MD06G1125600.v1.1

Nuclear pore complex protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr06
OG0028304
Physical Location & Seq
Forward (+)
26742960 .. 26747840
4881 bp
Loading structure...
UTR
Exon/CDS
Intron
MD06G1125600.v1.1.491

Sequence Viewer

Length: 1980 bp
ATGGGTGGTGATTCCTTTCGGTTTCCTGGCTGGGGTTCAACTCACTCTTGTGGGAATTCGTCTGGAAGTCCATTTTATTCCCAATCGTTCTTGGAGCATGAATGGCGCAACAACAACGTTTCTGCTCCCAATCTCTGCAGGTGCGGTCAAAATGGTTTGTTTGGAGCAGCGCAATCTTCTTGGCCGTTTCCTCCTTTTGGAGTACCTTATACTCCTGATCTCAGTCTCTCATTGTCACCAATTGCTGGTTTCTGGATGTTTGTTCCCTTTAGTTCGACATGCATCCCAGCCTTTGCCTCTGCTAGCACACCAGCTTTTGGTGCAACAGGCTTTGCGCCCTTTGCTAGAACAACAAGTCCTATGTTCGGAAGCAGAGGAGATGGGTCTTATGGTGGATCATTTGGAGCTTCAAACACCCCGGCTTTTGGTTCATCTAGCTCCACCGTCGGTACTTCAAGCAACCAAGCTTTTGGTGCTTCAAGTACTACTGGTTTTGGTTCATTTAGTAGTACACAACCTTTGAGCTCTTCACCAACTTCTGCATTTGCCCAATCAAGTTCCAGATTCAGTAGCAGCCCATTTGGTGCTTCGTCTCCTTTTGGATCACAGTGTTTTCCATTTGTAGGTCAATCAACAACAATTGGGAACACCAGGCAGTCAGCTTTTGGTGGCCAACAACACAATGGTAGTAGCGTGGCTTCATACACTGCAACTCTTGCAGTTGATGATAGTAGGAAAGTGGAGTCAATATCTGCAATGCCAGTATATAAAGACAAAAGTCATGAAGAACTCCGTGTGGAAGATTATAAATTGGGGAAAGGTGTTCAATTTCCTGCCGGTGGGAGTACCATTGACATTTCTACCTCACAGCCGAATCGTTTGCATCCTGCACCATCACTTCTTCAACCATCTTCAAGTCCCTTTAGTACCTCTACTTCGTCTAATATATCTGCTCCAGAAACCCTATCATTCACTTCTCAAGGCATTGTTTTTACACCACCATCTCCTTCAGTTTTTCGACAAACATCATCTCTGTCTCCATTAAGTTCATCAACCTCATCTGGATTTTCATGTCTTGCTCCTGCTCAAACATCAAATTCTGCGCCTCCAGCTATGCAGATATGTATTGGACGAAGTGCCACTCCCTTTGGGCAGAAGAATACTCCATTTAGGAGCTCCTCTGAGGCTAGTTCTACAAGCAACCCAATTTCTTTTGGTCAAGCTACTCCTTTGTTCGTGTCATCTCAGCCTCTTCAGAGTAGTGGTTCTGTCTTCAACATTGTTAGTCAAAATCAGCAAGGCAACCCAGGTGGTTCGACAGGAATTCTTGGTCAGAATGGGTTTGAAAGCTTTTCATCAACCCCTGCGTTTGGTCAATTAAGTTATATGTCCAGTTGCTGCCAGTTATGCGCTTCATGTGCTCAATCAACAACTGGAAACATTGCTCTGGGGAAGCCAGTTTCTGAGGGTCGGCATCAGGGAAGTGGTGTACCTACAACTGTAACAAACACTGCTTATGGTGAACCGGATGAAAAAATCCACTCAATATCGTCAATGCCAATTTATGGAGACAGATCTCACGAGGAAATGAGATGGCAGAATTATCAATTGGGGGATAAAGGTGGACCGGCTCTTGGTGGTGTGACTCACTTTCACTTGCTTACCAAGAAACCTGCACCGACATTTGCTCAAACATCATTGAGTCTGTCCAATACCTCTACTGTATCTAATATATCTGCTCCGCAAAATCCATCCATTACTGCTGCGGGCTTTGGAGCCTCATCCACACCCAATCTTTTTGCATCTTCATCATCAACTGCTTCATTATTTGGACCAATTCCATCTCCGTCCTTTTCTAGTTCATCAGCTGCACCAGCATCTACATTTGCATTTCCTTCTCCAGCTCCAGCAACAACTTCGACATGCAATCATGGCCTATTCGGTTGCATGCCGTCTGTTGCACAAACAGGAAAAGAGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000972 GO:0000973 GO:0003674 GO:0003676 GO:0003682 GO:0003712 GO:0003713 GO:0003723 GO:0003729 GO:0005048 GO:0005198 GO:0005215 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005635 GO:0005643 GO:0005654 GO:0005737 GO:0005829 GO:0006139 GO:0006259 GO:0006260 GO:0006403 GO:0006405 GO:0006406 GO:0006606 GO:0006611 GO:0006725 GO:0006807 GO:0006810 GO:0006886 GO:0006913 GO:0006996 GO:0006997 GO:0006999 GO:0008104 GO:0008139 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009889 GO:0009891 GO:0009893 GO:0009987 GO:0010467 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0012505 GO:0015031 GO:0015833 GO:0015931 GO:0016020 GO:0016032 GO:0016043 GO:0016234 GO:0016604 GO:0017038 GO:0017056 GO:0019219 GO:0019222 GO:0022607 GO:0031080 GO:0031090 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0031503 GO:0031965 GO:0031967 GO:0031974 GO:0031975 GO:0031981 GO:0032991 GO:0033036 GO:0033120 GO:0033218 GO:0033365 GO:0034397 GO:0034398 GO:0034399 GO:0034504 GO:0034613 GO:0034622 GO:0034641 GO:0034645 GO:0042277 GO:0042405 GO:0042886 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043484 GO:0043933 GO:0044085 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044403 GO:0044419 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044451 GO:0044464 GO:0044614 GO:0044615 GO:0045184 GO:0045935 GO:0046483 GO:0046907 GO:0046931 GO:0048024 GO:0048026 GO:0048518 GO:0048522 GO:0048583 GO:0050000 GO:0050657 GO:0050658 GO:0050684 GO:0050685 GO:0050789 GO:0050794 GO:0051028 GO:0051168 GO:0051169 GO:0051170 GO:0051171 GO:0051173 GO:0051179 GO:0051234 GO:0051236 GO:0051252 GO:0051254 GO:0051276 GO:0051292 GO:0051640 GO:0051641 GO:0051649 GO:0051704 GO:0060255 GO:0065003 GO:0065007 GO:0070013 GO:0070727 GO:0071166 GO:0071426 GO:0071427 GO:0071702 GO:0071704 GO:0071705 GO:0071840 GO:0072594 GO:0080090 GO:0090304 GO:0097159 GO:0140110 GO:1901360 GO:1901363 GO:1901576 GO:1902446 GO:1902680 GO:1903311 GO:1903313 GO:1903506 GO:1903508 GO:1990841 GO:1990904 GO:2000030 GO:2001141
KEGG Pathways
Metabolic & Signaling
ko03013 ko05164 map03013 map05164
Pfam Domains
Protein Families
Nucleoporin2

Protein Analysis

660

Amino Acids

67.67

Weight (kDa)

7.94

Isoelectric Point (pI)

65.72

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Nup98_GLEBS PF21240 249 - 269 7.8e-06 Nup98, Gle2-binding sequence
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0028304)

Species Orthologous Gene IDs
malus_domestica MD06G1125600.v1.1
pyrus_communis pycom06g11590

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 807
AarI CACCTGC 1 cut(s) 129
Acc36I ACCTGC 2 cut(s) 129, 1681
AccB7I CCANNNNNTGG 3 cut(s) 245, 317, 1565
AciI CCGC 3 cut(s) 144, 1742, 1766
AclI AACGTT 1 cut(s) 117
AclWI GGATC 2 cut(s) 403, 610
AcoI YGGCCR 2 cut(s) 182, 670
AcsI RAATTY 3 cut(s) 55, 1096, 1323
AcuI CTGAAG 2 cut(s) 993, 1238
AfaI GTAC 7 cut(s) 204, 451, 484, 511, 847, 928, 1491
AgsI TTSAA 9 cut(s) 39, 411, 456, 480, 827, 905, 915, 1276, 1346
AjnI CCWGG 3 cut(s) 25, 650, 1306
AjuI GAANNNNNNNTTGG 2 cut(s) 1592, 1624
AleI CACNNNNGTG 1 cut(s) 48
AloI GAACNNNNNNTCC 2 cut(s) 340, 372
Alw21I GWGCWC 3 cut(s) 527, 1178, 1423
Alw26I GTCTC 4 cut(s) 230, 597, 1041, 1563
AlwI GGATC 2 cut(s) 403, 610
AlwNI CAGNNNCTG 2 cut(s) 1398, 1463
AoxI GGCC 3 cut(s) 182, 670, 1933
ApeKI GCWGC 5 cut(s) 167, 573, 1398, 1763, 1868
ApoI RAATTY 3 cut(s) 55, 1096, 1323
AspLEI GCGC 5 cut(s) 108, 172, 337, 1105, 1412
AspS9I GGNCC 2 cut(s) 1625, 1832
AsuC2I CCSGG 1 cut(s) 419
AsuHPI GGTGA 4 cut(s) 20, 228, 522, 1532
AsuNHI GCTAGC 1 cut(s) 302
AvaII GGWCC 2 cut(s) 1625, 1832
BalI TGGCCA 1 cut(s) 672
BanII GRGCYC 2 cut(s) 527, 1178
BarI GAAGNNNNNNTAC 4 cut(s) 682, 714, 919, 951
BauI CACGAG 1 cut(s) 1580
BbsI GAAGAC 1 cut(s) 1264
Bbv12I GWGCWC 3 cut(s) 527, 1178, 1423
BbvI GCAGC 5 cut(s) 179, 585, 1385, 1750, 1855
BccI CCATC 7 cut(s) 374, 901, 916, 1009, 1587, 1759, 1849
BceAI ACGGC 2 cut(s) 169, 1936
BcgI CGANNNNNNTGC 4 cut(s) 862, 896, 1899, 1933
BciT130I CCWGG 3 cut(s) 27, 652, 1308
BcnI CCSGG 1 cut(s) 419
BcoDI GTCTC 4 cut(s) 230, 597, 1041, 1563
BfaI CTAG 5 cut(s) 303, 345, 435, 1188, 1857
BfmI CTRYAG 1 cut(s) 136
BfuAI ACCTGC 2 cut(s) 129, 1681
BglII AGATCT 1 cut(s) 1574
BisI GCNGC 5 cut(s) 168, 574, 1399, 1764, 1869
BlsI GCNGC 5 cut(s) 169, 575, 1400, 1765, 1870
BmcAI AGTACT 1 cut(s) 484
Bme1390I CCNGG 4 cut(s) 27, 419, 652, 1308
Bme18I GGWCC 2 cut(s) 1625, 1832
BmgT120I GGNCC 2 cut(s) 1625, 1832
BmiI GGNNCC 1 cut(s) 1777
BmrFI CCNGG 4 cut(s) 27, 419, 652, 1308
BmsI GCATC 5 cut(s) 291, 892, 1483, 1811, 1886
BmtI GCTAGC 1 cut(s) 306
BoxI GACNNNNGTC 1 cut(s) 777
BpiI GAAGAC 1 cut(s) 1264
BpmI CTGGAG 4 cut(s) 939, 1092, 1884, 1890
BpuEI CTTGAG 1 cut(s) 963
BpuMI CCSGG 1 cut(s) 419
BsaJI CCNNGG 2 cut(s) 417, 1306
BsaWI WCCGGW 1 cut(s) 1525
Bse118I RCCGGY 2 cut(s) 836, 1627
Bse1I ACTGG 6 cut(s) 493, 761, 1392, 1402, 1438, 1457
Bse3DI GCAATG 2 cut(s) 762, 1440
BseBI CCWGG 3 cut(s) 27, 652, 1308
BseDI CCNNGG 2 cut(s) 417, 1306
BseGI GGATG 6 cut(s) 261, 282, 883, 1534, 1751, 1781
BseMI GCAATG 2 cut(s) 762, 1440
BseMII CTCAG 4 cut(s) 235, 1173, 1259, 1455
BseNI ACTGG 6 cut(s) 493, 761, 1392, 1402, 1438, 1457
BseRI GAGGAG 2 cut(s) 390, 1168
BseXI GCAGC 5 cut(s) 179, 585, 1385, 1750, 1855
BseYI CCCAGC 2 cut(s) 30, 286
BsgI GTGCAG 3 cut(s) 873, 1659, 1854
BshFI GGCC 3 cut(s) 184, 672, 1935
BsiHKAI GWGCWC 3 cut(s) 527, 1178, 1423
BsiSI CCGG 4 cut(s) 419, 837, 1526, 1628
BslFI GGGAC 1 cut(s) 903
BsmAI GTCTC 4 cut(s) 230, 597, 1041, 1563
BsmBI CGTCTC 1 cut(s) 597
BsmFI GGGAC 1 cut(s) 903
BsnI GGCC 3 cut(s) 184, 672, 1935
Bsp1286I GDGCHC 3 cut(s) 527, 1178, 1423
Bsp143I GATC 4 cut(s) 217, 395, 602, 1574
BspACI CCGC 3 cut(s) 144, 1742, 1766
BspANI GGCC 3 cut(s) 184, 672, 1935
BspCNI CTCAG 4 cut(s) 234, 1174, 1258, 1456
BspHI TCATGA 1 cut(s) 781
BspLI GGNNCC 1 cut(s) 1777
BspMAI CTGCAG 1 cut(s) 140
BspMI ACCTGC 2 cut(s) 129, 1681
BspOI GCTAGC 1 cut(s) 306
BspPI GGATC 2 cut(s) 403, 610
BspQI GCTCTTC 1 cut(s) 532
BsrDI GCAATG 2 cut(s) 762, 1440
BsrFI RCCGGY 2 cut(s) 836, 1627
BsrI ACTGG 6 cut(s) 493, 761, 1392, 1402, 1438, 1457
BssAI RCCGGY 2 cut(s) 836, 1627
BssECI CCNNGG 2 cut(s) 417, 1306
BssMI GATC 4 cut(s) 217, 395, 602, 1574
BssSI CACGAG 1 cut(s) 1580
Bst2BI CACGAG 1 cut(s) 1580
Bst2UI CCWGG 3 cut(s) 27, 652, 1308
Bst4CI ACNGT 4 cut(s) 445, 609, 1501, 1723
Bst6I CTCTTC 2 cut(s) 532, 1257
BstAPI GCANNNNNTGC 1 cut(s) 716
BstC8I GCNNGC 3 cut(s) 304, 1768, 1949
BstDEI CTNAG 4 cut(s) 221, 1182, 1245, 1464
BstF5I GGATG 6 cut(s) 261, 282, 883, 1534, 1751, 1781
BstHHI GCGC 5 cut(s) 108, 172, 337, 1105, 1412
BstKTI GATC 4 cut(s) 220, 398, 605, 1577
BstMAI GTCTC 4 cut(s) 230, 597, 1041, 1563
BstMBI GATC 4 cut(s) 217, 395, 602, 1574
BstNI CCWGG 3 cut(s) 27, 652, 1308
BstNSI RCATGY 3 cut(s) 282, 1926, 1951
BstPAI GACNNNNGTC 1 cut(s) 777
BstSCI CCNGG 4 cut(s) 25, 417, 650, 1306
BstSFI CTRYAG 1 cut(s) 136
BstV1I GCAGC 5 cut(s) 179, 585, 1385, 1750, 1855
BstV2I GAAGAC 1 cut(s) 1264
BstX2I RGATCY 1 cut(s) 1574
BstXI CCANNNNNNTGG 1 cut(s) 470
BstYI RGATCY 1 cut(s) 1574
BsuRI GGCC 3 cut(s) 184, 672, 1935
BtsCI GGATG 6 cut(s) 261, 282, 883, 1534, 1751, 1781
BtsI GCAGTG 2 cut(s) 705, 1509
BtsIMutI CAGTG 3 cut(s) 614, 705, 1509
BveI ACCTGC 2 cut(s) 129, 1681
Cac8I GCNNGC 3 cut(s) 304, 1768, 1949
CaiI CAGNNNCTG 2 cut(s) 1398, 1463
CciI TCATGA 1 cut(s) 781
CfoI GCGC 5 cut(s) 108, 172, 337, 1105, 1412
Cfr10I RCCGGY 2 cut(s) 836, 1627
Cfr13I GGNCC 2 cut(s) 1625, 1832
Csp6I GTAC 7 cut(s) 203, 450, 483, 510, 846, 927, 1490
CspCI CAANNNNNGTGG 4 cut(s) 1129, 1164, 1291, 1326
CviAII CATG 8 cut(s) 98, 279, 782, 1071, 1416, 1923, 1931, 1948
CviQI GTAC 7 cut(s) 203, 450, 483, 510, 846, 927, 1490
DdeI CTNAG 4 cut(s) 221, 1182, 1245, 1464
DpnI GATC 4 cut(s) 219, 397, 604, 1576
DpnII GATC 4 cut(s) 217, 395, 602, 1574
EaeI YGGCCR 2 cut(s) 182, 670
Eam1104I CTCTTC 2 cut(s) 532, 1257
EarI CTCTTC 2 cut(s) 532, 1257
Ecl136II GAGCTC 2 cut(s) 525, 1176
Eco24I GRGCYC 2 cut(s) 527, 1178
Eco47I GGWCC 2 cut(s) 1625, 1832
Eco53kI GAGCTC 2 cut(s) 525, 1176
Eco57I CTGAAG 2 cut(s) 993, 1238
EcoICRI GAGCTC 2 cut(s) 525, 1176
EcoRI GAATTC 2 cut(s) 55, 1323
EcoRII CCWGG 3 cut(s) 25, 650, 1306
EcoT22I ATGCAT 1 cut(s) 284
EcoT38I GRGCYC 2 cut(s) 527, 1178
Esp3I CGTCTC 1 cut(s) 597
FaeI CATG 8 cut(s) 101, 282, 785, 1074, 1419, 1926, 1934, 1951
FaqI GGGAC 1 cut(s) 903
FatI CATG 8 cut(s) 97, 278, 781, 1070, 1415, 1922, 1930, 1947
FauI CCCGC 1 cut(s) 1759
Fnu4HI GCNGC 5 cut(s) 168, 574, 1399, 1764, 1869
FokI GGATG 6 cut(s) 268, 269, 870, 1541, 1738, 1768
FriOI GRGCYC 2 cut(s) 527, 1178
Fsp4HI GCNGC 5 cut(s) 168, 574, 1399, 1764, 1869
FspBI CTAG 5 cut(s) 303, 345, 435, 1188, 1857
GlaI GCGC 5 cut(s) 107, 171, 336, 1104, 1411
GluI GCNGC 5 cut(s) 168, 574, 1399, 1764, 1869
GsaI CCCAGC 2 cut(s) 34, 290
GsuI CTGGAG 4 cut(s) 939, 1092, 1884, 1890
HaeIII GGCC 3 cut(s) 184, 672, 1935
HapII CCGG 4 cut(s) 419, 837, 1526, 1628
HhaI GCGC 5 cut(s) 108, 172, 337, 1105, 1412
Hin1II CATG 8 cut(s) 101, 282, 785, 1074, 1419, 1926, 1934, 1951
Hin6I GCGC 5 cut(s) 106, 170, 335, 1103, 1410
HinP1I GCGC 5 cut(s) 106, 170, 335, 1103, 1410
HindIII AAGCTT 2 cut(s) 465, 1348
HinfI GANTC 6 cut(s) 11, 564, 743, 874, 1645, 1702
HpaII CCGG 4 cut(s) 419, 837, 1526, 1628
HphI GGTGA 4 cut(s) 20, 228, 522, 1532
Hpy166II GTNNAC 4 cut(s) 512, 1490, 1523, 1625
Hpy188I TCNGA 5 cut(s) 368, 1183, 1257, 1335, 1465
Hpy188III TCNNGA 8 cut(s) 63, 215, 253, 561, 782, 956, 1062, 1580
Hpy8I GTNNAC 4 cut(s) 512, 1490, 1523, 1625
Hpy99I CGWCG 1 cut(s) 449
HpyAV CCTTC 2 cut(s) 1017, 1905
HpyCH4III ACNGT 4 cut(s) 445, 609, 1501, 1723
HpyCH4IV ACGT 1 cut(s) 117
HpyF3I CTNAG 4 cut(s) 221, 1182, 1245, 1464
HpySE526I ACGT 1 cut(s) 117
Hsp92II CATG 8 cut(s) 101, 282, 785, 1074, 1419, 1926, 1934, 1951
HspAI GCGC 5 cut(s) 106, 170, 335, 1103, 1410
Kzo9I GATC 4 cut(s) 217, 395, 602, 1574
LguI GCTCTTC 1 cut(s) 532
Lsp1109I GCAGC 5 cut(s) 179, 585, 1385, 1750, 1855
LweI GCATC 5 cut(s) 291, 892, 1483, 1811, 1886
MaeI CTAG 5 cut(s) 303, 345, 435, 1188, 1857
MaeII ACGT 1 cut(s) 117
MaeIII GTNAC 3 cut(s) 234, 1501, 1642
MalI GATC 4 cut(s) 219, 397, 604, 1576
MboI GATC 4 cut(s) 217, 395, 602, 1574
MfeI CAATTG 3 cut(s) 240, 639, 1607
MflI RGATCY 1 cut(s) 1574
MhlI GDGCHC 3 cut(s) 527, 1178, 1423
MlsI TGGCCA 1 cut(s) 672
MluNI TGGCCA 1 cut(s) 672
MlyI GAGTC 3 cut(s) 752, 1639, 1711
Mox20I TGGCCA 1 cut(s) 672
Mph1103I ATGCAT 1 cut(s) 284
MscI TGGCCA 1 cut(s) 672
MseI TTAA 2 cut(s) 1043, 1379
MslI CAYNNNNRTG 1 cut(s) 48
Msp20I TGGCCA 1 cut(s) 672
MspA1I CMGCKG 1 cut(s) 1868
MspI CCGG 4 cut(s) 419, 837, 1526, 1628
MspR9I CCNGG 4 cut(s) 27, 419, 652, 1308
MunI CAATTG 3 cut(s) 240, 639, 1607
MvaI CCWGG 3 cut(s) 27, 652, 1308
NciI CCSGG 1 cut(s) 419
NdeII GATC 4 cut(s) 217, 395, 602, 1574
NheI GCTAGC 1 cut(s) 302
NlaIII CATG 8 cut(s) 101, 282, 785, 1074, 1419, 1926, 1934, 1951
NlaIV GGNNCC 1 cut(s) 1777
NmuCI GTSAC 2 cut(s) 234, 1642
NsiI ATGCAT 1 cut(s) 284
NspI RCATGY 3 cut(s) 282, 1926, 1951
OliI CACNNNNGTG 1 cut(s) 48
PaeI GCATGC 1 cut(s) 1951
PagI TCATGA 1 cut(s) 781
PaqCI CACCTGC 1 cut(s) 129
PciSI GCTCTTC 1 cut(s) 532
PfeI GAWTC 3 cut(s) 11, 564, 874
PflMI CCANNNNNTGG 3 cut(s) 245, 317, 1565
PkrI GCNGC 5 cut(s) 169, 575, 1400, 1765, 1870
PleI GAGTC 3 cut(s) 751, 1639, 1710
PpsI GAGTC 3 cut(s) 751, 1639, 1710
PshAI GACNNNNGTC 1 cut(s) 777
PsiI TTATAA 1 cut(s) 807
Psp124BI GAGCTC 2 cut(s) 527, 1178
Psp1406I AACGTT 1 cut(s) 117
Psp6I CCWGG 3 cut(s) 25, 650, 1306
PspFI CCCAGC 2 cut(s) 30, 286
PspGI CCWGG 3 cut(s) 25, 650, 1306
PspN4I GGNNCC 1 cut(s) 1777
PspPI GGNCC 2 cut(s) 1625, 1832
PstI CTGCAG 1 cut(s) 140
PstNI CAGNNNCTG 2 cut(s) 1398, 1463
PsuI RGATCY 1 cut(s) 1574
PvuII CAGCTG 1 cut(s) 1868
RsaI GTAC 7 cut(s) 204, 451, 484, 511, 847, 928, 1491
RsaNI GTAC 7 cut(s) 203, 450, 483, 510, 846, 927, 1490
RseI CAYNNNNRTG 1 cut(s) 48
SacI GAGCTC 2 cut(s) 527, 1178
SapI GCTCTTC 1 cut(s) 532
SaqAI TTAA 2 cut(s) 1043, 1379
SatI GCNGC 5 cut(s) 168, 574, 1399, 1764, 1869
Sau3AI GATC 4 cut(s) 217, 395, 602, 1574
Sau96I GGNCC 2 cut(s) 1625, 1832
ScaI AGTACT 1 cut(s) 484
SchI GAGTC 3 cut(s) 752, 1639, 1711
ScrFI CCNGG 4 cut(s) 27, 419, 652, 1308
SduI GDGCHC 3 cut(s) 527, 1178, 1423
SfaNI GCATC 5 cut(s) 291, 892, 1483, 1811, 1886
SfcI CTRYAG 1 cut(s) 136
SinI GGWCC 2 cut(s) 1625, 1832
SmiMI CAYNNNNRTG 1 cut(s) 48
SmlI CTYRAG 1 cut(s) 978
SmoI CTYRAG 1 cut(s) 978
SphI GCATGC 1 cut(s) 1951
SsiI CCGC 3 cut(s) 144, 1742, 1766
SspMI CTAG 5 cut(s) 303, 345, 435, 1188, 1857
SstI GAGCTC 2 cut(s) 527, 1178
StyD4I CCNGG 4 cut(s) 25, 417, 650, 1306
TaaI ACNGT 4 cut(s) 445, 609, 1501, 1723
TaiI ACGT 1 cut(s) 120
TaqI TCGA 4 cut(s) 275, 1018, 1316, 1919
TatI WGTACW 2 cut(s) 482, 509
TfiI GAWTC 3 cut(s) 11, 564, 874
Tru1I TTAA 2 cut(s) 1043, 1379
Tru9I TTAA 2 cut(s) 1043, 1379
TscAI CASTG 3 cut(s) 614, 712, 1516
TseFI GTSAC 2 cut(s) 234, 1642
TseI GCWGC 5 cut(s) 167, 573, 1398, 1763, 1868
Tsp45I GTSAC 2 cut(s) 234, 1642
TspGWI ACGGA 2 cut(s) 782, 1836
TspRI CASTG 3 cut(s) 614, 712, 1516
Van91I CCANNNNNTGG 3 cut(s) 245, 317, 1565
VpaK11BI GGWCC 2 cut(s) 1625, 1832
XapI RAATTY 3 cut(s) 55, 1096, 1323
XceI RCATGY 3 cut(s) 282, 1926, 1951
XcmI CCANNNNNNNNNTGG 1 cut(s) 680
XspI CTAG 5 cut(s) 303, 345, 435, 1188, 1857
ZrmI AGTACT 1 cut(s) 484
Zsp2I ATGCAT 1 cut(s) 284
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.