC	3 cut(s)	12, 16, 1324
BstDEI	CTNAG	4 cut(s)	45, 441, 684, 1104
BstDSI	CCRYGG	2 cut(s)	1126, 1420
BstEII	GGTNACC	1 cut(s)	604
BstENI	CCTNNNNNAGG	1 cut(s)	1079
BstF5I	GGATG	3 cut(s)	395, 652, 700
BstFNI	CGCG	1 cut(s)	1422
BstH2I	RGCGCY	1 cut(s)	35
BstHHI	GCGC	2 cut(s)	34, 1198
BstKTI	GATC	6 cut(s)	160, 175, 180, 200, 817, 1125
BstMAI	GTCTC	1 cut(s)	593
BstMBI	GATC	6 cut(s)	157, 172, 177, 197, 814, 1122
BstMCI	CGRYCG	1 cut(s)	175
BstMWI	GCNNNNNNNGC	3 cut(s)	40, 61, 476
BstNI	CCWGG	2 cut(s)	602, 1046
BstNSI	RCATGY	1 cut(s)	1039
BstPI	GGTNACC	1 cut(s)	604
BstSCI	CCNGG	3 cut(s)	362, 600, 1044
BstUI	CGCG	1 cut(s)	1422
BstV1I	GCAGC	5 cut(s)	195, 482, 484, 844, 847
BstV2I	GAAGAC	3 cut(s)	90, 282, 995
BstX2I	RGATCY	1 cut(s)	157
BstYI	RGATCY	1 cut(s)	157
Bsu15I	ATCGAT	1 cut(s)	171
Bsu36I	CCTNAGG	1 cut(s)	45
BsuRI	GGCC	2 cut(s)	78, 1074
BsuTUI	ATCGAT	1 cut(s)	171
BtgI	CCRYGG	2 cut(s)	1126, 1420
BtrI	CACGTC	1 cut(s)	22
BtsCI	GGATG	3 cut(s)	395, 652, 700
BtsI	GCAGTG	1 cut(s)	503
BtsIMutI	CAGTG	5 cut(s)	503, 514, 797, 958, 1350
Cac8I	GCNNGC	3 cut(s)	12, 16, 1324
CaiI	CAGNNNCTG	1 cut(s)	860
CfoI	GCGC	2 cut(s)	34, 1198
Cfr10I	RCCGGY	1 cut(s)	229
Cfr13I	GGNCC	1 cut(s)	929
Cfr42I	CCGCGG	1 cut(s)	1423
ClaI	ATCGAT	1 cut(s)	171
CseI	GACGC	1 cut(s)	95
CsiI	ACCWGGT	1 cut(s)	600
Csp6I	GTAC	1 cut(s)	911
CviAII	CATG	4 cut(s)	661, 1036, 1127, 1436
CviQI	GTAC	1 cut(s)	911
DdeI	CTNAG	4 cut(s)	45, 441, 684, 1104
DinI	GGCGCC	1 cut(s)	33
DpnI	GATC	6 cut(s)	159, 174, 179, 199, 816, 1124
DpnII	GATC	6 cut(s)	157, 172, 177, 197, 814, 1122
DraI	TTTAAA	1 cut(s)	723
DriI	GACNNNNNGTC	1 cut(s)	25
EaeI	YGGCCR	1 cut(s)	76
Eam1104I	CTCTTC	1 cut(s)	1215
Eam1105I	GACNNNNNGTC	1 cut(s)	25
EarI	CTCTTC	1 cut(s)	1215
EciI	GGCGGA	1 cut(s)	1341
Eco130I	CCWWGG	1 cut(s)	1126
Eco31I	GGTCTC	1 cut(s)	593
Eco47I	GGWCC	1 cut(s)	929
Eco81I	CCTNAGG	1 cut(s)	45
Eco91I	GGTNACC	1 cut(s)	604
EcoNI	CCTNNNNNAGG	1 cut(s)	1079
EcoO109I	RGGNCCY	1 cut(s)	929
EcoO65I	GGTNACC	1 cut(s)	604
EcoRII	CCWGG	2 cut(s)	600, 1044
EcoT14I	CCWWGG	1 cut(s)	1126
EcoT22I	ATGCAT	1 cut(s)	1174
EgeI	GGCGCC	1 cut(s)	33
EheI	GGCGCC	1 cut(s)	33
ErhI	CCWWGG	1 cut(s)	1126
FaeI	CATG	4 cut(s)	664, 1039, 1130, 1439
FalI	AAGNNNNNCTT	2 cut(s)	377, 409
FaqI	GGGAC	2 cut(s)	116, 942
FatI	CATG	4 cut(s)	660, 1035, 1126, 1435
Fnu4HI	GCNGC	9 cut(s)	41, 209, 219, 471, 498, 858, 861, 1320, 1420
FokI	GGATG	3 cut(s)	402, 659, 707
Fsp4HI	GCNGC	9 cut(s)	41, 209, 219, 471, 498, 858, 861, 1320, 1420
FspBI	CTAG	4 cut(s)	56, 467, 1151, 1278
GlaI	GCGC	2 cut(s)	33, 1197
GluI	GCNGC	9 cut(s)	41, 209, 219, 471, 498, 858, 861, 1320, 1420
GsuI	CTGGAG	1 cut(s)	1251
HaeII	RGCGCY	1 cut(s)	35
HaeIII	GGCC	2 cut(s)	78, 1074
HapII	CCGG	5 cut(s)	230, 236, 348, 364, 692
HgaI	GACGC	1 cut(s)	95
HhaI	GCGC	2 cut(s)	34, 1198
Hin1I	GRCGYC	3 cut(s)	26, 32, 1000
Hin1II	CATG	4 cut(s)	664, 1039, 1130, 1439
Hin6I	GCGC	2 cut(s)	32, 1196
HinP1I	GCGC	2 cut(s)	32, 1196
HincII	GTYRAC	1 cut(s)	790
HindII	GTYRAC	1 cut(s)	790
HinfI	GANTC	5 cut(s)	168, 548, 962, 1143, 1329
HpaII	CCGG	5 cut(s)	230, 236, 348, 364, 692
HphI	GGTGA	2 cut(s)	598, 1368
Hpy166II	GTNNAC	3 cut(s)	353, 790, 1041
Hpy188I	TCNGA	3 cut(s)	177, 379, 1295
Hpy188III	TCNNGA	9 cut(s)	148, 165, 414, 526, 590, 692, 732, 989, 1268
Hpy8I	GTNNAC	3 cut(s)	353, 790, 1041
Hpy99I	CGWCG	6 cut(s)	23, 31, 122, 217, 256, 918
HpyAV	CCTTC	6 cut(s)	347, 379, 619, 1075, 1128, 1441
HpyCH4III	ACNGT	4 cut(s)	186, 940, 953, 1134
HpyCH4IV	ACGT	5 cut(s)	21, 26, 913, 1000, 1392
HpyCH4V	TGCA	8 cut(s)	508, 863, 980, 1033, 1172, 1229, 1244, 1358
HpyF10VI	GCNNNNNNNGC	3 cut(s)	40, 61, 476
HpyF3I	CTNAG	4 cut(s)	45, 441, 684, 1104
HpySE526I	ACGT	5 cut(s)	21, 26, 913, 1000, 1392
Hsp92I	GRCGYC	3 cut(s)	26, 32, 1000
Hsp92II	CATG	4 cut(s)	664, 1039, 1130, 1439
HspAI	GCGC	2 cut(s)	32, 1196
KasI	GGCGCC	1 cut(s)	31
Kpn2I	TCCGGA	1 cut(s)	691
KspI	CCGCGG	1 cut(s)	1423
Kzo9I	GATC	6 cut(s)	157, 172, 177, 197, 814, 1122
LmnI	GCTCC	5 cut(s)	7, 262, 505, 694, 1189
Lsp1109I	GCAGC	5 cut(s)	195, 482, 484, 844, 847
LweI	GCATC	3 cut(s)	380, 983, 1159
MabI	ACCWGGT	1 cut(s)	600
MaeI	CTAG	4 cut(s)	56, 467, 1151, 1278
MaeII	ACGT	5 cut(s)	21, 26, 913, 1000, 1392
MaeIII	GTNAC	2 cut(s)	22, 604
MalI	GATC	6 cut(s)	159, 174, 179, 199, 816, 1124
MbiI	CCGCTC	1 cut(s)	445
MboI	GATC	6 cut(s)	157, 172, 177, 197, 814, 1122
MflI	RGATCY	1 cut(s)	157
MluCI	AATT	5 cut(s)	560, 762, 1113, 1157, 1255
Mly113I	GGCGCC	1 cut(s)	32
MlyI	GAGTC	1 cut(s)	956
MmeI	TCCRAC	4 cut(s)	842, 995, 1318, 1375
Mph1103I	ATGCAT	1 cut(s)	1174
MroI	TCCGGA	1 cut(s)	691
MseI	TTAA	3 cut(s)	722, 765, 1334
MspA1I	CMGCKG	3 cut(s)	857, 1322, 1422
MspI	CCGG	5 cut(s)	230, 236, 348, 364, 692
MspR9I	CCNGG	3 cut(s)	364, 602, 1046
MvaI	CCWGG	2 cut(s)	602, 1046
MvnI	CGCG	1 cut(s)	1422
MwoI	GCNNNNNNNGC	3 cut(s)	40, 61, 476
NarI	GGCGCC	1 cut(s)	32
NciI	CCSGG	1 cut(s)	364
NcoI	CCATGG	1 cut(s)	1126
NdeII	GATC	6 cut(s)	157, 172, 177, 197, 814, 1122
NlaIII	CATG	4 cut(s)	664, 1039, 1130, 1439
NlaIV	GGNNCC	7 cut(s)	9, 33, 234, 361, 625, 690, 930
NmuCI	GTSAC	2 cut(s)	22, 604
NsiI	ATGCAT	1 cut(s)	1174
NspI	RCATGY	1 cut(s)	1039
PciI	ACATGT	1 cut(s)	1035
PfeI	GAWTC	4 cut(s)	168, 548, 1143, 1329
PflFI	GACNNNGTC	1 cut(s)	602
PkrI	GCNGC	9 cut(s)	42, 210, 220, 472, 499, 859, 862, 1321, 1421
Ple19I	CGATCG	1 cut(s)	175
PleI	GAGTC	1 cut(s)	956
PluTI	GGCGCC	1 cut(s)	35
PpsI	GAGTC	1 cut(s)	956
PpuMI	RGGWCCY	1 cut(s)	929
PscI	ACATGT	1 cut(s)	1035
Psp5II	RGGWCCY	1 cut(s)	929
Psp6I	CCWGG	2 cut(s)	600, 1044
PspEI	GGTNACC	1 cut(s)	604
PspGI	CCWGG	2 cut(s)	600, 1044
PspN4I	GGNNCC	7 cut(s)	9, 33, 234, 361, 625, 690, 930
PspPI	GGNCC	1 cut(s)	929
PspPPI	RGGWCCY	1 cut(s)	929
PstNI	CAGNNNCTG	1 cut(s)	860
PsuI	RGATCY	1 cut(s)	157
PsyI	GACNNNGTC	1 cut(s)	602
PvuI	CGATCG	1 cut(s)	175
PvuII	CAGCTG	1 cut(s)	857
RsaI	GTAC	1 cut(s)	912
RsaNI	GTAC	1 cut(s)	911
SacII	CCGCGG	1 cut(s)	1423
SaqAI	TTAA	3 cut(s)	722, 765, 1334
SatI	GCNGC	9 cut(s)	41, 209, 219, 471, 498, 858, 861, 1320, 1420
Sau3AI	GATC	6 cut(s)	157, 172, 177, 197, 814, 1122
Sau96I	GGNCC	1 cut(s)	929
SchI	GAGTC	1 cut(s)	956
ScrFI	CCNGG	3 cut(s)	364, 602, 1046
SexAI	ACCWGGT	1 cut(s)	600
SfaNI	GCATC	3 cut(s)	380, 983, 1159
SfoI	GGCGCC	1 cut(s)	33
Sfr303I	CCGCGG	1 cut(s)	1423
SgrBI	CCGCGG	1 cut(s)	1423
SinI	GGWCC	1 cut(s)	929
SmlI	CTYRAG	3 cut(s)	65, 474, 1076
SmoI	CTYRAG	3 cut(s)	65, 474, 1076
Sse9I	AATT	5 cut(s)	560, 762, 1113, 1157, 1255
SsiI	CCGC	8 cut(s)	38, 41, 218, 445, 1320, 1326, 1420, 1422
SspDI	GGCGCC	1 cut(s)	31
SspMI	CTAG	4 cut(s)	56, 467, 1151, 1278
StyD4I	CCNGG	3 cut(s)	362, 600, 1044
StyI	CCWWGG	1 cut(s)	1126
TaaI	ACNGT	4 cut(s)	186, 940, 953, 1134
TaiI	ACGT	5 cut(s)	24, 29, 916, 1003, 1395
TaqI	TCGA	9 cut(s)	147, 164, 171, 196, 273, 591, 916, 1121, 1407
TasI	AATT	5 cut(s)	560, 762, 1113, 1157, 1255
TauI	GCSGC	4 cut(s)	43, 221, 1322, 1422
TfiI	GAWTC	4 cut(s)	168, 548, 1143, 1329
Tru1I	TTAA	3 cut(s)	722, 765, 1334
Tru9I	TTAA	3 cut(s)	722, 765, 1334
TscAI	CASTG	5 cut(s)	510, 521, 804, 958, 1350
TseFI	GTSAC	2 cut(s)	22, 604
TseI	GCWGC	5 cut(s)	208, 470, 497, 857, 860
Tsp45I	GTSAC	2 cut(s)	22, 604
TspDTI	ATGAA	5 cut(s)	156, 561, 826, 1150, 1377
TspGWI	ACGGA	1 cut(s)	571
TspRI	CASTG	5 cut(s)	510, 521, 804, 958, 1350
Tth111I	GACNNNGTC	1 cut(s)	602
VpaK11BI	GGWCC	1 cut(s)	929
XagI	CCTNNNNNAGG	1 cut(s)	1079
XapI	RAATTY	3 cut(s)	560, 1113, 1255
XceI	RCATGY	1 cut(s)	1039
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1067
XspI	CTAG	4 cut(s)	56, 467, 1151, 1278
ZraI	GACGTC	2 cut(s)	27, 1001
Zsp2I	ATGCAT	1 cut(s)	1174

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.