MD10G1303700.v1.1

Protein TRANSPORT INHIBITOR RESPONSE 1-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr10
OG0020351
Physical Location & Seq
Forward (+)
39008281 .. 39011939
3659 bp
Loading structure...
UTR
Exon/CDS
Intron
MD10G1303700.v1.1.491

Sequence Viewer

Length: 1767 bp
ATGGATCCGAAAAGGAAGAAATCCGGGTTGCACGACCCGGAAGACGAATACAGGGTCCGGTCGGTATTTCCCGACGAGGTTCTGGAGCGGGTTCTGGGCATGGTGGAGTCGGGAAAGGACCGGGGCTCGGTGTCGCTGGTGTGCAAGGACTGGTACGACGCGGAGCGGTGGTCGCGCCGCCACGTGTTTATCGGAAACTGTTACGCCACATCGCCGGAGATTGTTTCCCGGCGGTTTCGTAACATTCGGAGCGTGACCCTGAAGGGGAAGCCCCGGTTCGCGGACTTCAATCTGGTCCCCGACCATTGGGGCTCCGATGTCCGGCCGTGGGTGGAGGCGTTCGCCGCCGAGTACCCGCTGCTGGAGGAGCTCCGGCTGAAGAGGATGACGGTGACTGATGAGAGTCTGGAGATGTTGGGTGTTTGTTTTGGTGGGTTCAAAGCTCTCTCGCTTGTCAGCTGTGATGGGTTCAGCACTGATGGCCTTGCCGCCATCGCCACTCACTCCAAGAATTTGATTGAACTTGACATCCAGGAGAATCAAATTGATGAGAAAAGTGGCAGTTGGTTAGGTTGTTTCCCTGAAACATTCACGTCTTTGGAAATACTGAACTTTGCAAGCCTGAATTCCGACGTCGATTTTGATGCTCTTGAGAGGCTTGTAAAAAGGTGCATATCATTAAAGGTGTTGAAGGTTAATAAAAATGTAACCTTGGAGCAACTGCAGAGGCTTCTTACCAATGCTCCTCAACTTTTGGAGCTCGGGACCGGCTCATTTGCCGTGCAAGAGATCGCAGCCTGTCAGAATTCACAATTCTTAAGAGCATTTAGCAATTGCAAGAATTTACACACCCTCTCTGGATTATGGGAAGCAACCACTCTTTATCTCCCAGTTGTATATCCTGCATGTACTACAAATCTTACTTTCTTGAATTTGAGTTATGCTGCTGCTTTGCAAAGTTGGGACCTTGCTGAGCTTGTTGCTTATTGCCCACGTCTCCGGCGCCTTTGGGTACTGGACACAGTGGAAGACCAAGGGTTGAAGGCTGTTGGATCTAACTGTCCTTTGCTTGAGGAACTCCGTGTTTTCCCTTCTGATCCTGATGGTGATGGTATTATCCGTGGGGTGACTGAATCAGGGTTTGTTGCTGTGTCTCATGGGTGCAGAAAACTCCATTATATCCTCTACTTCTGTTGGCAGATGACTAATGCAGCTGTAGCAACCGTTGCACAAAATTGCCCCGATATCACCCACTTTCGTCTCTGCATAATGATCCCAGGGCAACCAGATTACATGACGAACGAGCCTATGGATGAGGCTTTTGGTGCAGTTGCGAAGAATTGCACTAAACTCCAACGGCTTTCAGTGTCAGGTTTATTGACTGACCATGCCTTCGAATACATTGGGAAGTACGCTAAGAATTTGGAAAAGCTTTCAGTAGCCTTCGCTGGAAAAAGTGATTTGGGGATGCAGTGTGTGCTGAAAGGTTGTCCAAAGCTCAAGAAACTTGAGATAAGGGACTGCCCGTTTGGGAATGCAGCTTTTCTCTCAGATATAGAGAAGTATGAATCCATGAGATCACTTTGGATGTCAGCCTGCAATGTGACTATAAACGCCTGCCGGTTATTGGCAAGTCAGATGCCGAGATTGAACGTTGAGGTAATGAAGGATGAAGGGGATGATGACTGTGTGGCTGATAAAGTTTATGTTTACCGTTCTGTTGCTGGGCCAAGAAGGGATGCCCCGCCTTTTGTTCTCACTTTCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04075 map04075
Pfam Domains
Protein Families
F-box-like LRR_6

Protein Analysis

589

Amino Acids

65.91

Weight (kDa)

5.76

Isoelectric Point (pI)

43.06

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box_5 PF18511 22 - 61 5.5e-18 F-box
Transp_inhibit PF18791 81 - 126 3.1e-23 Transport inhibitor response 1 protein domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0020351)

Species Orthologous Gene IDs
malus_domestica MD05G1325800.v1.1 MD10G1303700.v1.1
prunus_persica Prupe.4G037200_v2.0.a1 Prupe.4G037200_v2.0.a1 Prupe.4G037400_v2.0.a1
pyrus_communis pycom05g30000

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 636
AccB1I GGYRCC 1 cut(s) 1002
AccBSI CCGCTC 2 cut(s) 88, 166
AccII CGCG 3 cut(s) 161, 175, 281
AclI AACGTT 1 cut(s) 1653
AclWI GGATC 4 cut(s) 12, 1060, 1091, 1267
AcoI YGGCCR 1 cut(s) 323
AcsI RAATTY 6 cut(s) 511, 625, 805, 841, 931, 1420
AcuI CTGAAG 2 cut(s) 281, 398
AcvI CACGTG 1 cut(s) 184
AcyI GRCGYC 2 cut(s) 633, 1003
AfaI GTAC 5 cut(s) 155, 353, 910, 1014, 1412
AfiI CCNNNNNNNGG 8 cut(s) 127, 264, 280, 306, 321, 328, 361, 1627
AflII CTTAAG 1 cut(s) 817
AflIII ACRYGT 1 cut(s) 183
AgsI TTSAA 7 cut(s) 289, 439, 521, 691, 931, 1042, 1651
AjiI CACGTC 2 cut(s) 594, 995
AjnI CCWGG 2 cut(s) 531, 1276
AloI GAACNNNNNNTCC 2 cut(s) 513, 545
AluBI AGCT 9 cut(s) 370, 443, 459, 760, 976, 1214, 1432, 1498, 1541
AluI AGCT 9 cut(s) 370, 443, 459, 760, 976, 1214, 1432, 1498, 1541
Alw21I GWGCWC 2 cut(s) 372, 762
Alw26I GTCTC 3 cut(s) 1001, 1158, 1265
AlwI GGATC 4 cut(s) 12, 1060, 1091, 1267
Ama87I CYCGRG 1 cut(s) 761
AoxI GGCC 3 cut(s) 323, 481, 1727
ApeKI GCWGC 6 cut(s) 358, 794, 944, 947, 1211, 1538
ApoI RAATTY 6 cut(s) 511, 625, 805, 841, 931, 1420
ArsI GACNNNNNNTTYG 8 cut(s) 39, 71, 623, 655, 1376, 1408, 1511, 1543
AspLEI GCGC 2 cut(s) 177, 1005
AspS9I GGNCC 6 cut(s) 55, 118, 295, 765, 964, 1727
AsuC2I CCSGG 5 cut(s) 25, 38, 122, 229, 274
AsuHPI GGTGA 4 cut(s) 403, 1118, 1138, 1240
AsuII TTCGAA 1 cut(s) 1395
AvaI CYCGRG 1 cut(s) 761
AvaII GGWCC 5 cut(s) 55, 118, 295, 765, 964
BamHI GGATCC 1 cut(s) 4
BanI GGYRCC 1 cut(s) 1002
BanII GRGCYC 4 cut(s) 128, 314, 372, 762
BbrPI CACGTG 1 cut(s) 184
BbsI GAAGAC 2 cut(s) 48, 1035
Bbv12I GWGCWC 2 cut(s) 372, 762
BbvI GCAGC 6 cut(s) 345, 806, 931, 934, 1223, 1550
BccI CCATC 5 cut(s) 458, 473, 500, 1097, 1103
BceAI ACGGC 3 cut(s) 310, 764, 1373
BcgI CGANNNNNNTGC 2 cut(s) 626, 660
BciT130I CCWGG 2 cut(s) 533, 1278
BcnI CCSGG 5 cut(s) 25, 38, 122, 229, 274
BcoDI GTCTC 3 cut(s) 1001, 1158, 1265
BfmI CTRYAG 2 cut(s) 722, 1215
BfoI RGCGCY 1 cut(s) 1006
BfrI CTTAAG 1 cut(s) 817
BisI GCNGC 9 cut(s) 178, 345, 359, 489, 795, 945, 948, 1212, 1539
BlpI GCTNAGC 1 cut(s) 972
BlsI GCNGC 9 cut(s) 179, 346, 360, 490, 796, 946, 949, 1213, 1540
Bme1390I CCNGG 7 cut(s) 25, 38, 122, 229, 274, 533, 1278
Bme18I GGWCC 5 cut(s) 55, 118, 295, 765, 964
BmeT110I CYCGRG 1 cut(s) 761
BmgBI CACGTC 2 cut(s) 594, 995
BmgT120I GGNCC 6 cut(s) 55, 118, 295, 765, 964, 1727
BmiI GGNNCC 7 cut(s) 6, 56, 297, 313, 766, 965, 1004
BmrFI CCNGG 7 cut(s) 25, 38, 122, 229, 274, 533, 1278
BmrI ACTGGG 1 cut(s) 884
BmsI GCATC 4 cut(s) 634, 1458, 1629, 1729
BmuI ACTGGG 1 cut(s) 884
BpiI GAAGAC 2 cut(s) 48, 1035
BpmI CTGGAG 3 cut(s) 104, 383, 428
Bpu1102I GCTNAGC 1 cut(s) 972
Bpu14I TTCGAA 1 cut(s) 1395
BpuEI CTTGAG 4 cut(s) 671, 1091, 1484, 1529
BpuMI CCSGG 5 cut(s) 25, 38, 122, 229, 274
BsaAI YACGTR 1 cut(s) 184
BsaHI GRCGYC 2 cut(s) 633, 1003
BsaJI CCNNGG 8 cut(s) 121, 272, 326, 711, 1033, 1120, 1276, 1277
BsaWI WCCGGW 1 cut(s) 57
BsaXI ACNNNNNCTCC 4 cut(s) 155, 185, 727, 757
Bsc4I CCNNNNNNNGG 8 cut(s) 127, 264, 280, 306, 321, 328, 361, 1627
Bse118I RCCGGY 2 cut(s) 767, 1620
Bse1I ACTGG 3 cut(s) 155, 890, 1020
Bse3DI GCAATG 1 cut(s) 1606
BseBI CCWGG 2 cut(s) 533, 1278
BseDI CCNNGG 8 cut(s) 121, 272, 326, 711, 1033, 1120, 1276, 1277
BseGI GGATG 8 cut(s) 390, 528, 1318, 1473, 1593, 1675, 1684, 1744
BseLI CCNNNNNNNGG 8 cut(s) 127, 264, 280, 306, 321, 328, 361, 1627
BseMI GCAATG 1 cut(s) 1606
BseMII CTCAG 2 cut(s) 963, 1563
BseNI ACTGG 3 cut(s) 155, 890, 1020
BseRI GAGGAG 2 cut(s) 380, 735
BseX3I CGGCCG 1 cut(s) 323
BseXI GCAGC 6 cut(s) 345, 806, 931, 934, 1223, 1550
BseYI CCCAGC 1 cut(s) 1724
BsgI GTGCAG 2 cut(s) 1183, 1347
Bsh1236I CGCG 3 cut(s) 161, 175, 281
Bsh1285I CGRYCG 2 cut(s) 62, 326
BshFI GGCC 3 cut(s) 325, 483, 1729
BshNI GGYRCC 1 cut(s) 1002
BsiEI CGRYCG 2 cut(s) 62, 326
BsiHKAI GWGCWC 2 cut(s) 372, 762
BsiHKCI CYCGRG 1 cut(s) 761
BslFI GGGAC 4 cut(s) 281, 778, 977, 1532
BslI CCNNNNNNNGG 8 cut(s) 127, 264, 280, 306, 321, 328, 361, 1627
BsmAI GTCTC 3 cut(s) 1001, 1158, 1265
BsmBI CGTCTC 2 cut(s) 1001, 1265
BsmFI GGGAC 4 cut(s) 281, 778, 977, 1532
BsmI GAATGC 1 cut(s) 1540
BsnI GGCC 3 cut(s) 325, 483, 1729
BsoBI CYCGRG 1 cut(s) 761
Bsp119I TTCGAA 1 cut(s) 1395
Bsp1286I GDGCHC 4 cut(s) 128, 314, 372, 762
Bsp143I GATC 6 cut(s) 4, 789, 1052, 1096, 1272, 1577
Bsp1720I GCTNAGC 1 cut(s) 972
BspANI GGCC 3 cut(s) 325, 483, 1729
BspCNI CTCAG 2 cut(s) 964, 1562
BspFNI CGCG 3 cut(s) 161, 175, 281
BspLI GGNNCC 7 cut(s) 6, 56, 297, 313, 766, 965, 1004
BspMAI CTGCAG 1 cut(s) 726
BspPI GGATC 4 cut(s) 12, 1060, 1091, 1267
BspT104I TTCGAA 1 cut(s) 1395
BspT107I GGYRCC 1 cut(s) 1002
BspTI CTTAAG 1 cut(s) 817
BsrBI CCGCTC 2 cut(s) 88, 166
BsrDI GCAATG 1 cut(s) 1606
BsrFI RCCGGY 2 cut(s) 767, 1620
BsrI ACTGG 3 cut(s) 155, 890, 1020
BssAI RCCGGY 2 cut(s) 767, 1620
BssECI CCNNGG 8 cut(s) 121, 272, 326, 711, 1033, 1120, 1276, 1277
BssMI GATC 6 cut(s) 4, 789, 1052, 1096, 1272, 1577
BssNI GRCGYC 2 cut(s) 633, 1003
BssT1I CCWWGG 2 cut(s) 711, 1033
Bst2UI CCWGG 2 cut(s) 533, 1278
Bst4CI ACNGT 7 cut(s) 200, 391, 1024, 1061, 1225, 1688, 1715
Bst6I CTCTTC 1 cut(s) 374
BstACI GRCGYC 2 cut(s) 633, 1003
BstAFI CTTAAG 1 cut(s) 817
BstAPI GCANNNNNTGC 2 cut(s) 1226, 1477
BstBAI YACGTR 1 cut(s) 184
BstBI TTCGAA 1 cut(s) 1395
BstC8I GCNNGC 3 cut(s) 619, 1597, 1618
BstDEI CTNAG 3 cut(s) 972, 1416, 1549
BstDSI CCRYGG 2 cut(s) 326, 1120
BstF5I GGATG 8 cut(s) 390, 528, 1318, 1473, 1593, 1675, 1684, 1744
BstFNI CGCG 3 cut(s) 161, 175, 281
BstH2I RGCGCY 1 cut(s) 1006
BstHHI GCGC 2 cut(s) 177, 1005
BstKTI GATC 6 cut(s) 7, 792, 1055, 1099, 1275, 1580
BstMAI GTCTC 3 cut(s) 1001, 1158, 1265
BstMBI GATC 6 cut(s) 4, 789, 1052, 1096, 1272, 1577
BstMCI CGRYCG 2 cut(s) 62, 326
BstMWI GCNNNNNNNGC 9 cut(s) 172, 344, 367, 480, 494, 1217, 1226, 1325, 1477
BstNI CCWGG 2 cut(s) 533, 1278
BstNSI RCATGY 1 cut(s) 909
BstSCI CCNGG 7 cut(s) 23, 36, 120, 227, 272, 531, 1276
BstSFI CTRYAG 2 cut(s) 722, 1215
BstUI CGCG 3 cut(s) 161, 175, 281
BstV1I GCAGC 6 cut(s) 345, 806, 931, 934, 1223, 1550
BstV2I GAAGAC 2 cut(s) 48, 1035
BstX2I RGATCY 2 cut(s) 4, 1052
BstYI RGATCY 2 cut(s) 4, 1052
BstZI CGGCCG 1 cut(s) 323
BsuRI GGCC 3 cut(s) 325, 483, 1729
BtgI CCRYGG 2 cut(s) 326, 1120
BtgZI GCGATG 2 cut(s) 195, 478
BtrI CACGTC 2 cut(s) 594, 995
BtsCI GGATG 8 cut(s) 390, 528, 1318, 1473, 1593, 1675, 1684, 1744
BtsI GCAGTG 1 cut(s) 1478
BtsIMutI CAGTG 4 cut(s) 474, 1029, 1371, 1478
Cac8I GCNNGC 3 cut(s) 619, 1597, 1618
CfoI GCGC 2 cut(s) 177, 1005
Cfr10I RCCGGY 2 cut(s) 767, 1620
Cfr13I GGNCC 6 cut(s) 55, 118, 295, 765, 964, 1727
CseI GACGC 1 cut(s) 167
Csp6I GTAC 5 cut(s) 154, 352, 909, 1013, 1411
CviAII CATG 6 cut(s) 100, 906, 1157, 1294, 1388, 1573
CviQI GTAC 5 cut(s) 154, 352, 909, 1013, 1411
DdeI CTNAG 3 cut(s) 972, 1416, 1549
DinI GGCGCC 1 cut(s) 1004
DpnI GATC 6 cut(s) 6, 791, 1054, 1098, 1274, 1579
DpnII GATC 6 cut(s) 4, 789, 1052, 1096, 1272, 1577
EaeI YGGCCR 1 cut(s) 323
EagI CGGCCG 1 cut(s) 323
Eam1104I CTCTTC 1 cut(s) 374
EarI CTCTTC 1 cut(s) 374
Ecl136II GAGCTC 2 cut(s) 370, 760
EclXI CGGCCG 1 cut(s) 323
Eco130I CCWWGG 2 cut(s) 711, 1033
Eco24I GRGCYC 4 cut(s) 128, 314, 372, 762
Eco32I GATATC 1 cut(s) 1246
Eco47I GGWCC 5 cut(s) 55, 118, 295, 765, 964
Eco52I CGGCCG 1 cut(s) 323
Eco53kI GAGCTC 2 cut(s) 370, 760
Eco57I CTGAAG 2 cut(s) 281, 398
Eco72I CACGTG 1 cut(s) 184
Eco88I CYCGRG 1 cut(s) 761
EcoICRI GAGCTC 2 cut(s) 370, 760
EcoO109I RGGNCCY 1 cut(s) 964
EcoRI GAATTC 2 cut(s) 625, 805
EcoRII CCWGG 2 cut(s) 531, 1276
EcoRV GATATC 1 cut(s) 1246
EcoT14I CCWWGG 2 cut(s) 711, 1033
EcoT38I GRGCYC 4 cut(s) 128, 314, 372, 762
EgeI GGCGCC 1 cut(s) 1004
EheI GGCGCC 1 cut(s) 1004
ErhI CCWWGG 2 cut(s) 711, 1033
Esp3I CGTCTC 2 cut(s) 1001, 1265
FaeI CATG 6 cut(s) 103, 909, 1160, 1297, 1391, 1576
FaqI GGGAC 4 cut(s) 281, 778, 977, 1532
FatI CATG 6 cut(s) 99, 905, 1156, 1293, 1387, 1572
FauI CCCGC 3 cut(s) 81, 363, 1752
Fnu4HI GCNGC 9 cut(s) 178, 345, 359, 489, 795, 945, 948, 1212, 1539
FokI GGATG 8 cut(s) 397, 515, 1325, 1480, 1600, 1682, 1691, 1751
FriOI GRGCYC 4 cut(s) 128, 314, 372, 762
Fsp4HI GCNGC 9 cut(s) 178, 345, 359, 489, 795, 945, 948, 1212, 1539
GlaI GCGC 2 cut(s) 176, 1004
GluI GCNGC 9 cut(s) 178, 345, 359, 489, 795, 945, 948, 1212, 1539
GsaI CCCAGC 1 cut(s) 1728
GsuI CTGGAG 3 cut(s) 104, 383, 428
HaeII RGCGCY 1 cut(s) 1006
HaeIII GGCC 3 cut(s) 325, 483, 1729
HgaI GACGC 1 cut(s) 167
HhaI GCGC 2 cut(s) 177, 1005
Hin1I GRCGYC 2 cut(s) 633, 1003
Hin1II CATG 6 cut(s) 103, 909, 1160, 1297, 1391, 1576
Hin6I GCGC 2 cut(s) 175, 1003
HinP1I GCGC 2 cut(s) 175, 1003
HindIII AAGCTT 1 cut(s) 1430
HinfI GANTC 5 cut(s) 107, 403, 538, 1133, 1568
HphI GGTGA 4 cut(s) 403, 1118, 1138, 1240
Hpy166II GTNNAC 1 cut(s) 1711
Hpy8I GTNNAC 1 cut(s) 1711
Hpy99I CGWCG 4 cut(s) 77, 161, 635, 638
HpyAV CCTTC 9 cut(s) 256, 685, 1036, 1101, 1402, 1453, 1660, 1667, 1728
HpyCH4III ACNGT 7 cut(s) 200, 391, 1024, 1061, 1225, 1688, 1715
HpyCH4IV ACGT 5 cut(s) 183, 593, 633, 994, 1653
HpyF10VI GCNNNNNNNGC 9 cut(s) 172, 344, 367, 480, 494, 1217, 1226, 1325, 1477
HpyF3I CTNAG 3 cut(s) 972, 1416, 1549
HpySE526I ACGT 5 cut(s) 183, 593, 633, 994, 1653
Hsp92I GRCGYC 2 cut(s) 633, 1003
Hsp92II CATG 6 cut(s) 103, 909, 1160, 1297, 1391, 1576
HspAI GCGC 2 cut(s) 175, 1003
KasI GGCGCC 1 cut(s) 1002
Kzo9I GATC 6 cut(s) 4, 789, 1052, 1096, 1272, 1577
LmnI GCTCC 9 cut(s) 85, 163, 249, 317, 367, 375, 715, 748, 757
Lsp1109I GCAGC 6 cut(s) 345, 806, 931, 934, 1223, 1550
LweI GCATC 4 cut(s) 634, 1458, 1629, 1729
MaeII ACGT 5 cut(s) 183, 593, 633, 994, 1653
MaeIII GTNAC 7 cut(s) 200, 239, 253, 391, 706, 1126, 1603
MalI GATC 6 cut(s) 6, 791, 1054, 1098, 1274, 1579
MbiI CCGCTC 2 cut(s) 88, 166
MboI GATC 6 cut(s) 4, 789, 1052, 1096, 1272, 1577
MboII GAAGA 5 cut(s) 28, 53, 391, 1040, 1348
MfeI CAATTG 1 cut(s) 832
MflI RGATCY 2 cut(s) 4, 1052
MhlI GDGCHC 4 cut(s) 128, 314, 372, 762
Mly113I GGCGCC 1 cut(s) 1003
MlyI GAGTC 2 cut(s) 116, 412
MmeI TCCRAC 3 cut(s) 654, 1030, 1378
MseI TTAA 3 cut(s) 680, 696, 818
MspA1I CMGCKG 3 cut(s) 358, 459, 1214
MspCI CTTAAG 1 cut(s) 817
MspR9I CCNGG 7 cut(s) 25, 38, 122, 229, 274, 533, 1278
MunI CAATTG 1 cut(s) 832
Mva1269I GAATGC 1 cut(s) 1540
MvaI CCWGG 2 cut(s) 533, 1278
MvnI CGCG 3 cut(s) 161, 175, 281
MwoI GCNNNNNNNGC 9 cut(s) 172, 344, 367, 480, 494, 1217, 1226, 1325, 1477
NarI GGCGCC 1 cut(s) 1003
NciI CCSGG 5 cut(s) 25, 38, 122, 229, 274
NdeII GATC 6 cut(s) 4, 789, 1052, 1096, 1272, 1577
NlaIII CATG 6 cut(s) 103, 909, 1160, 1297, 1391, 1576
NlaIV GGNNCC 7 cut(s) 6, 56, 297, 313, 766, 965, 1004
NmeAIII GCCGAG 2 cut(s) 373, 1668
NmuCI GTSAC 4 cut(s) 253, 391, 1126, 1603
NspI RCATGY 1 cut(s) 909
NspV TTCGAA 1 cut(s) 1395
PasI CCCWGGG 1 cut(s) 1277
PctI GAATGC 1 cut(s) 1540
PfeI GAWTC 3 cut(s) 538, 1133, 1568
PfoI TCCNGGA 1 cut(s) 531
PkrI GCNGC 9 cut(s) 179, 346, 360, 490, 796, 946, 949, 1213, 1540
PleI GAGTC 2 cut(s) 115, 411
PluTI GGCGCC 1 cut(s) 1006
PmaCI CACGTG 1 cut(s) 184
PmlI CACGTG 1 cut(s) 184
PpsI GAGTC 2 cut(s) 115, 411
Ppu21I YACGTR 1 cut(s) 184
PpuMI RGGWCCY 1 cut(s) 964
Psp124BI GAGCTC 2 cut(s) 372, 762
Psp1406I AACGTT 1 cut(s) 1653
Psp5II RGGWCCY 1 cut(s) 964
Psp6I CCWGG 2 cut(s) 531, 1276
PspCI CACGTG 1 cut(s) 184
PspFI CCCAGC 1 cut(s) 1724
PspGI CCWGG 2 cut(s) 531, 1276
PspN4I GGNNCC 7 cut(s) 6, 56, 297, 313, 766, 965, 1004
PspPI GGNCC 6 cut(s) 55, 118, 295, 765, 964, 1727
PspPPI RGGWCCY 1 cut(s) 964
PstI CTGCAG 1 cut(s) 726
PsuI RGATCY 2 cut(s) 4, 1052
PvuII CAGCTG 2 cut(s) 459, 1214
RsaI GTAC 5 cut(s) 155, 353, 910, 1014, 1412
RsaNI GTAC 5 cut(s) 154, 352, 909, 1013, 1411
SacI GAGCTC 2 cut(s) 372, 762
SaqAI TTAA 3 cut(s) 680, 696, 818
SatI GCNGC 9 cut(s) 178, 345, 359, 489, 795, 945, 948, 1212, 1539
Sau3AI GATC 6 cut(s) 4, 789, 1052, 1096, 1272, 1577
Sau96I GGNCC 6 cut(s) 55, 118, 295, 765, 964, 1727
SchI GAGTC 2 cut(s) 116, 412
ScrFI CCNGG 7 cut(s) 25, 38, 122, 229, 274, 533, 1278
SduI GDGCHC 4 cut(s) 128, 314, 372, 762
SfaNI GCATC 4 cut(s) 634, 1458, 1629, 1729
SfcI CTRYAG 2 cut(s) 722, 1215
SfoI GGCGCC 1 cut(s) 1004
SfuI TTCGAA 1 cut(s) 1395
SinI GGWCC 5 cut(s) 55, 118, 295, 765, 964
SmlI CTYRAG 5 cut(s) 650, 817, 1070, 1499, 1508
SmoI CTYRAG 5 cut(s) 650, 817, 1070, 1499, 1508
SspDI GGCGCC 1 cut(s) 1002
SstI GAGCTC 2 cut(s) 372, 762
StyD4I CCNGG 7 cut(s) 23, 36, 120, 227, 272, 531, 1276
StyI CCWWGG 2 cut(s) 711, 1033
TaaI ACNGT 7 cut(s) 200, 391, 1024, 1061, 1225, 1688, 1715
TaiI ACGT 5 cut(s) 186, 596, 636, 997, 1656
TaqI TCGA 2 cut(s) 636, 1395
TatI WGTACW 1 cut(s) 908
TauI GCSGC 3 cut(s) 180, 347, 491
TfiI GAWTC 3 cut(s) 538, 1133, 1568
Tru1I TTAA 3 cut(s) 680, 696, 818
Tru9I TTAA 3 cut(s) 680, 696, 818
TscAI CASTG 4 cut(s) 481, 1029, 1371, 1478
TseFI GTSAC 4 cut(s) 253, 391, 1126, 1603
TseI GCWGC 6 cut(s) 358, 794, 944, 947, 1211, 1538
Tsp45I GTSAC 4 cut(s) 253, 391, 1126, 1603
TspDTI ATGAA 3 cut(s) 1581, 1679, 1686
TspGWI ACGGA 2 cut(s) 1070, 1109
TspRI CASTG 4 cut(s) 481, 1029, 1371, 1478
Vha464I CTTAAG 1 cut(s) 817
VpaK11BI GGWCC 5 cut(s) 55, 118, 295, 765, 964
XapI RAATTY 6 cut(s) 511, 625, 805, 841, 931, 1420
XceI RCATGY 1 cut(s) 909
ZraI GACGTC 1 cut(s) 634
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.