MD07G1140700.v1.1

This protein plays a role in synthesis of starch. It catalyzes the synthesis of the activated glycosyl donor, ADP- glucose from Glc-1-P and ATP

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr07
Physical Location & Seq
Forward (+)
20388393 .. 20393455
5063 bp
Loading structure...
UTR
Exon/CDS
Intron
MD07G1140700.v1.1.491

Sequence Viewer

Length: 366 bp
ATGGGAATATATTATGTTGTAGAGGTGTACTTTACCTTCGTGCTATTTCTCATCTTTGAAGAGGATGAACTTCCTTCTACAATTATGGTTCACAGTGTCGATATGAATTTGCTTCCTTGTCTTGTTAAGGAAGGTGATTGCATAATCCACCGAGTTGGGAAAAAGGGTAAAATCAGTTATGGGTGGCTATATGTAGGAATGCATGGATACATTGATAGGAAAATCTCATTATTTTGTTGGTCTTTTATCTTGAACACTTGTAAACATGTTCTTTATGAGGAATATTTCTGTAGTTTCATTATAGACATTCCGTTCCTACTATTGGATTGCTTTTTACAGCCGAGACTACCATCTTGGATTTTATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
Pfam Domains
Protein Families

Protein Analysis

122

Amino Acids

14.3

Weight (kDa)

5.43

Isoelectric Point (pI)

33.89

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0028848)

Species Orthologous Gene IDs
malus_domestica MD07G1140700.v1.1
pyrus_communis pycom08g13430

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcsI RAATTY 1 cut(s) 106
AfaI GTAC 1 cut(s) 29
AfiI CCNNNNNNNGG 1 cut(s) 322
AflIII ACRYGT 1 cut(s) 265
AgsI TTSAA 2 cut(s) 59, 253
Alw26I GTCTC 1 cut(s) 337
ApoI RAATTY 1 cut(s) 106
AsuHPI GGTGA 1 cut(s) 146
BarI GAAGNNNNNNTAC 2 cut(s) 20, 52
BccI CCATC 1 cut(s) 358
BciVI GTATCC 1 cut(s) 200
BcoDI GTCTC 1 cut(s) 337
BfmI CTRYAG 1 cut(s) 289
BfuI GTATCC 1 cut(s) 200
Bsc4I CCNNNNNNNGG 1 cut(s) 322
BseGI GGATG 1 cut(s) 70
BseLI CCNNNNNNNGG 1 cut(s) 322
BslI CCNNNNNNNGG 1 cut(s) 322
BsmAI GTCTC 1 cut(s) 337
BsmI GAATGC 1 cut(s) 204
Bst4CI ACNGT 1 cut(s) 95
Bst6I CTCTTC 1 cut(s) 54
BstF5I GGATG 1 cut(s) 70
BstMAI GTCTC 1 cut(s) 337
BstNSI RCATGY 1 cut(s) 269
BstSFI CTRYAG 1 cut(s) 289
BstXI CCANNNNNNTGG 1 cut(s) 155
BsuI GTATCC 1 cut(s) 200
BtsCI GGATG 1 cut(s) 70
BtsIMutI CAGTG 1 cut(s) 100
Csp6I GTAC 1 cut(s) 28
CviAII CATG 2 cut(s) 203, 266
CviJI RGCY 2 cut(s) 187, 340
CviKI_1 RGCY 2 cut(s) 187, 340
CviQI GTAC 1 cut(s) 28
Eam1104I CTCTTC 1 cut(s) 54
EarI CTCTTC 1 cut(s) 54
EcoT22I ATGCAT 1 cut(s) 204
FaeI CATG 2 cut(s) 206, 269
FatI CATG 2 cut(s) 202, 265
FokI GGATG 1 cut(s) 77
Hin1II CATG 2 cut(s) 206, 269
HphI GGTGA 1 cut(s) 146
Hpy166II GTNNAC 3 cut(s) 28, 91, 263
Hpy188III TCNNGA 1 cut(s) 250
Hpy8I GTNNAC 3 cut(s) 28, 91, 263
HpyAV CCTTC 3 cut(s) 46, 84, 125
HpyCH4III ACNGT 1 cut(s) 95
HpyCH4V TGCA 2 cut(s) 141, 202
Hsp92II CATG 2 cut(s) 206, 269
MboII GAAGA 1 cut(s) 71
MluCI AATT 2 cut(s) 81, 106
MnlI CCTC 3 cut(s) 16, 55, 271
Mph1103I ATGCAT 1 cut(s) 204
MseI TTAA 1 cut(s) 126
Mva1269I GAATGC 1 cut(s) 204
NlaIII CATG 2 cut(s) 206, 269
NmeAIII GCCGAG 1 cut(s) 366
NsiI ATGCAT 1 cut(s) 204
NspI RCATGY 1 cut(s) 269
PciI ACATGT 1 cut(s) 265
PctI GAATGC 1 cut(s) 204
PscI ACATGT 1 cut(s) 265
RsaI GTAC 1 cut(s) 29
RsaNI GTAC 1 cut(s) 28
SaqAI TTAA 1 cut(s) 126
SetI ASST 3 cut(s) 27, 38, 136
SfcI CTRYAG 1 cut(s) 289
SgeI CNNG 9 cut(s) 52, 129, 134, 164, 215, 262, 270, 278, 354
Sse9I AATT 2 cut(s) 81, 106
SspI AATATT 1 cut(s) 284
TaaI ACNGT 1 cut(s) 95
TaqI TCGA 1 cut(s) 99
TasI AATT 2 cut(s) 81, 106
TatI WGTACW 1 cut(s) 27
Tru1I TTAA 1 cut(s) 126
Tru9I TTAA 1 cut(s) 126
TscAI CASTG 1 cut(s) 100
TspDTI ATGAA 3 cut(s) 81, 119, 286
TspGWI ACGGA 1 cut(s) 300
TspRI CASTG 1 cut(s) 100
XapI RAATTY 1 cut(s) 106
XceI RCATGY 1 cut(s) 269
Zsp2I ATGCAT 1 cut(s) 204
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.