Nuclear pore complex protein
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| Species | Orthologous Gene IDs |
|---|---|
| malus_domestica | MD06G1125600.v1.1 |
| pyrus_communis | pycom06g11590 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 369 |
| Acc36I | ACCTGC | 1 cut(s) | 1336 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1220 |
| AccI | GTMKAC | 1 cut(s) | 1571 |
| AciI | CCGC | 6 cut(s) | 180, 427, 836, 947, 1421, 1479 |
| AclWI | GGATC | 2 cut(s) | 43, 250 |
| AcsI | RAATTY | 5 cut(s) | 401, 418, 748, 975, 1190 |
| AcuI | CTGAAG | 1 cut(s) | 890 |
| AfaI | GTAC | 7 cut(s) | 91, 124, 151, 502, 583, 1146, 1531 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 65, 494, 1022, 1220, 1289, 1566 |
| AflIII | ACRYGT | 1 cut(s) | 1526 |
| AhlI | ACTAGT | 1 cut(s) | 911 |
| AjnI | CCWGG | 1 cut(s) | 472 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1247, 1279 |
| Alw21I | GWGCWC | 3 cut(s) | 167, 830, 1078 |
| Alw26I | GTCTC | 3 cut(s) | 237, 693, 1218 |
| AlwI | GGATC | 2 cut(s) | 43, 250 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1118 |
| ApeKI | GCWGC | 5 cut(s) | 213, 319, 1050, 1415, 1418 |
| ApoI | RAATTY | 5 cut(s) | 401, 418, 748, 975, 1190 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 422 |
| AspLEI | GCGC | 2 cut(s) | 733, 1064 |
| AspS9I | GGNCC | 2 cut(s) | 1280, 1475 |
| AsuC2I | CCSGG | 1 cut(s) | 59 |
| AsuHPI | GGTGA | 2 cut(s) | 162, 1187 |
| AvaII | GGWCC | 2 cut(s) | 1280, 1475 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 1601, 1634 |
| BanII | GRGCYC | 3 cut(s) | 167, 830, 1078 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 246, 278 |
| BauI | CACGAG | 1 cut(s) | 1235 |
| BbsI | GAAGAC | 2 cut(s) | 339, 916 |
| Bbv12I | GWGCWC | 3 cut(s) | 167, 830, 1078 |
| BbvI | GCAGC | 5 cut(s) | 225, 331, 1037, 1402, 1405 |
| BccI | CCATC | 8 cut(s) | 14, 556, 571, 628, 661, 964, 1242, 1414 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1503, 1537 |
| BciT130I | CCWGG | 1 cut(s) | 474 |
| BcnI | CCSGG | 1 cut(s) | 59 |
| BcoDI | GTCTC | 3 cut(s) | 237, 693, 1218 |
| BcuI | ACTAGT | 1 cut(s) | 911 |
| BfaI | CTAG | 6 cut(s) | 75, 393, 840, 912, 1563, 1589 |
| BfmI | CTRYAG | 2 cut(s) | 281, 317 |
| BfuAI | ACCTGC | 1 cut(s) | 1336 |
| BglII | AGATCT | 1 cut(s) | 1229 |
| BisI | GCNGC | 6 cut(s) | 214, 320, 837, 1051, 1416, 1419 |
| BlsI | GCNGC | 6 cut(s) | 215, 321, 838, 1052, 1417, 1420 |
| BmcAI | AGTACT | 1 cut(s) | 91 |
| Bme1390I | CCNGG | 2 cut(s) | 59, 474 |
| Bme18I | GGWCC | 2 cut(s) | 1280, 1475 |
| BmgT120I | GGNCC | 2 cut(s) | 1280, 1475 |
| BmiI | GGNNCC | 2 cut(s) | 1432, 1477 |
| BmrFI | CCNGG | 2 cut(s) | 59, 474 |
| BmsI | GCATC | 4 cut(s) | 547, 1138, 1466, 1490 |
| BoxI | GACNNNNGTC | 1 cut(s) | 339 |
| BpiI | GAAGAC | 2 cut(s) | 339, 916 |
| BpmI | CTGGAG | 4 cut(s) | 594, 744, 1488, 1494 |
| BpuEI | CTTGAG | 1 cut(s) | 618 |
| BpuMI | CCSGG | 1 cut(s) | 59 |
| BsaJI | CCNNGG | 1 cut(s) | 57 |
| BsaWI | WCCGGW | 2 cut(s) | 1043, 1180 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 640, 670, 1516, 1546 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 65, 494, 1022, 1220, 1289, 1566 |
| Bse118I | RCCGGY | 2 cut(s) | 491, 1282 |
| Bse1I | ACTGG | 4 cut(s) | 1054, 1093, 1112, 1477 |
| Bse3DI | GCAATG | 1 cut(s) | 1410 |
| BseBI | CCWGG | 1 cut(s) | 474 |
| BseDI | CCNNGG | 1 cut(s) | 57 |
| BseGI | GGATG | 3 cut(s) | 538, 1189, 1406 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 65, 494, 1022, 1220, 1289, 1566 |
| BseMI | GCAATG | 1 cut(s) | 1410 |
| BseMII | CTCAG | 1 cut(s) | 1110 |
| BseNI | ACTGG | 4 cut(s) | 1054, 1093, 1112, 1477 |
| BseRI | GAGGAG | 2 cut(s) | 30, 820 |
| BseXI | GCAGC | 5 cut(s) | 225, 331, 1037, 1402, 1405 |
| BsgI | GTGCAG | 2 cut(s) | 528, 1314 |
| BsiHKAI | GWGCWC | 3 cut(s) | 167, 830, 1078 |
| BsiSI | CCGG | 5 cut(s) | 59, 492, 1044, 1181, 1283 |
| BslFI | GGGAC | 1 cut(s) | 558 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 65, 494, 1022, 1220, 1289, 1566 |
| BsmAI | GTCTC | 3 cut(s) | 237, 693, 1218 |
| BsmBI | CGTCTC | 1 cut(s) | 237 |
| BsmFI | GGGAC | 1 cut(s) | 558 |
| Bsp1286I | GDGCHC | 3 cut(s) | 167, 830, 1078 |
| Bsp143I | GATC | 4 cut(s) | 35, 191, 242, 1229 |
| BspACI | CCGC | 6 cut(s) | 180, 427, 836, 947, 1421, 1479 |
| BspCNI | CTCAG | 1 cut(s) | 1111 |
| BspLI | GGNNCC | 2 cut(s) | 1432, 1477 |
| BspMAI | CTGCAG | 2 cut(s) | 285, 321 |
| BspMI | ACCTGC | 1 cut(s) | 1336 |
| BspPI | GGATC | 2 cut(s) | 43, 250 |
| BspQI | GCTCTTC | 1 cut(s) | 172 |
| BsrDI | GCAATG | 1 cut(s) | 1410 |
| BsrFI | RCCGGY | 2 cut(s) | 491, 1282 |
| BsrI | ACTGG | 4 cut(s) | 1054, 1093, 1112, 1477 |
| BssAI | RCCGGY | 2 cut(s) | 491, 1282 |
| BssECI | CCNNGG | 1 cut(s) | 57 |
| BssMI | GATC | 4 cut(s) | 35, 191, 242, 1229 |
| BssSI | CACGAG | 1 cut(s) | 1235 |
| Bst2BI | CACGAG | 1 cut(s) | 1235 |
| Bst2UI | CCWGG | 1 cut(s) | 474 |
| Bst4CI | ACNGT | 3 cut(s) | 85, 1156, 1378 |
| Bst6I | CTCTTC | 2 cut(s) | 172, 909 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 280 |
| BstC8I | GCNNGC | 2 cut(s) | 735, 1423 |
| BstDEI | CTNAG | 2 cut(s) | 446, 1119 |
| BstF5I | GGATG | 3 cut(s) | 538, 1189, 1406 |
| BstHHI | GCGC | 2 cut(s) | 733, 1064 |
| BstKTI | GATC | 4 cut(s) | 38, 194, 245, 1232 |
| BstMAI | GTCTC | 3 cut(s) | 237, 693, 1218 |
| BstMBI | GATC | 4 cut(s) | 35, 191, 242, 1229 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 113, 280, 1059 |
| BstNI | CCWGG | 1 cut(s) | 474 |
| BstNSI | RCATGY | 1 cut(s) | 1530 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 339 |
| BstSCI | CCNGG | 2 cut(s) | 57, 472 |
| BstSFI | CTRYAG | 2 cut(s) | 281, 317 |
| BstV1I | GCAGC | 5 cut(s) | 225, 331, 1037, 1402, 1405 |
| BstV2I | GAAGAC | 2 cut(s) | 339, 916 |
| BstX2I | RGATCY | 1 cut(s) | 1229 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 110 |
| BstYI | RGATCY | 1 cut(s) | 1229 |
| BtsCI | GGATG | 3 cut(s) | 538, 1189, 1406 |
| BtsI | GCAGTG | 3 cut(s) | 269, 1095, 1164 |
| BtsIMutI | CAGTG | 3 cut(s) | 269, 1095, 1164 |
| BveI | ACCTGC | 1 cut(s) | 1336 |
| Cac8I | GCNNGC | 2 cut(s) | 735, 1423 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1118 |
| CfoI | GCGC | 2 cut(s) | 733, 1064 |
| Cfr10I | RCCGGY | 2 cut(s) | 491, 1282 |
| Cfr13I | GGNCC | 2 cut(s) | 1280, 1475 |
| Csp6I | GTAC | 7 cut(s) | 90, 123, 150, 501, 582, 1145, 1530 |
| CspCI | CAANNNNNGTGG | 4 cut(s) | 781, 816, 943, 978 |
| CviAII | CATG | 5 cut(s) | 723, 1068, 1454, 1527, 1668 |
| CviQI | GTAC | 7 cut(s) | 90, 123, 150, 501, 582, 1145, 1530 |
| DdeI | CTNAG | 2 cut(s) | 446, 1119 |
| DpnI | GATC | 4 cut(s) | 37, 193, 244, 1231 |
| DpnII | GATC | 4 cut(s) | 35, 191, 242, 1229 |
| Eam1104I | CTCTTC | 2 cut(s) | 172, 909 |
| EarI | CTCTTC | 2 cut(s) | 172, 909 |
| Ecl136II | GAGCTC | 3 cut(s) | 165, 828, 1076 |
| Eco24I | GRGCYC | 3 cut(s) | 167, 830, 1078 |
| Eco47I | GGWCC | 2 cut(s) | 1280, 1475 |
| Eco53kI | GAGCTC | 3 cut(s) | 165, 828, 1076 |
| Eco57I | CTGAAG | 1 cut(s) | 890 |
| EcoICRI | GAGCTC | 3 cut(s) | 165, 828, 1076 |
| EcoRI | GAATTC | 1 cut(s) | 975 |
| EcoRII | CCWGG | 1 cut(s) | 472 |
| EcoT22I | ATGCAT | 1 cut(s) | 1459 |
| EcoT38I | GRGCYC | 3 cut(s) | 167, 830, 1078 |
| Esp3I | CGTCTC | 1 cut(s) | 237 |
| FaeI | CATG | 5 cut(s) | 726, 1071, 1457, 1530, 1671 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 372, 404 |
| FaqI | GGGAC | 1 cut(s) | 558 |
| FatI | CATG | 5 cut(s) | 722, 1067, 1453, 1526, 1667 |
| FauI | CCCGC | 2 cut(s) | 1414, 1486 |
| FblI | GTMKAC | 1 cut(s) | 1571 |
| Fnu4HI | GCNGC | 6 cut(s) | 214, 320, 837, 1051, 1416, 1419 |
| FokI | GGATG | 3 cut(s) | 525, 1196, 1393 |
| FriOI | GRGCYC | 3 cut(s) | 167, 830, 1078 |
| Fsp4HI | GCNGC | 6 cut(s) | 214, 320, 837, 1051, 1416, 1419 |
| FspBI | CTAG | 6 cut(s) | 75, 393, 840, 912, 1563, 1589 |
| GlaI | GCGC | 2 cut(s) | 732, 1063 |
| GluI | GCNGC | 6 cut(s) | 214, 320, 837, 1051, 1416, 1419 |
| GsuI | CTGGAG | 4 cut(s) | 594, 744, 1488, 1494 |
| HapII | CCGG | 5 cut(s) | 59, 492, 1044, 1181, 1283 |
| HhaI | GCGC | 2 cut(s) | 733, 1064 |
| Hin1II | CATG | 5 cut(s) | 726, 1071, 1457, 1530, 1671 |
| Hin6I | GCGC | 2 cut(s) | 731, 1062 |
| HinP1I | GCGC | 2 cut(s) | 731, 1062 |
| HindIII | AAGCTT | 2 cut(s) | 105, 1000 |
| HinfI | GANTC | 5 cut(s) | 204, 307, 1300, 1357, 1664 |
| HpaII | CCGG | 5 cut(s) | 59, 492, 1044, 1181, 1283 |
| HphI | GGTGA | 2 cut(s) | 162, 1187 |
| Hpy166II | GTNNAC | 5 cut(s) | 152, 443, 1178, 1280, 1572 |
| Hpy188I | TCNGA | 7 cut(s) | 8, 203, 247, 417, 909, 987, 1120 |
| Hpy188III | TCNNGA | 3 cut(s) | 611, 714, 1235 |
| Hpy8I | GTNNAC | 5 cut(s) | 152, 443, 1178, 1280, 1572 |
| HpyAV | CCTTC | 4 cut(s) | 669, 1509, 1592, 1633 |
| HpyCH4III | ACNGT | 3 cut(s) | 85, 1156, 1378 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 113, 280, 1059 |
| HpyF3I | CTNAG | 2 cut(s) | 446, 1119 |
| Hsp92II | CATG | 5 cut(s) | 726, 1071, 1457, 1530, 1671 |
| HspAI | GCGC | 2 cut(s) | 731, 1062 |
| Kzo9I | GATC | 4 cut(s) | 35, 191, 242, 1229 |
| LguI | GCTCTTC | 1 cut(s) | 172 |
| LmnI | GCTCC | 9 cut(s) | 44, 83, 613, 825, 833, 1073, 1399, 1430, 1513 |
| Lsp1109I | GCAGC | 5 cut(s) | 225, 331, 1037, 1402, 1405 |
| LweI | GCATC | 4 cut(s) | 547, 1138, 1466, 1490 |
| MaeI | CTAG | 6 cut(s) | 75, 393, 840, 912, 1563, 1589 |
| MaeIII | GTNAC | 4 cut(s) | 341, 409, 1156, 1297 |
| MalI | GATC | 4 cut(s) | 37, 193, 244, 1231 |
| MboI | GATC | 4 cut(s) | 35, 191, 242, 1229 |
| MfeI | CAATTG | 2 cut(s) | 858, 1262 |
| MflI | RGATCY | 1 cut(s) | 1229 |
| MhlI | GDGCHC | 3 cut(s) | 167, 830, 1078 |
| MlyI | GAGTC | 3 cut(s) | 316, 1294, 1366 |
| Mph1103I | ATGCAT | 1 cut(s) | 1459 |
| MroXI | GAANNNNTTC | 1 cut(s) | 422 |
| MseI | TTAA | 3 cut(s) | 458, 695, 1031 |
| MspA1I | CMGCKG | 1 cut(s) | 1615 |
| MspI | CCGG | 5 cut(s) | 59, 492, 1044, 1181, 1283 |
| MspR9I | CCNGG | 2 cut(s) | 59, 474 |
| MunI | CAATTG | 2 cut(s) | 858, 1262 |
| MvaI | CCWGG | 1 cut(s) | 474 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 113, 280, 1059 |
| NciI | CCSGG | 1 cut(s) | 59 |
| NdeII | GATC | 4 cut(s) | 35, 191, 242, 1229 |
| NlaIII | CATG | 5 cut(s) | 726, 1071, 1457, 1530, 1671 |
| NlaIV | GGNNCC | 2 cut(s) | 1432, 1477 |
| NmuCI | GTSAC | 2 cut(s) | 341, 1297 |
| NsiI | ATGCAT | 1 cut(s) | 1459 |
| NspI | RCATGY | 1 cut(s) | 1530 |
| PciI | ACATGT | 1 cut(s) | 1526 |
| PciSI | GCTCTTC | 1 cut(s) | 172 |
| PdmI | GAANNNNTTC | 1 cut(s) | 422 |
| PfeI | GAWTC | 2 cut(s) | 204, 1664 |
| PflFI | GACNNNGTC | 1 cut(s) | 709 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1220 |
| PkrI | GCNGC | 6 cut(s) | 215, 321, 838, 1052, 1417, 1420 |
| PleI | GAGTC | 3 cut(s) | 315, 1294, 1365 |
| PpsI | GAGTC | 3 cut(s) | 315, 1294, 1365 |
| PscI | ACATGT | 1 cut(s) | 1526 |
| PshAI | GACNNNNGTC | 1 cut(s) | 339 |
| PsiI | TTATAA | 1 cut(s) | 369 |
| Psp124BI | GAGCTC | 3 cut(s) | 167, 830, 1078 |
| Psp6I | CCWGG | 1 cut(s) | 472 |
| PspGI | CCWGG | 1 cut(s) | 472 |
| PspN4I | GGNNCC | 2 cut(s) | 1432, 1477 |
| PspPI | GGNCC | 2 cut(s) | 1280, 1475 |
| PstI | CTGCAG | 2 cut(s) | 285, 321 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1118 |
| PsuI | RGATCY | 1 cut(s) | 1229 |
| PsyI | GACNNNGTC | 1 cut(s) | 709 |
| PvuII | CAGCTG | 1 cut(s) | 1615 |
| RsaI | GTAC | 7 cut(s) | 91, 124, 151, 502, 583, 1146, 1531 |
| RsaNI | GTAC | 7 cut(s) | 90, 123, 150, 501, 582, 1145, 1530 |
| SacI | GAGCTC | 3 cut(s) | 167, 830, 1078 |
| SapI | GCTCTTC | 1 cut(s) | 172 |
| SaqAI | TTAA | 3 cut(s) | 458, 695, 1031 |
| SatI | GCNGC | 6 cut(s) | 214, 320, 837, 1051, 1416, 1419 |
| Sau3AI | GATC | 4 cut(s) | 35, 191, 242, 1229 |
| Sau96I | GGNCC | 2 cut(s) | 1280, 1475 |
| ScaI | AGTACT | 1 cut(s) | 91 |
| SchI | GAGTC | 3 cut(s) | 316, 1294, 1366 |
| ScrFI | CCNGG | 2 cut(s) | 59, 474 |
| SduI | GDGCHC | 3 cut(s) | 167, 830, 1078 |
| SfaNI | GCATC | 4 cut(s) | 547, 1138, 1466, 1490 |
| SfcI | CTRYAG | 2 cut(s) | 281, 317 |
| SinI | GGWCC | 2 cut(s) | 1280, 1475 |
| SmlI | CTYRAG | 1 cut(s) | 633 |
| SmoI | CTYRAG | 1 cut(s) | 633 |
| SpeI | ACTAGT | 1 cut(s) | 911 |
| SsiI | CCGC | 6 cut(s) | 180, 427, 836, 947, 1421, 1479 |
| SspMI | CTAG | 6 cut(s) | 75, 393, 840, 912, 1563, 1589 |
| SstI | GAGCTC | 3 cut(s) | 167, 830, 1078 |
| StyD4I | CCNGG | 2 cut(s) | 57, 472 |
| TaaI | ACNGT | 3 cut(s) | 85, 1156, 1378 |
| TaqI | TCGA | 6 cut(s) | 596, 670, 704, 968, 1523, 1637 |
| TatI | WGTACW | 3 cut(s) | 89, 149, 1529 |
| TauI | GCSGC | 1 cut(s) | 839 |
| TfiI | GAWTC | 2 cut(s) | 204, 1664 |
| Tru1I | TTAA | 3 cut(s) | 458, 695, 1031 |
| Tru9I | TTAA | 3 cut(s) | 458, 695, 1031 |
| TscAI | CASTG | 3 cut(s) | 276, 1102, 1171 |
| TseFI | GTSAC | 2 cut(s) | 341, 1297 |
| TseI | GCWGC | 5 cut(s) | 213, 319, 1050, 1415, 1418 |
| Tsp45I | GTSAC | 2 cut(s) | 341, 1297 |
| TspGWI | ACGGA | 2 cut(s) | 344, 444 |
| TspRI | CASTG | 3 cut(s) | 276, 1102, 1171 |
| Tth111I | GACNNNGTC | 1 cut(s) | 709 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1220 |
| VpaK11BI | GGWCC | 2 cut(s) | 1280, 1475 |
| XapI | RAATTY | 5 cut(s) | 401, 418, 748, 975, 1190 |
| XceI | RCATGY | 1 cut(s) | 1530 |
| XmiI | GTMKAC | 1 cut(s) | 1571 |
| XmnI | GAANNNNTTC | 1 cut(s) | 422 |
| XspI | CTAG | 6 cut(s) | 75, 393, 840, 912, 1563, 1589 |
| ZrmI | AGTACT | 1 cut(s) | 91 |
| Zsp2I | ATGCAT | 1 cut(s) | 1459 |