heat shock
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| malus_domestica | MD07G1116300.v1.1 |
| rosa_chinensis | RchiOBHm_Chr1g0366631 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccII | CGCG | 1 cut(s) | 29 |
| AciI | CCGC | 5 cut(s) | 29, 148, 171, 174, 246 |
| AclWI | GGATC | 1 cut(s) | 158 |
| AcsI | RAATTY | 1 cut(s) | 282 |
| AgsI | TTSAA | 1 cut(s) | 88 |
| Alw26I | GTCTC | 2 cut(s) | 245, 268 |
| AlwI | GGATC | 1 cut(s) | 158 |
| AoxI | GGCC | 1 cut(s) | 105 |
| ApoI | RAATTY | 1 cut(s) | 282 |
| AspS9I | GGNCC | 1 cut(s) | 4 |
| AsuHPI | GGTGA | 1 cut(s) | 64 |
| AvaII | GGWCC | 1 cut(s) | 4 |
| BanII | GRGCYC | 1 cut(s) | 138 |
| BccI | CCATC | 2 cut(s) | 43, 185 |
| BceAI | ACGGC | 1 cut(s) | 47 |
| BcoDI | GTCTC | 2 cut(s) | 245, 268 |
| BisI | GCNGC | 2 cut(s) | 171, 174 |
| BlsI | GCNGC | 2 cut(s) | 172, 175 |
| Bme18I | GGWCC | 1 cut(s) | 4 |
| BmgT120I | GGNCC | 1 cut(s) | 4 |
| BsaJI | CCNNGG | 2 cut(s) | 111, 241 |
| BseDI | CCNNGG | 2 cut(s) | 111, 241 |
| BseMII | CTCAG | 1 cut(s) | 110 |
| Bsh1236I | CGCG | 1 cut(s) | 29 |
| BshFI | GGCC | 1 cut(s) | 107 |
| BslFI | GGGAC | 1 cut(s) | 59 |
| BsmAI | GTCTC | 2 cut(s) | 245, 268 |
| BsmFI | GGGAC | 1 cut(s) | 59 |
| BsnI | GGCC | 1 cut(s) | 107 |
| Bsp1286I | GDGCHC | 1 cut(s) | 138 |
| Bsp143I | GATC | 2 cut(s) | 24, 150 |
| BspACI | CCGC | 5 cut(s) | 29, 148, 171, 174, 246 |
| BspANI | GGCC | 1 cut(s) | 107 |
| BspCNI | CTCAG | 1 cut(s) | 109 |
| BspFNI | CGCG | 1 cut(s) | 29 |
| BspPI | GGATC | 1 cut(s) | 158 |
| BssECI | CCNNGG | 2 cut(s) | 111, 241 |
| BssMI | GATC | 2 cut(s) | 24, 150 |
| BssT1I | CCWWGG | 2 cut(s) | 111, 241 |
| Bst4CI | ACNGT | 1 cut(s) | 73 |
| BstC8I | GCNNGC | 1 cut(s) | 105 |
| BstDEI | CTNAG | 1 cut(s) | 96 |
| BstFNI | CGCG | 1 cut(s) | 29 |
| BstKTI | GATC | 2 cut(s) | 27, 153 |
| BstMAI | GTCTC | 2 cut(s) | 245, 268 |
| BstMBI | GATC | 2 cut(s) | 24, 150 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 179 |
| BstUI | CGCG | 1 cut(s) | 29 |
| BsuRI | GGCC | 1 cut(s) | 107 |
| BtgZI | GCGATG | 1 cut(s) | 163 |
| Cac8I | GCNNGC | 1 cut(s) | 105 |
| Cfr13I | GGNCC | 1 cut(s) | 4 |
| CseI | GACGC | 1 cut(s) | 125 |
| CviAII | CATG | 1 cut(s) | 145 |
| CviJI | RGCY | 5 cut(s) | 107, 136, 163, 170, 190 |
| CviKI_1 | RGCY | 5 cut(s) | 107, 136, 163, 170, 190 |
| DdeI | CTNAG | 1 cut(s) | 96 |
| DpnI | GATC | 2 cut(s) | 26, 152 |
| DpnII | GATC | 2 cut(s) | 24, 150 |
| EciI | GGCGGA | 1 cut(s) | 261 |
| Eco130I | CCWWGG | 2 cut(s) | 111, 241 |
| Eco24I | GRGCYC | 1 cut(s) | 138 |
| Eco47I | GGWCC | 1 cut(s) | 4 |
| EcoT14I | CCWWGG | 2 cut(s) | 111, 241 |
| EcoT38I | GRGCYC | 1 cut(s) | 138 |
| ErhI | CCWWGG | 2 cut(s) | 111, 241 |
| FaeI | CATG | 1 cut(s) | 148 |
| FaiI | YATR | 2 cut(s) | 37, 146 |
| FaqI | GGGAC | 1 cut(s) | 59 |
| FatI | CATG | 1 cut(s) | 144 |
| Fnu4HI | GCNGC | 2 cut(s) | 171, 174 |
| FriOI | GRGCYC | 1 cut(s) | 138 |
| Fsp4HI | GCNGC | 2 cut(s) | 171, 174 |
| GluI | GCNGC | 2 cut(s) | 171, 174 |
| HaeIII | GGCC | 1 cut(s) | 107 |
| HgaI | GACGC | 1 cut(s) | 125 |
| Hin1II | CATG | 1 cut(s) | 148 |
| HinfI | GANTC | 2 cut(s) | 32, 92 |
| HphI | GGTGA | 1 cut(s) | 64 |
| Hpy188I | TCNGA | 3 cut(s) | 48, 99, 273 |
| Hpy188III | TCNNGA | 4 cut(s) | 7, 67, 207, 229 |
| Hpy99I | CGWCG | 1 cut(s) | 68 |
| HpyAV | CCTTC | 2 cut(s) | 13, 193 |
| HpyCH4III | ACNGT | 1 cut(s) | 73 |
| HpyCH4IV | ACGT | 2 cut(s) | 141, 225 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 179 |
| HpyF3I | CTNAG | 1 cut(s) | 96 |
| HpySE526I | ACGT | 2 cut(s) | 141, 225 |
| Hsp92II | CATG | 1 cut(s) | 148 |
| Kzo9I | GATC | 2 cut(s) | 24, 150 |
| LpnPI | CCDG | 6 cut(s) | 20, 26, 89, 105, 117, 242 |
| MaeII | ACGT | 2 cut(s) | 141, 225 |
| MaeIII | GTNAC | 1 cut(s) | 67 |
| MalI | GATC | 2 cut(s) | 26, 152 |
| MboI | GATC | 2 cut(s) | 24, 150 |
| MboII | GAAGA | 2 cut(s) | 25, 67 |
| MhlI | GDGCHC | 1 cut(s) | 138 |
| MluCI | AATT | 1 cut(s) | 282 |
| MlyI | GAGTC | 2 cut(s) | 41, 86 |
| MnlI | CCTC | 1 cut(s) | 93 |
| MvnI | CGCG | 1 cut(s) | 29 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 179 |
| NdeII | GATC | 2 cut(s) | 24, 150 |
| NlaIII | CATG | 1 cut(s) | 148 |
| NmuCI | GTSAC | 1 cut(s) | 67 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 272 |
| PkrI | GCNGC | 2 cut(s) | 172, 175 |
| PleI | GAGTC | 2 cut(s) | 40, 86 |
| PpsI | GAGTC | 2 cut(s) | 40, 86 |
| PspPI | GGNCC | 1 cut(s) | 4 |
| SatI | GCNGC | 2 cut(s) | 171, 174 |
| Sau3AI | GATC | 2 cut(s) | 24, 150 |
| Sau96I | GGNCC | 1 cut(s) | 4 |
| SchI | GAGTC | 2 cut(s) | 41, 86 |
| SduI | GDGCHC | 1 cut(s) | 138 |
| SetI | ASST | 5 cut(s) | 83, 144, 204, 228, 243 |
| SinI | GGWCC | 1 cut(s) | 4 |
| Sse9I | AATT | 1 cut(s) | 282 |
| SsiI | CCGC | 5 cut(s) | 29, 148, 171, 174, 246 |
| StyI | CCWWGG | 2 cut(s) | 111, 241 |
| TaaI | ACNGT | 1 cut(s) | 73 |
| TaiI | ACGT | 2 cut(s) | 144, 228 |
| TaqI | TCGA | 3 cut(s) | 206, 237, 258 |
| TasI | AATT | 1 cut(s) | 282 |
| TauI | GCSGC | 2 cut(s) | 173, 176 |
| TseFI | GTSAC | 1 cut(s) | 67 |
| Tsp45I | GTSAC | 1 cut(s) | 67 |
| TspDTI | ATGAA | 1 cut(s) | 32 |
| VpaK11BI | GGWCC | 1 cut(s) | 4 |
| XapI | RAATTY | 1 cut(s) | 282 |