MD05G1333600.v1.1

G-type lectin S-receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr05
Physical Location & Seq
Forward (+)
45674342 .. 45675052
711 bp
Loading structure...
UTR
Exon/CDS
Intron
MD05G1333600.v1.1.491

Sequence Viewer

Length: 444 bp
ATGAACCCAAAAATATCAGATTTTGGCATAGTAAGAATGTTTGGGGATGACCAAATTGAAGCAAACACGAACAAAGTTTATGCTATGGATGGGTTATATTCCACAAAATCCGATGTGTTTAGCTTTGGATGCTTGGCACTAGAGATCATTAGTGGAAGGAAGAACAGCTTCCAATTCGAAAAGTCATCTTTGAATTTGGTTGGAATATCATATTCGACTCATGAAGTTATGAAATACATTCAGATTGGGCTTTTGTGCGTGCAAGAGTACCTAACAGACCGGCCAACCATGCTAGATGTTGTGTTCATGTTGGGGAATGAAACGATTCTTCCACATCCGAAAAAGGCAACGTTTAGCTTGAAAAACAGTGGTCTGGATTCTTCAATTTGTAAAGGTTCTTCTTTTGTAAATGATGTAACAATAATAGTTATTGAAGCTCGTTGA

Protein Analysis

148

Amino Acids

16.35

Weight (kDa)

5.63

Isoelectric Point (pI)

22.16

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0028802)

Species Orthologous Gene IDs
malus_domestica MD05G1333600.v1.1
pyrus_communis pycom05g30500

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AclI AACGTT 1 cut(s) 350
AcoI YGGCCR 1 cut(s) 281
AcsI RAATTY 1 cut(s) 193
AfaI GTAC 1 cut(s) 269
AgsI TTSAA 5 cut(s) 59, 193, 361, 384, 434
AluBI AGCT 4 cut(s) 123, 168, 357, 437
AluI AGCT 4 cut(s) 123, 168, 357, 437
AoxI GGCC 1 cut(s) 281
ApoI RAATTY 1 cut(s) 193
Asp700I GAANNNNTTC 2 cut(s) 167, 324
AsuII TTCGAA 1 cut(s) 177
BarI GAAGNNNNNNTAC 2 cut(s) 382, 414
BccI CCATC 1 cut(s) 83
BfaI CTAG 2 cut(s) 140, 293
BmsI GCATC 1 cut(s) 119
Bpu14I TTCGAA 1 cut(s) 177
Bse118I RCCGGY 1 cut(s) 279
BseGI GGATG 4 cut(s) 52, 94, 134, 334
BshFI GGCC 1 cut(s) 283
BsiSI CCGG 1 cut(s) 280
BsnI GGCC 1 cut(s) 283
Bsp119I TTCGAA 1 cut(s) 177
Bsp143I GATC 1 cut(s) 144
BspANI GGCC 1 cut(s) 283
BspHI TCATGA 1 cut(s) 220
BspT104I TTCGAA 1 cut(s) 177
BsrFI RCCGGY 1 cut(s) 279
BssAI RCCGGY 1 cut(s) 279
BssMI GATC 1 cut(s) 144
Bst4CI ACNGT 1 cut(s) 368
BstBI TTCGAA 1 cut(s) 177
BstC8I GCNNGC 1 cut(s) 260
BstF5I GGATG 4 cut(s) 52, 94, 134, 334
BstKTI GATC 1 cut(s) 147
BstMBI GATC 1 cut(s) 144
BstMWI GCNNNNNNNGC 2 cut(s) 129, 289
BsuRI GGCC 1 cut(s) 283
BtsCI GGATG 4 cut(s) 52, 94, 134, 334
BtsIMutI CAGTG 1 cut(s) 373
Cac8I GCNNGC 1 cut(s) 260
CciI TCATGA 1 cut(s) 220
Cfr10I RCCGGY 1 cut(s) 279
Csp6I GTAC 1 cut(s) 268
CviAII CATG 3 cut(s) 221, 289, 307
CviJI RGCY 6 cut(s) 123, 168, 250, 283, 357, 437
CviKI_1 RGCY 6 cut(s) 123, 168, 250, 283, 357, 437
CviQI GTAC 1 cut(s) 268
DpnI GATC 1 cut(s) 146
DpnII GATC 1 cut(s) 144
EaeI YGGCCR 1 cut(s) 281
FaeI CATG 3 cut(s) 224, 292, 310
FaiI YATR 9 cut(s) 29, 81, 86, 97, 211, 222, 230, 290, 308
FalI AAGNNNNNCTT 2 cut(s) 152, 184
FatI CATG 3 cut(s) 220, 288, 306
FokI GGATG 4 cut(s) 59, 101, 141, 321
FspBI CTAG 2 cut(s) 140, 293
HaeIII GGCC 1 cut(s) 283
HapII CCGG 1 cut(s) 280
Hin1II CATG 3 cut(s) 224, 292, 310
HinfI GANTC 3 cut(s) 217, 325, 377
HpaII CCGG 1 cut(s) 280
Hpy188I TCNGA 4 cut(s) 19, 112, 243, 339
Hpy188III TCNNGA 2 cut(s) 221, 374
HpyAV CCTTC 1 cut(s) 150
HpyCH4III ACNGT 1 cut(s) 368
HpyCH4IV ACGT 1 cut(s) 350
HpyCH4V TGCA 1 cut(s) 262
HpyF10VI GCNNNNNNNGC 2 cut(s) 129, 289
HpySE526I ACGT 1 cut(s) 350
Hsp92II CATG 3 cut(s) 224, 292, 310
Kzo9I GATC 1 cut(s) 144
LpnPI CCDG 2 cut(s) 293, 359
LweI GCATC 1 cut(s) 119
MaeI CTAG 2 cut(s) 140, 293
MaeII ACGT 1 cut(s) 350
MaeIII GTNAC 1 cut(s) 415
MalI GATC 1 cut(s) 146
MboI GATC 1 cut(s) 144
MboII GAAGA 4 cut(s) 172, 320, 372, 390
MluCI AATT 4 cut(s) 54, 173, 193, 384
MlyI GAGTC 1 cut(s) 211
MmeI TCCRAC 1 cut(s) 181
MroXI GAANNNNTTC 2 cut(s) 167, 324
MspI CCGG 1 cut(s) 280
MwoI GCNNNNNNNGC 2 cut(s) 129, 289
NdeII GATC 1 cut(s) 144
NlaIII CATG 3 cut(s) 224, 292, 310
NspV TTCGAA 1 cut(s) 177
PagI TCATGA 1 cut(s) 220
PdmI GAANNNNTTC 2 cut(s) 167, 324
PfeI GAWTC 2 cut(s) 325, 377
PleI GAGTC 1 cut(s) 211
PpsI GAGTC 1 cut(s) 211
Psp1406I AACGTT 1 cut(s) 350
RsaI GTAC 1 cut(s) 269
RsaNI GTAC 1 cut(s) 268
Sau3AI GATC 1 cut(s) 144
SchI GAGTC 1 cut(s) 211
SetI ASST 7 cut(s) 125, 170, 273, 353, 359, 397, 439
SfaNI GCATC 1 cut(s) 119
SfuI TTCGAA 1 cut(s) 177
Sse9I AATT 4 cut(s) 54, 173, 193, 384
SspMI CTAG 2 cut(s) 140, 293
TaaI ACNGT 1 cut(s) 368
TaiI ACGT 1 cut(s) 353
TaqI TCGA 2 cut(s) 177, 215
TasI AATT 4 cut(s) 54, 173, 193, 384
TfiI GAWTC 2 cut(s) 325, 377
TscAI CASTG 1 cut(s) 373
TspDTI ATGAA 5 cut(s) 17, 237, 245, 295, 333
TspRI CASTG 1 cut(s) 373
XapI RAATTY 1 cut(s) 193
XmnI GAANNNNTTC 2 cut(s) 167, 324
XspI CTAG 2 cut(s) 140, 293
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.