MD09G1132700.v1.1

Alcohol dehydrogenase GroES-like domain

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr09
Physical Location & Seq
Reverse (-)
10190502 .. 10192371
1870 bp
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UTR
Exon/CDS
Intron
MD09G1132700.v1.1.491

Sequence Viewer

Length: 210 bp
ATGCAAAACCAGCCTTCTTTCCTGCACAAAAAACTGGATTTTGCAACAGCGGTTGCATGGGCAGCAGGGAAGCTGTTGGTGATGGAAAGGGTGAAGGTTGCTCCACCTAAGGCCATGGAAATGAGGGTAAAGGTCAAATATACCTCAGTTTATCACACTAAACTCTACTTCTGCCGAAGGTCAGCAATAATATCTACTACATACATATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
Pfam Domains
Protein Families

Protein Analysis

70

Amino Acids

7.96

Weight (kDa)

10.15

Isoelectric Point (pI)

22.31

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0024304)

Species Orthologous Gene IDs
malus_domestica MD09G1132700.v1.1
pyrus_communis pycom02g04820 pycom07g05350

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 50
AluBI AGCT 1 cut(s) 73
AluI AGCT 1 cut(s) 73
AoxI GGCC 1 cut(s) 111
ApeKI GCWGC 1 cut(s) 62
AsuHPI GGTGA 2 cut(s) 91, 103
AxyI CCTNAGG 1 cut(s) 108
BbvI GCAGC 1 cut(s) 74
BccI CCATC 1 cut(s) 76
BisI GCNGC 1 cut(s) 63
BlsI GCNGC 1 cut(s) 64
BsaJI CCNNGG 1 cut(s) 114
Bse1I ACTGG 1 cut(s) 39
Bse21I CCTNAGG 1 cut(s) 108
BseDI CCNNGG 1 cut(s) 114
BseMII CTCAG 1 cut(s) 159
BseNI ACTGG 1 cut(s) 39
BseXI GCAGC 1 cut(s) 74
BsgI GTGCAG 1 cut(s) 8
BshFI GGCC 1 cut(s) 113
BsnI GGCC 1 cut(s) 113
Bsp19I CCATGG 1 cut(s) 114
BspACI CCGC 1 cut(s) 50
BspANI GGCC 1 cut(s) 113
BspCNI CTCAG 1 cut(s) 158
BsrI ACTGG 1 cut(s) 39
BssECI CCNNGG 1 cut(s) 114
BssT1I CCWWGG 1 cut(s) 114
BstDEI CTNAG 2 cut(s) 108, 145
BstDSI CCRYGG 1 cut(s) 114
BstMWI GCNNNNNNNGC 2 cut(s) 10, 62
BstV1I GCAGC 1 cut(s) 74
Bsu36I CCTNAGG 1 cut(s) 108
BsuRI GGCC 1 cut(s) 113
BtgI CCRYGG 1 cut(s) 114
CviAII CATG 2 cut(s) 57, 115
CviJI RGCY 3 cut(s) 13, 73, 113
CviKI_1 RGCY 3 cut(s) 13, 73, 113
DdeI CTNAG 2 cut(s) 108, 145
Eco130I CCWWGG 1 cut(s) 114
Eco81I CCTNAGG 1 cut(s) 108
EcoT14I CCWWGG 1 cut(s) 114
ErhI CCWWGG 1 cut(s) 114
FaeI CATG 2 cut(s) 60, 118
FaiI YATR 6 cut(s) 58, 116, 141, 202, 206, 208
FatI CATG 2 cut(s) 56, 114
Fnu4HI GCNGC 1 cut(s) 63
Fsp4HI GCNGC 1 cut(s) 63
GluI GCNGC 1 cut(s) 63
HaeIII GGCC 1 cut(s) 113
Hin1II CATG 2 cut(s) 60, 118
HphI GGTGA 2 cut(s) 91, 103
HpyAV CCTTC 3 cut(s) 24, 88, 171
HpyCH4V TGCA 4 cut(s) 4, 25, 44, 56
HpyF10VI GCNNNNNNNGC 2 cut(s) 10, 62
HpyF3I CTNAG 2 cut(s) 108, 145
Hsp92II CATG 2 cut(s) 60, 118
LmnI GCTCC 1 cut(s) 106
LpnPI CCDG 4 cut(s) 20, 23, 35, 51
Lsp1109I GCAGC 1 cut(s) 74
MnlI CCTC 2 cut(s) 117, 154
MslI CAYNNNNRTG 1 cut(s) 119
MspA1I CMGCKG 1 cut(s) 50
MwoI GCNNNNNNNGC 2 cut(s) 10, 62
NcoI CCATGG 1 cut(s) 114
NlaIII CATG 2 cut(s) 60, 118
PkrI GCNGC 1 cut(s) 64
RseI CAYNNNNRTG 1 cut(s) 119
SatI GCNGC 1 cut(s) 63
SetI ASST 6 cut(s) 75, 99, 109, 135, 146, 182
SgeI CNNG 6 cut(s) 22, 34, 47, 69, 78, 127
SmiMI CAYNNNNRTG 1 cut(s) 119
SsiI CCGC 1 cut(s) 50
StyI CCWWGG 1 cut(s) 114
TseI GCWGC 1 cut(s) 62
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.