MD06G1021100.v1.1

zinc finger

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr06
Physical Location & Seq
Reverse (-)
2645950 .. 2647383
1434 bp
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UTR
Exon/CDS
Intron
MD06G1021100.v1.1.491

Sequence Viewer

Length: 132 bp
ATGAGTTACTATAGCCCTTTCAGTATATCACTTTGCCGCCTTTTGGTACAACTTGCAAACCCGAAGCAACTTAGCGATCACTATGGTTCCAAACATCCCAGAGAAAATCCTCCTCCCATTGAATCAGAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

44

Amino Acids

4.93

Weight (kDa)

6.71

Isoelectric Point (pI)

75.67

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0016349)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 37
AfaI GTAC 1 cut(s) 48
AfiI CCNNNNNNNGG 1 cut(s) 43
AgsI TTSAA 1 cut(s) 122
BfmI CTRYAG 1 cut(s) 10
BisI GCNGC 1 cut(s) 37
BlsI GCNGC 1 cut(s) 38
BmiI GGNNCC 1 cut(s) 88
Bsc4I CCNNNNNNNGG 1 cut(s) 43
BseGI GGATG 1 cut(s) 94
BseLI CCNNNNNNNGG 1 cut(s) 43
BseRI GAGGAG 1 cut(s) 102
BslI CCNNNNNNNGG 1 cut(s) 43
Bsp143I GATC 1 cut(s) 76
BspACI CCGC 1 cut(s) 37
BspLI GGNNCC 1 cut(s) 88
BssMI GATC 1 cut(s) 76
BstDEI CTNAG 1 cut(s) 71
BstF5I GGATG 1 cut(s) 94
BstKTI GATC 1 cut(s) 79
BstMBI GATC 1 cut(s) 76
BstSFI CTRYAG 1 cut(s) 10
BtsCI GGATG 1 cut(s) 94
Csp6I GTAC 1 cut(s) 47
CviJI RGCY 1 cut(s) 15
CviKI_1 RGCY 1 cut(s) 15
CviQI GTAC 1 cut(s) 47
DdeI CTNAG 1 cut(s) 71
DpnI GATC 1 cut(s) 78
DpnII GATC 1 cut(s) 76
FaiI YATR 3 cut(s) 12, 26, 84
Fnu4HI GCNGC 1 cut(s) 37
FokI GGATG 1 cut(s) 81
Fsp4HI GCNGC 1 cut(s) 37
GluI GCNGC 1 cut(s) 37
HinfI GANTC 1 cut(s) 122
Hpy188I TCNGA 1 cut(s) 127
HpyCH4V TGCA 1 cut(s) 56
HpyF3I CTNAG 1 cut(s) 71
Kzo9I GATC 1 cut(s) 76
LpnPI CCDG 1 cut(s) 112
MaeIII GTNAC 1 cut(s) 5
MalI GATC 1 cut(s) 78
MboI GATC 1 cut(s) 76
MnlI CCTC 2 cut(s) 120, 123
NdeII GATC 1 cut(s) 76
NlaIV GGNNCC 1 cut(s) 88
PfeI GAWTC 1 cut(s) 122
PkrI GCNGC 1 cut(s) 38
PspN4I GGNNCC 1 cut(s) 88
RsaI GTAC 1 cut(s) 48
RsaNI GTAC 1 cut(s) 47
SatI GCNGC 1 cut(s) 37
Sau3AI GATC 1 cut(s) 76
SfcI CTRYAG 1 cut(s) 10
SgeI CNNG 3 cut(s) 65, 73, 111
SsiI CCGC 1 cut(s) 37
TauI GCSGC 1 cut(s) 39
TfiI GAWTC 1 cut(s) 122
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.