pycom05g30500

G-type lectin S-receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr5
Physical Location & Seq
Forward (+)
30601515 .. 30602035
521 bp
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UTR
Exon/CDS
Intron
pycom05g30500.2

Sequence Viewer

Length: 348 bp
ATGTCACCAGAGTACGCTATGGATGGGTTATATTCCACAAAATCCGATGTGTTTAGCTTTGGAGTCTTGGTACTAGAGATCATTAGTGGAAGGAAGAACAGCTTCCAATTCGAAAACTCATCTGTGAATTTGGTTGGAATAACATTCAGATTGGGCTTTTGTGTGCAAGAATACCCAACAGACCGGCCAACCATGCTAGATGTTGTGTTCATGTTGGGGAACGAAACGACTCTTCCACATCCGAAAAAGGCAGCGTTTAGCTTGAAAAACAGTGGTCCGGATTCTTCAACGCCTAAAGGAGTTTCTTTTGTAAATGATGTAACAGTAACAGTTATTGAAGCTCGTTGA

Protein Analysis

116

Amino Acids

12.62

Weight (kDa)

5.26

Isoelectric Point (pI)

30.77

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0028802)

Species Orthologous Gene IDs
malus_domestica MD05G1333600.v1.1
pyrus_communis pycom05g30500

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccIII TCCGGA 1 cut(s) 277
AcoI YGGCCR 1 cut(s) 185
AcsI RAATTY 1 cut(s) 127
AfaI GTAC 2 cut(s) 14, 72
AgsI TTSAA 3 cut(s) 265, 288, 338
AluBI AGCT 4 cut(s) 57, 102, 261, 341
AluI AGCT 4 cut(s) 57, 102, 261, 341
Aor13HI TCCGGA 1 cut(s) 277
AoxI GGCC 1 cut(s) 185
ApeKI GCWGC 1 cut(s) 251
ApoI RAATTY 1 cut(s) 127
Asp700I GAANNNNTTC 1 cut(s) 101
AspS9I GGNCC 1 cut(s) 275
AsuII TTCGAA 1 cut(s) 111
AvaII GGWCC 1 cut(s) 275
BbvI GCAGC 1 cut(s) 263
BccI CCATC 1 cut(s) 17
BfaI CTAG 2 cut(s) 74, 197
BisI GCNGC 1 cut(s) 252
BlsI GCNGC 1 cut(s) 253
Bme18I GGWCC 1 cut(s) 275
BmgT120I GGNCC 1 cut(s) 275
Bpu14I TTCGAA 1 cut(s) 111
BsaWI WCCGGW 1 cut(s) 277
BsaXI ACNNNNNCTCC 2 cut(s) 54, 84
Bse118I RCCGGY 1 cut(s) 183
BseAI TCCGGA 1 cut(s) 277
BseGI GGATG 2 cut(s) 28, 238
BseXI GCAGC 1 cut(s) 263
BshFI GGCC 1 cut(s) 187
BsiSI CCGG 2 cut(s) 184, 278
BsnI GGCC 1 cut(s) 187
Bsp119I TTCGAA 1 cut(s) 111
Bsp13I TCCGGA 1 cut(s) 277
Bsp143I GATC 1 cut(s) 78
BspANI GGCC 1 cut(s) 187
BspEI TCCGGA 1 cut(s) 277
BspT104I TTCGAA 1 cut(s) 111
BsrFI RCCGGY 1 cut(s) 183
BssAI RCCGGY 1 cut(s) 183
BssMI GATC 1 cut(s) 78
Bst4CI ACNGT 3 cut(s) 272, 325, 331
Bst6I CTCTTC 1 cut(s) 237
BstBI TTCGAA 1 cut(s) 111
BstF5I GGATG 2 cut(s) 28, 238
BstKTI GATC 1 cut(s) 81
BstMBI GATC 1 cut(s) 78
BstMWI GCNNNNNNNGC 1 cut(s) 193
BstV1I GCAGC 1 cut(s) 263
BsuRI GGCC 1 cut(s) 187
BtsCI GGATG 2 cut(s) 28, 238
BtsIMutI CAGTG 1 cut(s) 277
Cfr10I RCCGGY 1 cut(s) 183
Cfr13I GGNCC 1 cut(s) 275
Csp6I GTAC 2 cut(s) 13, 71
CviAII CATG 2 cut(s) 193, 211
CviJI RGCY 6 cut(s) 57, 102, 156, 187, 261, 341
CviKI_1 RGCY 6 cut(s) 57, 102, 156, 187, 261, 341
CviQI GTAC 2 cut(s) 13, 71
DpnI GATC 1 cut(s) 80
DpnII GATC 1 cut(s) 78
EaeI YGGCCR 1 cut(s) 185
Eam1104I CTCTTC 1 cut(s) 237
EarI CTCTTC 1 cut(s) 237
Eco47I GGWCC 1 cut(s) 275
FaeI CATG 2 cut(s) 196, 214
FaiI YATR 4 cut(s) 20, 31, 194, 212
FalI AAGNNNNNCTT 2 cut(s) 86, 118
FatI CATG 2 cut(s) 192, 210
Fnu4HI GCNGC 1 cut(s) 252
FokI GGATG 2 cut(s) 35, 225
Fsp4HI GCNGC 1 cut(s) 252
FspBI CTAG 2 cut(s) 74, 197
GluI GCNGC 1 cut(s) 252
HaeIII GGCC 1 cut(s) 187
HapII CCGG 2 cut(s) 184, 278
Hin1II CATG 2 cut(s) 196, 214
HinfI GANTC 3 cut(s) 63, 229, 281
HpaII CCGG 2 cut(s) 184, 278
Hpy188I TCNGA 3 cut(s) 46, 149, 243
Hpy188III TCNNGA 1 cut(s) 278
HpyAV CCTTC 1 cut(s) 84
HpyCH4III ACNGT 3 cut(s) 272, 325, 331
HpyCH4V TGCA 1 cut(s) 166
HpyF10VI GCNNNNNNNGC 1 cut(s) 193
Hsp92II CATG 2 cut(s) 196, 214
Kpn2I TCCGGA 1 cut(s) 277
Kzo9I GATC 1 cut(s) 78
LpnPI CCDG 3 cut(s) 21, 197, 291
Lsp1109I GCAGC 1 cut(s) 263
MaeI CTAG 2 cut(s) 74, 197
MaeIII GTNAC 3 cut(s) 3, 319, 325
MalI GATC 1 cut(s) 80
MboI GATC 1 cut(s) 78
MboII GAAGA 3 cut(s) 106, 224, 276
MluCI AATT 2 cut(s) 107, 127
MlyI GAGTC 2 cut(s) 72, 223
MmeI TCCRAC 1 cut(s) 115
MroI TCCGGA 1 cut(s) 277
MroXI GAANNNNTTC 1 cut(s) 101
MspI CCGG 2 cut(s) 184, 278
MwoI GCNNNNNNNGC 1 cut(s) 193
NdeII GATC 1 cut(s) 78
NlaIII CATG 2 cut(s) 196, 214
NmuCI GTSAC 1 cut(s) 3
NspV TTCGAA 1 cut(s) 111
PdmI GAANNNNTTC 1 cut(s) 101
PfeI GAWTC 1 cut(s) 281
PkrI GCNGC 1 cut(s) 253
PleI GAGTC 2 cut(s) 71, 223
PpsI GAGTC 2 cut(s) 71, 223
PspPI GGNCC 1 cut(s) 275
RsaI GTAC 2 cut(s) 14, 72
RsaNI GTAC 2 cut(s) 13, 71
SatI GCNGC 1 cut(s) 252
Sau3AI GATC 1 cut(s) 78
Sau96I GGNCC 1 cut(s) 275
SchI GAGTC 2 cut(s) 72, 223
SetI ASST 4 cut(s) 59, 104, 263, 343
SfuI TTCGAA 1 cut(s) 111
SinI GGWCC 1 cut(s) 275
Sse9I AATT 2 cut(s) 107, 127
SspMI CTAG 2 cut(s) 74, 197
TaaI ACNGT 3 cut(s) 272, 325, 331
TaqI TCGA 1 cut(s) 111
TasI AATT 2 cut(s) 107, 127
TfiI GAWTC 1 cut(s) 281
TscAI CASTG 1 cut(s) 277
TseFI GTSAC 1 cut(s) 3
TseI GCWGC 1 cut(s) 251
Tsp45I GTSAC 1 cut(s) 3
TspDTI ATGAA 1 cut(s) 199
TspRI CASTG 1 cut(s) 277
VpaK11BI GGWCC 1 cut(s) 275
XapI RAATTY 1 cut(s) 127
XmnI GAANNNNTTC 1 cut(s) 101
XspI CTAG 2 cut(s) 74, 197
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.