MD05G1325800.v1.1

Protein TRANSPORT INHIBITOR RESPONSE 1-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr05
OG0020351
Physical Location & Seq
Forward (+)
45180292 .. 45183130
2839 bp
Loading structure...
UTR
Exon/CDS
Intron
MD05G1325800.v1.1.491

Sequence Viewer

Length: 1707 bp
ATGGATTCCCAAAGAAAGAAGGTTCTGGAGCAGGTCCTGAACCTGGTCACTTCACCCAAGGACCGGAGCTCCGTCTCGCTGGTCTGCAAGGACTGGTACGACGTGGAGAGACACTCTCGCCGCCACGTCTTCATCGGAAACTGCTACTCCGTGTCGCCGGAGATCGTGACCCGGCGGTTTCCCAACATCCGGAGCGTGACCCTGAAGGGGAGGCCGCGGTTCTCGGACTTCAATCTGGTGCCTCCGAATTGGGGCGGCGACGTTCGGCCGTGGCTGGATGTGTTCGCTACTGAATACCCGCAGCTCGAGGAGCTGAGGCTGAAGAGGATGACGGTGAGTGATGAGAGCCTTGAGTTCTTGGCTGCTTCTTTTGCTGACTTCAAAGCTCTGTCGCTGCTCAGCTGTGACGGGTTCAGCACCGATGGCCTTGAAGCCATTGCCACTGACTGCAAGAATTTGACTGAGCTCGACATACAGGAAAACGACATCGATGATAAAAGTGGAGACTGGTTAAGCTGCTTCCCTGAAAACTTCACATCAATGGAAATACTAAACTTTTCCTGCCTGAATTCCGATGTCGACTTCGATGCTCTTGAGAGTCTTGTAAGTAGGTGCAAATCACTGAAGGTGTTAAAGGTTAATAAAACTGTAACCTTGGACCAACTACGAAGTCTTCTCAACCATGCTCCTCAACTTCTGGAGCTAGGCACCGGCTCGTTCTGGCAAGAGCTGACACCCTCTCAGCATTCAGAACTCGAAAGAGTGTTTAGCAACTGCAAGAATTTACATGCACTCTCTGGTTTATGGCAAGCAACAGCTCTTTATCTCCCGGTTCTGTATCCTGTCTGTACGAATCTTACTTTCTTGAATTTGAGCTATGCAGCAACTTTGCAAAGTTGGGACCTTGCTAAGCTTGTTGCTAATTGTCCACATCTCCGGCGCCTTTGGGTGCTGGACACAGTGGAAGACAAAGGGTTGGAGGCTGTTGGATCAAACTGTCCTTTGCTTGAGGAACTCCGTGTTTTCCCTTCTTCTCCCGATGGAGATGATATTGTTGATGGGGTGACTGAATCTGGGTTTGTTGCTGTGTCCAATGGCTGTCCAAGACTCCGCTATGTCCTCTACTTTTGTTGGCAGATGACTAATGCCGCTGTAGCAACTGTTGCACAAAACTGCCCTGATATAACCCACTTCCGTCTCTGCATAATGACCCCAGCAAAACCAGATCACCTGACGGGTGAGCCTATGGATGAGGCTTTTGGTGCAGTGGTGAAGACTTGCGCTAAACTCGAAAGGCTTTCCGTTTCAGGTTTACTGACCGACCTTACATTTGAATACATTGGGAAATATGCCAAGAATTTGGAATACCTTTCAGTAGCCTTCGCTGGAGACAGTGATCAGGGGATGCAGTACGTGATGAATGGTTGCCCCAAGCTCAAGAAACTTGAGATACGGGACTGCCCGTTTGGGGACACAGCTTTGCTCTCAGGTTTAGAGAAATATGAATCTATGAGGTCACTTTGGATGTCAGCCTGCCTTGTGACAATGAATGCCTGTCGGTCATTGGCAAGTAAGGTGCGGAGGTTGAATGTTGAGGTGATGAAAGATGATGAAAATGGTGATGACAGTCAGGCTGATAAAGTCTATGTTTACCGTTCTATTGCCGGGCCAAGAAAGGATGCCCCGGCTTTTGTTCTCACCTTCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04075 map04075
Pfam Domains
Protein Families
F-box-like LRR_6

Protein Analysis

569

Amino Acids

63.67

Weight (kDa)

5.13

Isoelectric Point (pI)

43.93

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box_5 PF18511 6 - 42 4.1e-16 F-box
Transp_inhibit PF18791 61 - 107 1.9e-22 Transport inhibitor response 1 protein domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0020351)

Species Orthologous Gene IDs
malus_domestica MD05G1325800.v1.1 MD10G1303700.v1.1
prunus_persica Prupe.4G037200_v2.0.a1 Prupe.4G037200_v2.0.a1 Prupe.4G037400_v2.0.a1
pyrus_communis pycom05g30000

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 22
AccB1I GGYRCC 3 cut(s) 238, 707, 939
AccI GTMKAC 1 cut(s) 579
AccII CGCG 1 cut(s) 217
AccIII TCCGGA 1 cut(s) 189
AciI CCGC 9 cut(s) 121, 175, 215, 217, 255, 299, 1111, 1149, 1579
AclWI GGATC 1 cut(s) 997
AcoI YGGCCR 1 cut(s) 266
AcsI RAATTY 5 cut(s) 454, 568, 781, 868, 1357
AcuI CTGAAG 3 cut(s) 224, 341, 644
AcyI GRCGYC 1 cut(s) 940
AfaI GTAC 3 cut(s) 98, 850, 1412
AfiI CCNNNNNNNGG 6 cut(s) 43, 63, 189, 207, 251, 1468
AgsI TTSAA 6 cut(s) 232, 382, 431, 868, 1334, 1588
AjiI CACGTC 2 cut(s) 103, 127
AjnI CCWGG 1 cut(s) 42
Alw21I GWGCWC 2 cut(s) 71, 468
Alw26I GTCTC 5 cut(s) 79, 103, 498, 1202, 1383
AlwI GGATC 1 cut(s) 997
AlwNI CAGNNNCTG 1 cut(s) 37
Ama87I CYCGRG 1 cut(s) 305
Aor13HI TCCGGA 1 cut(s) 189
AoxI GGCC 4 cut(s) 212, 266, 424, 1667
ApeKI GCWGC 5 cut(s) 301, 362, 394, 516, 881
ApoI RAATTY 5 cut(s) 454, 568, 781, 868, 1357
ArsI GACNNNNNNTTYG 4 cut(s) 1313, 1345, 1448, 1480
AspLEI GCGC 2 cut(s) 942, 1283
AspS9I GGNCC 5 cut(s) 34, 61, 658, 901, 1667
AsuC2I CCSGG 4 cut(s) 172, 830, 1666, 1685
AsuHPI GGTGA 9 cut(s) 45, 346, 1075, 1220, 1250, 1282, 1609, 1631, 1690
AvaI CYCGRG 1 cut(s) 305
AvaII GGWCC 4 cut(s) 34, 61, 658, 901
BanI GGYRCC 3 cut(s) 238, 707, 939
BanII GRGCYC 2 cut(s) 71, 468
BbsI GAAGAC 4 cut(s) 121, 665, 972, 1280
Bbv12I GWGCWC 2 cut(s) 71, 468
BbvCI CCTCAGC 1 cut(s) 314
BbvI GCAGC 5 cut(s) 313, 349, 381, 503, 893
BccI CCATC 3 cut(s) 416, 1034, 1052
BceAI ACGGC 1 cut(s) 253
BcgI CGANNNNNNTGC 2 cut(s) 569, 603
BciT130I CCWGG 1 cut(s) 44
BciVI GTATCC 1 cut(s) 849
BclI TGATCA 1 cut(s) 1396
BcnI CCSGG 4 cut(s) 172, 830, 1666, 1685
BcoDI GTCTC 5 cut(s) 79, 103, 498, 1202, 1383
BfaI CTAG 1 cut(s) 704
BfmI CTRYAG 1 cut(s) 1152
BfoI RGCGCY 1 cut(s) 943
BfuAI ACCTGC 1 cut(s) 22
BfuI GTATCC 1 cut(s) 849
BisI GCNGC 9 cut(s) 121, 215, 256, 302, 363, 395, 517, 882, 1149
BlpI GCTNAGC 2 cut(s) 398, 909
BlsI GCNGC 9 cut(s) 122, 216, 257, 303, 364, 396, 518, 883, 1150
Bme1390I CCNGG 5 cut(s) 44, 172, 830, 1666, 1685
Bme18I GGWCC 4 cut(s) 34, 61, 658, 901
BmeT110I CYCGRG 1 cut(s) 305
BmgBI CACGTC 2 cut(s) 103, 127
BmgT120I GGNCC 5 cut(s) 34, 61, 658, 901, 1667
BmiI GGNNCC 4 cut(s) 240, 709, 902, 941
BmrFI CCNGG 5 cut(s) 44, 172, 830, 1666, 1685
BmsI GCATC 3 cut(s) 577, 1395, 1669
BpiI GAAGAC 4 cut(s) 121, 665, 972, 1280
BplI GAGNNNNNCTC 4 cut(s) 98, 130, 100, 132
BpmI CTGGAG 3 cut(s) 47, 719, 1407
Bpu10I CCTNAGC 1 cut(s) 314
Bpu1102I GCTNAGC 2 cut(s) 398, 909
BpuEI CTTGAG 5 cut(s) 371, 614, 1028, 1421, 1466
BpuMI CCSGG 4 cut(s) 172, 830, 1666, 1685
Bsa29I ATCGAT 1 cut(s) 489
BsaAI YACGTR 1 cut(s) 1414
BsaHI GRCGYC 1 cut(s) 940
BsaJI CCNNGG 5 cut(s) 57, 215, 269, 654, 1683
BsaWI WCCGGW 2 cut(s) 63, 189
BsaXI ACNNNNNCTCC 4 cut(s) 53, 83, 131, 161
Bsc4I CCNNNNNNNGG 6 cut(s) 43, 63, 189, 207, 251, 1468
Bse118I RCCGGY 1 cut(s) 710
Bse1I ACTGG 2 cut(s) 98, 512
Bse3DI GCAATG 1 cut(s) 435
BseAI TCCGGA 1 cut(s) 189
BseBI CCWGG 1 cut(s) 44
BseCI ATCGAT 1 cut(s) 489
BseDI CCNNGG 5 cut(s) 57, 215, 269, 654, 1683
BseGI GGATG 7 cut(s) 186, 283, 333, 1255, 1410, 1530, 1684
BseLI CCNNNNNNNGG 6 cut(s) 43, 63, 189, 207, 251, 1468
BseMI GCAATG 1 cut(s) 435
BseMII CTCAG 5 cut(s) 305, 412, 453, 755, 1500
BseNI ACTGG 2 cut(s) 98, 512
BseRI GAGGAG 2 cut(s) 323, 678
BseX3I CGGCCG 1 cut(s) 266
BseXI GCAGC 5 cut(s) 313, 349, 381, 503, 893
BseYI CCCAGC 1 cut(s) 1213
BsgI GTGCAG 1 cut(s) 1284
Bsh1236I CGCG 1 cut(s) 217
Bsh1285I CGRYCG 1 cut(s) 269
BshFI GGCC 4 cut(s) 214, 268, 426, 1669
BshNI GGYRCC 3 cut(s) 238, 707, 939
BshVI ATCGAT 1 cut(s) 489
BsiEI CGRYCG 1 cut(s) 269
BsiHKAI GWGCWC 2 cut(s) 71, 468
BsiHKCI CYCGRG 1 cut(s) 305
BsiSI CCGG 9 cut(s) 64, 158, 172, 190, 711, 830, 937, 1665, 1685
BslFI GGGAC 3 cut(s) 914, 1469, 1484
BslI CCNNNNNNNGG 6 cut(s) 43, 63, 189, 207, 251, 1468
BsmAI GTCTC 5 cut(s) 79, 103, 498, 1202, 1383
BsmBI CGTCTC 2 cut(s) 79, 1202
BsmFI GGGAC 3 cut(s) 914, 1469, 1484
BsmI GAATGC 2 cut(s) 745, 1555
BsnI GGCC 4 cut(s) 214, 268, 426, 1669
BsoBI CYCGRG 1 cut(s) 305
Bsp1286I GDGCHC 2 cut(s) 71, 468
Bsp13I TCCGGA 1 cut(s) 189
Bsp143I GATC 4 cut(s) 162, 989, 1225, 1396
Bsp1720I GCTNAGC 2 cut(s) 398, 909
BspACI CCGC 9 cut(s) 121, 175, 215, 217, 255, 299, 1111, 1149, 1579
BspANI GGCC 4 cut(s) 214, 268, 426, 1669
BspCNI CTCAG 5 cut(s) 306, 411, 454, 754, 1499
BspDI ATCGAT 1 cut(s) 489
BspEI TCCGGA 1 cut(s) 189
BspFNI CGCG 1 cut(s) 217
BspLI GGNNCC 4 cut(s) 240, 709, 902, 941
BspMI ACCTGC 1 cut(s) 22
BspPI GGATC 1 cut(s) 997
BspT107I GGYRCC 3 cut(s) 238, 707, 939
BsrDI GCAATG 1 cut(s) 435
BsrFI RCCGGY 1 cut(s) 710
BsrI ACTGG 2 cut(s) 98, 512
BssAI RCCGGY 1 cut(s) 710
BssECI CCNNGG 5 cut(s) 57, 215, 269, 654, 1683
BssMI GATC 4 cut(s) 162, 989, 1225, 1396
BssNI GRCGYC 1 cut(s) 940
BssT1I CCWWGG 2 cut(s) 57, 654
Bst2UI CCWGG 1 cut(s) 44
Bst4CI ACNGT 8 cut(s) 334, 649, 961, 998, 1162, 1394, 1628, 1655
Bst6I CTCTTC 1 cut(s) 317
BstACI GRCGYC 1 cut(s) 940
BstAPI GCANNNNNTGC 1 cut(s) 1163
BstBAI YACGTR 1 cut(s) 1414
BstC8I GCNNGC 2 cut(s) 810, 1534
BstDEI CTNAG 6 cut(s) 314, 398, 462, 741, 909, 1486
BstDSI CCRYGG 2 cut(s) 215, 269
BstF5I GGATG 7 cut(s) 186, 283, 333, 1255, 1410, 1530, 1684
BstFNI CGCG 1 cut(s) 217
BstH2I RGCGCY 1 cut(s) 943
BstHHI GCGC 2 cut(s) 942, 1283
BstKTI GATC 4 cut(s) 165, 992, 1228, 1399
BstMAI GTCTC 5 cut(s) 79, 103, 498, 1202, 1383
BstMBI GATC 4 cut(s) 162, 989, 1225, 1396
BstMCI CGRYCG 1 cut(s) 269
BstMWI GCNNNNNNNGC 6 cut(s) 310, 371, 423, 1154, 1163, 1262
BstNI CCWGG 1 cut(s) 44
BstNSI RCATGY 1 cut(s) 791
BstSCI CCNGG 5 cut(s) 42, 170, 828, 1664, 1683
BstSFI CTRYAG 1 cut(s) 1152
BstUI CGCG 1 cut(s) 217
BstV1I GCAGC 5 cut(s) 313, 349, 381, 503, 893
BstV2I GAAGAC 4 cut(s) 121, 665, 972, 1280
BstXI CCANNNNNNTGG 1 cut(s) 1360
BstZI CGGCCG 1 cut(s) 266
Bsu15I ATCGAT 1 cut(s) 489
BsuI GTATCC 1 cut(s) 849
BsuRI GGCC 4 cut(s) 214, 268, 426, 1669
BsuTUI ATCGAT 1 cut(s) 489
BtgI CCRYGG 2 cut(s) 215, 269
BtrI CACGTC 2 cut(s) 103, 127
BtsCI GGATG 7 cut(s) 186, 283, 333, 1255, 1410, 1530, 1684
BtsI GCAGTG 1 cut(s) 1272
BtsIMutI CAGTG 5 cut(s) 441, 620, 966, 1272, 1399
BveI ACCTGC 1 cut(s) 22
Cac8I GCNNGC 2 cut(s) 810, 1534
CaiI CAGNNNCTG 1 cut(s) 37
CfoI GCGC 2 cut(s) 942, 1283
Cfr10I RCCGGY 1 cut(s) 710
Cfr13I GGNCC 5 cut(s) 34, 61, 658, 901, 1667
Cfr42I CCGCGG 1 cut(s) 218
ClaI ATCGAT 1 cut(s) 489
CsiI ACCWGGT 1 cut(s) 42
Csp6I GTAC 3 cut(s) 97, 849, 1411
CviAII CATG 2 cut(s) 683, 788
CviQI GTAC 3 cut(s) 97, 849, 1411
DdeI CTNAG 6 cut(s) 314, 398, 462, 741, 909, 1486
DinI GGCGCC 1 cut(s) 941
DpnI GATC 4 cut(s) 164, 991, 1227, 1398
DpnII GATC 4 cut(s) 162, 989, 1225, 1396
EaeI YGGCCR 1 cut(s) 266
EagI CGGCCG 1 cut(s) 266
Eam1104I CTCTTC 1 cut(s) 317
EarI CTCTTC 1 cut(s) 317
Ecl136II GAGCTC 2 cut(s) 69, 466
EclXI CGGCCG 1 cut(s) 266
Eco130I CCWWGG 2 cut(s) 57, 654
Eco24I GRGCYC 2 cut(s) 71, 468
Eco47I GGWCC 4 cut(s) 34, 61, 658, 901
Eco52I CGGCCG 1 cut(s) 266
Eco53kI GAGCTC 2 cut(s) 69, 466
Eco57I CTGAAG 3 cut(s) 224, 341, 644
Eco88I CYCGRG 1 cut(s) 305
EcoICRI GAGCTC 2 cut(s) 69, 466
EcoO109I RGGNCCY 2 cut(s) 34, 901
EcoRI GAATTC 1 cut(s) 568
EcoRII CCWGG 1 cut(s) 42
EcoT14I CCWWGG 2 cut(s) 57, 654
EcoT38I GRGCYC 2 cut(s) 71, 468
EgeI GGCGCC 1 cut(s) 941
EheI GGCGCC 1 cut(s) 941
ErhI CCWWGG 2 cut(s) 57, 654
Esp3I CGTCTC 2 cut(s) 79, 1202
FaeI CATG 2 cut(s) 686, 791
FaqI GGGAC 3 cut(s) 914, 1469, 1484
FatI CATG 2 cut(s) 682, 787
FauI CCCGC 1 cut(s) 306
FbaI TGATCA 1 cut(s) 1396
FblI GTMKAC 1 cut(s) 579
Fnu4HI GCNGC 9 cut(s) 121, 215, 256, 302, 363, 395, 517, 882, 1149
FokI GGATG 7 cut(s) 173, 290, 340, 1262, 1417, 1537, 1691
FriOI GRGCYC 2 cut(s) 71, 468
Fsp4HI GCNGC 9 cut(s) 121, 215, 256, 302, 363, 395, 517, 882, 1149
FspBI CTAG 1 cut(s) 704
GlaI GCGC 2 cut(s) 941, 1282
GluI GCNGC 9 cut(s) 121, 215, 256, 302, 363, 395, 517, 882, 1149
GsaI CCCAGC 1 cut(s) 1217
GsuI CTGGAG 3 cut(s) 47, 719, 1407
HaeII RGCGCY 1 cut(s) 943
HaeIII GGCC 4 cut(s) 214, 268, 426, 1669
HapII CCGG 9 cut(s) 64, 158, 172, 190, 711, 830, 937, 1665, 1685
HhaI GCGC 2 cut(s) 942, 1283
Hin1I GRCGYC 1 cut(s) 940
Hin1II CATG 2 cut(s) 686, 791
Hin6I GCGC 2 cut(s) 940, 1281
HinP1I GCGC 2 cut(s) 940, 1281
HincII GTYRAC 1 cut(s) 580
HindII GTYRAC 1 cut(s) 580
HindIII AAGCTT 1 cut(s) 911
HinfI GANTC 6 cut(s) 5, 598, 853, 1070, 1107, 1505
HpaII CCGG 9 cut(s) 64, 158, 172, 190, 711, 830, 937, 1665, 1685
HphI GGTGA 9 cut(s) 45, 346, 1075, 1220, 1250, 1282, 1609, 1631, 1690
Hpy166II GTNNAC 4 cut(s) 580, 929, 1313, 1651
Hpy188I TCNGA 6 cut(s) 137, 226, 246, 574, 751, 1706
Hpy188III TCNNGA 9 cut(s) 26, 37, 166, 190, 593, 698, 865, 1037, 1438
Hpy8I GTNNAC 4 cut(s) 580, 929, 1313, 1651
Hpy99I CGWCG 2 cut(s) 104, 263
HpyAV CCTTC 5 cut(s) 13, 199, 619, 1038, 1390
HpyCH4III ACNGT 8 cut(s) 334, 649, 961, 998, 1162, 1394, 1628, 1655
HpyCH4IV ACGT 4 cut(s) 102, 126, 261, 1413
HpyF10VI GCNNNNNNNGC 6 cut(s) 310, 371, 423, 1154, 1163, 1262
HpyF3I CTNAG 6 cut(s) 314, 398, 462, 741, 909, 1486
HpySE526I ACGT 4 cut(s) 102, 126, 261, 1413
Hsp92I GRCGYC 1 cut(s) 940
Hsp92II CATG 2 cut(s) 686, 791
HspAI GCGC 2 cut(s) 940, 1281
KasI GGCGCC 1 cut(s) 939
Kpn2I TCCGGA 1 cut(s) 189
Ksp22I TGATCA 1 cut(s) 1396
KspI CCGCGG 1 cut(s) 218
Kzo9I GATC 4 cut(s) 162, 989, 1225, 1396
LmnI GCTCC 7 cut(s) 28, 66, 74, 192, 310, 691, 700
Lsp1109I GCAGC 5 cut(s) 313, 349, 381, 503, 893
LweI GCATC 3 cut(s) 577, 1395, 1669
MabI ACCWGGT 1 cut(s) 42
MaeI CTAG 1 cut(s) 704
MaeII ACGT 4 cut(s) 102, 126, 261, 1413
MaeIII GTNAC 8 cut(s) 46, 166, 196, 404, 649, 1063, 1515, 1540
MalI GATC 4 cut(s) 164, 991, 1227, 1398
MboI GATC 4 cut(s) 162, 989, 1225, 1396
MboII GAAGA 6 cut(s) 121, 334, 665, 977, 1023, 1285
MhlI GDGCHC 2 cut(s) 71, 468
MluCI AATT 7 cut(s) 247, 454, 568, 781, 868, 922, 1357
Mly113I GGCGCC 1 cut(s) 940
MlyI GAGTC 2 cut(s) 607, 1101
MmeI TCCRAC 2 cut(s) 957, 967
MroI TCCGGA 1 cut(s) 189
MseI TTAA 3 cut(s) 512, 632, 639
MslI CAYNNNNRTG 1 cut(s) 539
MspA1I CMGCKG 3 cut(s) 217, 402, 1151
MspI CCGG 9 cut(s) 64, 158, 172, 190, 711, 830, 937, 1665, 1685
MspR9I CCNGG 5 cut(s) 44, 172, 830, 1666, 1685
Mva1269I GAATGC 2 cut(s) 745, 1555
MvaI CCWGG 1 cut(s) 44
MvnI CGCG 1 cut(s) 217
MwoI GCNNNNNNNGC 6 cut(s) 310, 371, 423, 1154, 1163, 1262
NarI GGCGCC 1 cut(s) 940
NciI CCSGG 4 cut(s) 172, 830, 1666, 1685
NdeII GATC 4 cut(s) 162, 989, 1225, 1396
NlaIII CATG 2 cut(s) 686, 791
NlaIV GGNNCC 4 cut(s) 240, 709, 902, 941
NmuCI GTSAC 7 cut(s) 46, 166, 196, 404, 1063, 1515, 1540
NspI RCATGY 1 cut(s) 791
PaeR7I CTCGAG 1 cut(s) 305
PctI GAATGC 2 cut(s) 745, 1555
PfeI GAWTC 4 cut(s) 5, 853, 1070, 1505
PkrI GCNGC 9 cut(s) 122, 216, 257, 303, 364, 396, 518, 883, 1150
PleI GAGTC 2 cut(s) 606, 1101
PluTI GGCGCC 1 cut(s) 943
PpsI GAGTC 2 cut(s) 606, 1101
Ppu21I YACGTR 1 cut(s) 1414
PpuMI RGGWCCY 2 cut(s) 34, 901
Psp124BI GAGCTC 2 cut(s) 71, 468
Psp5II RGGWCCY 2 cut(s) 34, 901
Psp6I CCWGG 1 cut(s) 42
PspFI CCCAGC 1 cut(s) 1213
PspGI CCWGG 1 cut(s) 42
PspN4I GGNNCC 4 cut(s) 240, 709, 902, 941
PspPI GGNCC 5 cut(s) 34, 61, 658, 901, 1667
PspPPI RGGWCCY 2 cut(s) 34, 901
PspXI VCTCGAGB 1 cut(s) 305
PstNI CAGNNNCTG 1 cut(s) 37
PvuII CAGCTG 1 cut(s) 402
RsaI GTAC 3 cut(s) 98, 850, 1412
RsaNI GTAC 3 cut(s) 97, 849, 1411
RseI CAYNNNNRTG 1 cut(s) 539
SacI GAGCTC 2 cut(s) 71, 468
SacII CCGCGG 1 cut(s) 218
SalI GTCGAC 1 cut(s) 578
SaqAI TTAA 3 cut(s) 512, 632, 639
SatI GCNGC 9 cut(s) 121, 215, 256, 302, 363, 395, 517, 882, 1149
Sau3AI GATC 4 cut(s) 162, 989, 1225, 1396
Sau96I GGNCC 5 cut(s) 34, 61, 658, 901, 1667
SchI GAGTC 2 cut(s) 607, 1101
ScrFI CCNGG 5 cut(s) 44, 172, 830, 1666, 1685
SduI GDGCHC 2 cut(s) 71, 468
SexAI ACCWGGT 1 cut(s) 42
SfaNI GCATC 3 cut(s) 577, 1395, 1669
SfcI CTRYAG 1 cut(s) 1152
SfoI GGCGCC 1 cut(s) 941
Sfr274I CTCGAG 1 cut(s) 305
Sfr303I CCGCGG 1 cut(s) 218
SgrBI CCGCGG 1 cut(s) 218
SinI GGWCC 4 cut(s) 34, 61, 658, 901
SlaI CTCGAG 1 cut(s) 305
SmiMI CAYNNNNRTG 1 cut(s) 539
SmlI CTYRAG 6 cut(s) 305, 350, 593, 1007, 1436, 1445
SmoI CTYRAG 6 cut(s) 305, 350, 593, 1007, 1436, 1445
Sse9I AATT 7 cut(s) 247, 454, 568, 781, 868, 922, 1357
SsiI CCGC 9 cut(s) 121, 175, 215, 217, 255, 299, 1111, 1149, 1579
SspDI GGCGCC 1 cut(s) 939
SspMI CTAG 1 cut(s) 704
SstI GAGCTC 2 cut(s) 71, 468
StyD4I CCNGG 5 cut(s) 42, 170, 828, 1664, 1683
StyI CCWWGG 2 cut(s) 57, 654
TaaI ACNGT 8 cut(s) 334, 649, 961, 998, 1162, 1394, 1628, 1655
TaiI ACGT 4 cut(s) 105, 129, 264, 1416
TaqI TCGA 7 cut(s) 306, 468, 489, 579, 585, 756, 1290
TaqII GACCGA 2 cut(s) 1334, 1548
TasI AATT 7 cut(s) 247, 454, 568, 781, 868, 922, 1357
TauI GCSGC 4 cut(s) 123, 217, 258, 1151
TfiI GAWTC 4 cut(s) 5, 853, 1070, 1505
Tru1I TTAA 3 cut(s) 512, 632, 639
Tru9I TTAA 3 cut(s) 512, 632, 639
TscAI CASTG 5 cut(s) 448, 627, 966, 1272, 1399
TseFI GTSAC 7 cut(s) 46, 166, 196, 404, 1063, 1515, 1540
TseI GCWGC 5 cut(s) 301, 362, 394, 516, 881
Tsp45I GTSAC 7 cut(s) 46, 166, 196, 404, 1063, 1515, 1540
TspDTI ATGAA 6 cut(s) 121, 1433, 1518, 1562, 1616, 1626
TspGWI ACGGA 5 cut(s) 61, 139, 1007, 1184, 1291
TspRI CASTG 5 cut(s) 448, 627, 966, 1272, 1399
VpaK11BI GGWCC 4 cut(s) 34, 61, 658, 901
XapI RAATTY 5 cut(s) 454, 568, 781, 868, 1357
XceI RCATGY 1 cut(s) 791
XhoI CTCGAG 1 cut(s) 305
XmiI GTMKAC 1 cut(s) 579
XspI CTAG 1 cut(s) 704
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.