Rorug07G0146500

Zinc-finger of C2H2 type

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000007
OG0016349
Physical Location & Seq
Reverse (-)
11547617 .. 11551256
3640 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug07G0146500.1

Sequence Viewer

Length: 1614 bp
ATGGGCCAAGATATAATCAAGCAGTTAAAGGGAATGAATGGGCAGGCAGTACCAGTTGGATATGGGAGTCCTAACAGTGATGCTGGGCACGTAGTCCTTGGATCATCAAAAAGGTGCAGTTTTCAAGCACAGGAAAAGCTATCCAGACCATTTGTCAGTTTGGGCCAAGATGTAACAAATAGGTTAAAGTTCAAGTTAAAGCGAATGGAAATGCGATCACTGGGATATGAGAGTCCCAAGGATGATGCTAGACAGGTAGTTCTTGAAGCATCAAAGAGGGGCAGTTTTCTTCAAGCACCGGAAAAGCATGCTAAAACATTGGACGGTACGGGCCAAGATGGACGTGCAGTACCAGTTGGATTGGACAGTCCCAAGGGTGACGCTACGCACCCAGTCCTTGAAGCATCAAAGAGTTGCAGTTTTCTCCAAGCTCCGGAAAAGCATGCCGAAATGTTTGATAATACGGGCCACAATGGGTCTCCAGTACCAGTTGGATTGGATAGTCGCAAGGGTGATGCTAGGCACCTAGTCCTTGAACCACCAAAGAGTTTTCGTCAAGCACAGAAAAAGCGATCTAAAACATTGGCCAATAGGGGCCAAGATGTAACTAACAAATCAAAAGCTTTGGATTGGAATGCAGTATCATTTGGATGTGACAGTCCCAAGGATGATGCTAGGCACGTAGTCCTTGAGGCATCAAAGAGCTTTCTTCAAGCACATGAAAAGCATTCTAAAAAATTGGACAATATGGGCCAAGATCTAACAAAGAAGTTAAAGGTCAAGTTAAAGTTAAAAAAGGAATTGCATGGGCGTCCAGTACCAGTTAGAGATGATGGTCTCAAGGGTGATGCTGGGAATCTAGTCCTAGAGGCATCAAAGAGTTTGGAACAAAGTATTGGTGGTTTGATTGATGGAGGTGGAAATACTGAAGTAGACCAGCACACTCAGATGGAGACTAAGTCGATCAAGCCAAGACTTGTACGGATATCTGTCACGGATGGTGATGCAACAGAGTCCTCCAGCGATGAAGAGGCTGAGCCCTTGGCCACTAGTCACCGAGTCAAGAAGTTCATCAATGAGATTATGATCGAGTCCTCCTCCACAAAAACTGATAGTGGTGTTTGGAGGAGCAGGACAACAAGGATGTGGCGGAAGAAGACAGGTGGAAAATCTGGACTTCCAGCTACTTGCCGAACGTTGAAGGCACAGACAACCTGGAAGAAGTTCCGCGGTGTGAAGGCACAGGCAACCAAGAACAAGTTCCTAGGAGTGAGGCAGAGACCATGGGGAAAATGGGCAGCAGAGATTAGAGAGCCTCATAGTGGAAGACGGCTCTGGTTGGGTACATTTGATACGGCTGAGGATGCAGCTATGGTGTACGACAAAGCAGCCGTTCTGCTGCGTGGACCTGACACTTTCACCAACTTCAGTACACCTCAGCCAAAACCATGGACACAGTTGGGAGTTTGGGACTGGAAAATCAACGGTGAAAGTAGGCAGACCAAAGACTGCATTGCACTTGATGGTCAAGTGGAGTCGTCCATAATGATGAAATCATTCTTTATACGTGCTGTCGACTACCAGGGTGCTGAGTTTTATGTCACGAATTCATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
4F5 zf-met

Protein Analysis

537

Amino Acids

59.3

Weight (kDa)

9.66

Isoelectric Point (pI)

38.88

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
AP2 PF00847 421 - 469 1.9e-11 AP2 domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0016349)

Species Orthologous Gene IDs
fragaria_vesca FvH4_5g24330 FvH4_5g24330 FvH4_5g24330
malus_domestica MD06G1021100.v1.1
prunus_persica Prupe.5G017600_v2.0.a1 Prupe.5G017600_v2.0.a1
rosa_chinensis RchiOBHm_Chr7g0214551
rosa_multiflora Rmu_sc0004199.1_g000047 Rmu_ssc0000287.1_g000007
rosa_roxburghii Rroxscaffold_3G00245240
rosa_rugosa Rorug07G0146500
rosa_samantha Rh7AG281700 Rh7BG273700 Rh7DG285800
rosa_wichuraiana Rw7G024100

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 522
AccI GTMKAC 2 cut(s) 933, 1575
AccII CGCG 1 cut(s) 1230
AccIII TCCGGA 1 cut(s) 433
AciI CCGC 3 cut(s) 1150, 1228, 1230
AclI AACGTT 1 cut(s) 1196
AclWI GGATC 1 cut(s) 109
AcoI YGGCCR 2 cut(s) 585, 1044
AcsI RAATTY 1 cut(s) 1606
AcuI CTGAAG 2 cut(s) 948, 1411
AcyI GRCGYC 1 cut(s) 811
AfaI GTAC 9 cut(s) 51, 328, 351, 486, 819, 981, 1345, 1379, 1432
AfiI CCNNNNNNNGG 2 cut(s) 433, 1322
AgsI TTSAA 8 cut(s) 125, 193, 266, 293, 401, 536, 713, 1201
AhdI GACNNNNNGTC 1 cut(s) 152
AhlI ACTAGT 1 cut(s) 1049
AjiI CACGTC 1 cut(s) 344
AjnI CCWGG 2 cut(s) 1214, 1581
AjuI GAANNNNNNNTTGG 4 cut(s) 879, 911, 1244, 1276
AluBI AGCT 6 cut(s) 139, 431, 623, 705, 1184, 1370
AluI AGCT 6 cut(s) 139, 431, 623, 705, 1184, 1370
Alw26I GTCTC 4 cut(s) 483, 842, 947, 1273
AlwI GGATC 1 cut(s) 109
Aor13HI TCCGGA 1 cut(s) 433
AoxI GGCC 8 cut(s) 4, 163, 331, 466, 585, 595, 751, 1044
ApeKI GCWGC 4 cut(s) 1298, 1367, 1388, 1399
ApoI RAATTY 1 cut(s) 1606
Asp700I GAANNNNTTC 3 cut(s) 1223, 1259, 1556
AspA2I CCTAGG 1 cut(s) 1264
AspS9I GGNCC 7 cut(s) 4, 163, 331, 466, 595, 751, 1406
AsuHPI GGTGA 7 cut(s) 389, 524, 857, 1013, 1046, 1411, 1499
AvaII GGWCC 1 cut(s) 1406
AvrII CCTAGG 1 cut(s) 1264
BaeGI GKGCMC 1 cut(s) 90
BalI TGGCCA 2 cut(s) 587, 1046
BanI GGYRCC 1 cut(s) 522
BanII GRGCYC 1 cut(s) 1041
BbsI GAAGAC 2 cut(s) 1163, 1333
BbvCI CCTCAGC 2 cut(s) 1359, 1437
BbvI GCAGC 4 cut(s) 1310, 1379, 1386, 1400
BccI CCATC 6 cut(s) 332, 827, 905, 943, 992, 1517
BceAI ACGGC 3 cut(s) 1346, 1371, 1376
BciT130I CCWGG 2 cut(s) 1216, 1583
BcoDI GTCTC 4 cut(s) 483, 842, 947, 1273
BcuI ACTAGT 1 cut(s) 1049
BfaI CTAG 8 cut(s) 249, 519, 527, 675, 860, 866, 1050, 1265
BglII AGATCT 1 cut(s) 757
BisI GCNGC 4 cut(s) 1299, 1368, 1389, 1400
BlnI CCTAGG 1 cut(s) 1264
BlpI GCTNAGC 1 cut(s) 1035
BlsI GCNGC 4 cut(s) 1300, 1369, 1390, 1401
Bme1390I CCNGG 2 cut(s) 1216, 1583
Bme18I GGWCC 1 cut(s) 1406
BmeRI GACNNNNNGTC 1 cut(s) 152
BmgBI CACGTC 1 cut(s) 344
BmgT120I GGNCC 7 cut(s) 4, 163, 331, 466, 595, 751, 1406
BmiI GGNNCC 2 cut(s) 524, 596
BmrFI CCNGG 2 cut(s) 1216, 1583
BmrI ACTGGG 2 cut(s) 230, 386
BmuI ACTGGG 2 cut(s) 230, 386
BpiI GAAGAC 2 cut(s) 1163, 1333
BplI GAGNNNNNCTC 2 cut(s) 1082, 1114
BpmI CTGGAG 2 cut(s) 465, 1003
Bpu10I CCTNAGC 2 cut(s) 1359, 1437
Bpu1102I GCTNAGC 1 cut(s) 1035
BpuEI CTTGAG 2 cut(s) 710, 824
BsaAI YACGTR 3 cut(s) 91, 682, 1568
BsaBI GATNNNNATC 1 cut(s) 1085
BsaHI GRCGYC 1 cut(s) 811
BsaI GGTCTC 3 cut(s) 483, 842, 1273
BsaWI WCCGGW 2 cut(s) 298, 433
BsaXI ACNNNNNCTCC 2 cut(s) 944, 974
Bsc4I CCNNNNNNNGG 2 cut(s) 433, 1322
Bse1I ACTGG 9 cut(s) 53, 225, 353, 392, 482, 488, 815, 821, 1478
Bse3DI GCAATG 1 cut(s) 1512
Bse8I GATNNNNATC 1 cut(s) 1085
BseAI TCCGGA 1 cut(s) 433
BseBI CCWGG 2 cut(s) 1216, 1583
BseGI GGATG 6 cut(s) 247, 656, 673, 1003, 1149, 1369
BseJI GATNNNNATC 1 cut(s) 1085
BseLI CCNNNNNNNGG 2 cut(s) 433, 1322
BseMI GCAATG 1 cut(s) 1512
BseMII CTCAG 5 cut(s) 959, 1026, 1350, 1451, 1581
BseNI ACTGG 9 cut(s) 53, 225, 353, 392, 482, 488, 815, 821, 1478
BseRI GAGGAG 2 cut(s) 1087, 1141
BseSI GKGCMC 1 cut(s) 90
BseXI GCAGC 4 cut(s) 1310, 1379, 1386, 1400
BseYI CCCAGC 2 cut(s) 83, 851
BsgI GTGCAG 2 cut(s) 136, 366
Bsh1236I CGCG 1 cut(s) 1230
BshFI GGCC 8 cut(s) 6, 165, 333, 468, 587, 597, 753, 1046
BshNI GGYRCC 1 cut(s) 522
BsiSI CCGG 2 cut(s) 299, 434
BslFI GGGAC 4 cut(s) 219, 354, 645, 1484
BslI CCNNNNNNNGG 2 cut(s) 433, 1322
BsmAI GTCTC 4 cut(s) 483, 842, 947, 1273
BsmFI GGGAC 4 cut(s) 219, 354, 645, 1484
BsmI GAATGC 2 cut(s) 640, 727
BsnI GGCC 8 cut(s) 6, 165, 333, 468, 587, 597, 753, 1046
Bso31I GGTCTC 3 cut(s) 483, 842, 1273
Bsp1286I GDGCHC 2 cut(s) 90, 1041
Bsp13I TCCGGA 1 cut(s) 433
Bsp143I GATC 6 cut(s) 101, 215, 572, 757, 963, 1086
Bsp1720I GCTNAGC 1 cut(s) 1035
Bsp19I CCATGG 2 cut(s) 1283, 1448
BspACI CCGC 3 cut(s) 1150, 1228, 1230
BspANI GGCC 8 cut(s) 6, 165, 333, 468, 587, 597, 753, 1046
BspCNI CTCAG 5 cut(s) 958, 1027, 1351, 1450, 1582
BspEI TCCGGA 1 cut(s) 433
BspFNI CGCG 1 cut(s) 1230
BspHI TCATGA 1 cut(s) 1610
BspLI GGNNCC 2 cut(s) 524, 596
BspPI GGATC 1 cut(s) 109
BspT107I GGYRCC 1 cut(s) 522
BspTNI GGTCTC 3 cut(s) 483, 842, 1273
BsrDI GCAATG 1 cut(s) 1512
BsrI ACTGG 9 cut(s) 53, 225, 353, 392, 482, 488, 815, 821, 1478
BssMI GATC 6 cut(s) 101, 215, 572, 757, 963, 1086
BssNI GRCGYC 1 cut(s) 811
BssT1I CCWWGG 8 cut(s) 97, 237, 372, 663, 1041, 1264, 1283, 1448
Bst2UI CCWGG 2 cut(s) 1216, 1583
Bst4CI ACNGT 6 cut(s) 77, 326, 368, 659, 1458, 1487
Bst6I CTCTTC 1 cut(s) 1023
BstACI GRCGYC 1 cut(s) 811
BstBAI YACGTR 3 cut(s) 91, 682, 1568
BstC8I GCNNGC 3 cut(s) 45, 309, 444
BstDEI CTNAG 6 cut(s) 945, 957, 1035, 1359, 1437, 1590
BstDSI CCRYGG 3 cut(s) 1228, 1283, 1448
BstF5I GGATG 6 cut(s) 247, 656, 673, 1003, 1149, 1369
BstFNI CGCG 1 cut(s) 1230
BstKTI GATC 6 cut(s) 104, 218, 575, 760, 966, 1089
BstMAI GTCTC 4 cut(s) 483, 842, 947, 1273
BstMBI GATC 6 cut(s) 101, 215, 572, 757, 963, 1086
BstMWI GCNNNNNNNGC 1 cut(s) 1364
BstNI CCWGG 2 cut(s) 1216, 1583
BstNSI RCATGY 2 cut(s) 311, 446
BstSCI CCNGG 2 cut(s) 1214, 1581
BstSLI GKGCMC 1 cut(s) 90
BstUI CGCG 1 cut(s) 1230
BstV1I GCAGC 4 cut(s) 1310, 1379, 1386, 1400
BstV2I GAAGAC 2 cut(s) 1163, 1333
BstX2I RGATCY 1 cut(s) 757
BstXI CCANNNNNNTGG 1 cut(s) 1449
BstYI RGATCY 1 cut(s) 757
BsuRI GGCC 8 cut(s) 6, 165, 333, 468, 587, 597, 753, 1046
BtgI CCRYGG 3 cut(s) 1228, 1283, 1448
BtgZI GCGATG 1 cut(s) 1038
BtrI CACGTC 1 cut(s) 344
BtsCI GGATG 6 cut(s) 247, 656, 673, 1003, 1149, 1369
BtsIMutI CAGTG 2 cut(s) 82, 218
Cac8I GCNNGC 3 cut(s) 45, 309, 444
CciI TCATGA 1 cut(s) 1610
Cfr13I GGNCC 7 cut(s) 4, 163, 331, 466, 595, 751, 1406
Cfr42I CCGCGG 1 cut(s) 1231
CseI GACGC 2 cut(s) 389, 800
Csp6I GTAC 9 cut(s) 50, 327, 350, 485, 818, 980, 1344, 1378, 1431
CviAII CATG 7 cut(s) 308, 443, 719, 806, 1284, 1449, 1611
CviQI GTAC 9 cut(s) 50, 327, 350, 485, 818, 980, 1344, 1378, 1431
DdeI CTNAG 6 cut(s) 945, 957, 1035, 1359, 1437, 1590
DpnI GATC 6 cut(s) 103, 217, 574, 759, 965, 1088
DpnII GATC 6 cut(s) 101, 215, 572, 757, 963, 1086
DriI GACNNNNNGTC 1 cut(s) 152
EaeI YGGCCR 2 cut(s) 585, 1044
Eam1104I CTCTTC 1 cut(s) 1023
Eam1105I GACNNNNNGTC 1 cut(s) 152
EarI CTCTTC 1 cut(s) 1023
EciI GGCGGA 1 cut(s) 1165
Eco130I CCWWGG 8 cut(s) 97, 237, 372, 663, 1041, 1264, 1283, 1448
Eco24I GRGCYC 1 cut(s) 1041
Eco31I GGTCTC 3 cut(s) 483, 842, 1273
Eco32I GATATC 1 cut(s) 987
Eco47I GGWCC 1 cut(s) 1406
Eco57I CTGAAG 2 cut(s) 948, 1411
EcoRI GAATTC 1 cut(s) 1606
EcoRII CCWGG 2 cut(s) 1214, 1581
EcoRV GATATC 1 cut(s) 987
EcoT14I CCWWGG 8 cut(s) 97, 237, 372, 663, 1041, 1264, 1283, 1448
EcoT38I GRGCYC 1 cut(s) 1041
ErhI CCWWGG 8 cut(s) 97, 237, 372, 663, 1041, 1264, 1283, 1448
FaeI CATG 7 cut(s) 311, 446, 722, 809, 1287, 1452, 1614
FaqI GGGAC 4 cut(s) 219, 354, 645, 1484
FatI CATG 7 cut(s) 307, 442, 718, 805, 1283, 1448, 1610
FblI GTMKAC 2 cut(s) 933, 1575
Fnu4HI GCNGC 4 cut(s) 1299, 1368, 1389, 1400
FokI GGATG 6 cut(s) 254, 663, 680, 1010, 1156, 1376
FriOI GRGCYC 1 cut(s) 1041
Fsp4HI GCNGC 4 cut(s) 1299, 1368, 1389, 1400
FspBI CTAG 8 cut(s) 249, 519, 527, 675, 860, 866, 1050, 1265
GluI GCNGC 4 cut(s) 1299, 1368, 1389, 1400
GsaI CCCAGC 2 cut(s) 87, 855
GsuI CTGGAG 2 cut(s) 465, 1003
HaeIII GGCC 8 cut(s) 6, 165, 333, 468, 587, 597, 753, 1046
HapII CCGG 2 cut(s) 299, 434
HgaI GACGC 2 cut(s) 389, 800
Hin1I GRCGYC 1 cut(s) 811
Hin1II CATG 7 cut(s) 311, 446, 722, 809, 1287, 1452, 1614
HincII GTYRAC 1 cut(s) 1576
HindII GTYRAC 1 cut(s) 1576
HindIII AAGCTT 1 cut(s) 621
HinfI GANTC 7 cut(s) 67, 232, 856, 1013, 1059, 1091, 1535
HpaII CCGG 2 cut(s) 299, 434
HphI GGTGA 7 cut(s) 389, 524, 857, 1013, 1046, 1411, 1499
Hpy166II GTNNAC 5 cut(s) 934, 1378, 1406, 1433, 1576
Hpy188I TCNGA 1 cut(s) 948
Hpy188III TCNNGA 7 cut(s) 144, 263, 434, 1063, 1173, 1603, 1611
Hpy8I GTNNAC 5 cut(s) 934, 1378, 1406, 1433, 1576
HpyAV CCTTC 2 cut(s) 1195, 1231
HpyCH4III ACNGT 6 cut(s) 77, 326, 368, 659, 1458, 1487
HpyCH4IV ACGT 5 cut(s) 90, 343, 681, 1196, 1567
HpyCH4V TGCA 9 cut(s) 117, 347, 417, 638, 805, 1007, 1367, 1512, 1517
HpyF10VI GCNNNNNNNGC 1 cut(s) 1364
HpyF3I CTNAG 6 cut(s) 945, 957, 1035, 1359, 1437, 1590
HpySE526I ACGT 5 cut(s) 90, 343, 681, 1196, 1567
Hsp92I GRCGYC 1 cut(s) 811
Hsp92II CATG 7 cut(s) 311, 446, 722, 809, 1287, 1452, 1614
Kpn2I TCCGGA 1 cut(s) 433
KspI CCGCGG 1 cut(s) 1231
Kzo9I GATC 6 cut(s) 101, 215, 572, 757, 963, 1086
LmnI GCTCC 2 cut(s) 436, 1128
Lsp1109I GCAGC 4 cut(s) 1310, 1379, 1386, 1400
MaeI CTAG 8 cut(s) 249, 519, 527, 675, 860, 866, 1050, 1265
MaeII ACGT 5 cut(s) 90, 343, 681, 1196, 1567
MaeIII GTNAC 7 cut(s) 172, 377, 604, 653, 991, 1052, 1600
MalI GATC 6 cut(s) 103, 217, 574, 759, 965, 1088
MboI GATC 6 cut(s) 101, 215, 572, 757, 963, 1086
MboII GAAGA 7 cut(s) 281, 701, 1040, 1165, 1168, 1231, 1338
MflI RGATCY 1 cut(s) 757
MhlI GDGCHC 2 cut(s) 90, 1041
MlsI TGGCCA 2 cut(s) 587, 1046
MluCI AATT 3 cut(s) 737, 800, 1606
MluNI TGGCCA 2 cut(s) 587, 1046
MlyI GAGTC 6 cut(s) 76, 241, 1022, 1068, 1100, 1544
MmeI TCCRAC 3 cut(s) 37, 337, 472
Mox20I TGGCCA 2 cut(s) 587, 1046
MroI TCCGGA 1 cut(s) 433
MroXI GAANNNNTTC 3 cut(s) 1223, 1259, 1556
MscI TGGCCA 2 cut(s) 587, 1046
MseI TTAA 6 cut(s) 26, 185, 197, 773, 785, 791
MslI CAYNNNNRTG 3 cut(s) 649, 947, 1547
Msp20I TGGCCA 2 cut(s) 587, 1046
MspA1I CMGCKG 1 cut(s) 1230
MspI CCGG 2 cut(s) 299, 434
MspR9I CCNGG 2 cut(s) 1216, 1583
Mva1269I GAATGC 2 cut(s) 640, 727
MvaI CCWGG 2 cut(s) 1216, 1583
MvnI CGCG 1 cut(s) 1230
MwoI GCNNNNNNNGC 1 cut(s) 1364
NcoI CCATGG 2 cut(s) 1283, 1448
NdeII GATC 6 cut(s) 101, 215, 572, 757, 963, 1086
NlaIII CATG 7 cut(s) 311, 446, 722, 809, 1287, 1452, 1614
NlaIV GGNNCC 2 cut(s) 524, 596
NmuCI GTSAC 5 cut(s) 377, 653, 991, 1052, 1600
NspI RCATGY 2 cut(s) 311, 446
PaeI GCATGC 2 cut(s) 311, 446
PagI TCATGA 1 cut(s) 1610
PctI GAATGC 2 cut(s) 640, 727
PdmI GAANNNNTTC 3 cut(s) 1223, 1259, 1556
PfeI GAWTC 1 cut(s) 856
PflFI GACNNNGTC 1 cut(s) 958
PkrI GCNGC 4 cut(s) 1300, 1369, 1390, 1401
PleI GAGTC 6 cut(s) 75, 240, 1021, 1067, 1099, 1543
PpsI GAGTC 6 cut(s) 75, 240, 1021, 1067, 1099, 1543
Ppu21I YACGTR 3 cut(s) 91, 682, 1568
Psp1406I AACGTT 1 cut(s) 1196
Psp6I CCWGG 2 cut(s) 1214, 1581
PspFI CCCAGC 2 cut(s) 83, 851
PspGI CCWGG 2 cut(s) 1214, 1581
PspN4I GGNNCC 2 cut(s) 524, 596
PspPI GGNCC 7 cut(s) 4, 163, 331, 466, 595, 751, 1406
PsuI RGATCY 1 cut(s) 757
PsyI GACNNNGTC 1 cut(s) 958
RsaI GTAC 9 cut(s) 51, 328, 351, 486, 819, 981, 1345, 1379, 1432
RsaNI GTAC 9 cut(s) 50, 327, 350, 485, 818, 980, 1344, 1378, 1431
RseI CAYNNNNRTG 3 cut(s) 649, 947, 1547
SacII CCGCGG 1 cut(s) 1231
SalI GTCGAC 1 cut(s) 1574
SaqAI TTAA 6 cut(s) 26, 185, 197, 773, 785, 791
SatI GCNGC 4 cut(s) 1299, 1368, 1389, 1400
Sau3AI GATC 6 cut(s) 101, 215, 572, 757, 963, 1086
Sau96I GGNCC 7 cut(s) 4, 163, 331, 466, 595, 751, 1406
SchI GAGTC 6 cut(s) 76, 241, 1022, 1068, 1100, 1544
ScrFI CCNGG 2 cut(s) 1216, 1583
SduI GDGCHC 2 cut(s) 90, 1041
Sfr303I CCGCGG 1 cut(s) 1231
SgrBI CCGCGG 1 cut(s) 1231
SinI GGWCC 1 cut(s) 1406
SmiMI CAYNNNNRTG 3 cut(s) 649, 947, 1547
SmlI CTYRAG 2 cut(s) 689, 839
SmoI CTYRAG 2 cut(s) 689, 839
SpeI ACTAGT 1 cut(s) 1049
SphI GCATGC 2 cut(s) 311, 446
Sse9I AATT 3 cut(s) 737, 800, 1606
SsiI CCGC 3 cut(s) 1150, 1228, 1230
SspMI CTAG 8 cut(s) 249, 519, 527, 675, 860, 866, 1050, 1265
StyD4I CCNGG 2 cut(s) 1214, 1581
StyI CCWWGG 8 cut(s) 97, 237, 372, 663, 1041, 1264, 1283, 1448
TaaI ACNGT 6 cut(s) 77, 326, 368, 659, 1458, 1487
TaiI ACGT 5 cut(s) 93, 346, 684, 1199, 1570
TaqI TCGA 3 cut(s) 962, 1089, 1575
TasI AATT 3 cut(s) 737, 800, 1606
TatI WGTACW 1 cut(s) 1430
TfiI GAWTC 1 cut(s) 856
Tru1I TTAA 6 cut(s) 26, 185, 197, 773, 785, 791
Tru9I TTAA 6 cut(s) 26, 185, 197, 773, 785, 791
TscAI CASTG 2 cut(s) 82, 225
TseFI GTSAC 5 cut(s) 377, 653, 991, 1052, 1600
TseI GCWGC 4 cut(s) 1298, 1367, 1388, 1399
Tsp45I GTSAC 5 cut(s) 377, 653, 991, 1052, 1600
TspDTI ATGAA 6 cut(s) 50, 735, 1041, 1060, 1565, 1599
TspGWI ACGGA 2 cut(s) 997, 1010
TspRI CASTG 2 cut(s) 82, 225
Tth111I GACNNNGTC 1 cut(s) 958
VpaK11BI GGWCC 1 cut(s) 1406
XapI RAATTY 1 cut(s) 1606
XceI RCATGY 2 cut(s) 311, 446
XcmI CCANNNNNNNNNTGG 1 cut(s) 1290
XmaJI CCTAGG 1 cut(s) 1264
XmiI GTMKAC 2 cut(s) 933, 1575
XmnI GAANNNNTTC 3 cut(s) 1223, 1259, 1556
XspI CTAG 8 cut(s) 249, 519, 527, 675, 860, 866, 1050, 1265
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.