pycom07g05350

Alcohol dehydrogenase GroES-like domain

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr7
Physical Location & Seq
Forward (+)
4619901 .. 4620918
1018 bp
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UTR
Exon/CDS
Intron
pycom07g05350.1

Sequence Viewer

Length: 183 bp
ATGGCCTCCAATCATCATTCATTTGAAGATTTTGCAACAGCGGTTGCATGGGAAGCAGGGAAGCTGTTGGTGATGGAGAGGGTGAAGATTGCTCTACCTAAGGCCATGGAAATGAGGATAAAGGTCAAATATACCTCAGTTTATCACATTGAACTCTACTTCTGCCGAAGTTTATATGGTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
Pfam Domains
Protein Families

Protein Analysis

61

Amino Acids

6.98

Weight (kDa)

8.85

Isoelectric Point (pI)

27.7

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0024304)

Species Orthologous Gene IDs
malus_domestica MD09G1132700.v1.1
pyrus_communis pycom02g04820 pycom07g05350

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 41
AgsI TTSAA 2 cut(s) 26, 152
AluBI AGCT 1 cut(s) 64
AluI AGCT 1 cut(s) 64
AoxI GGCC 2 cut(s) 3, 102
AsuHPI GGTGA 2 cut(s) 82, 94
AxyI CCTNAGG 1 cut(s) 99
BccI CCATC 1 cut(s) 67
BsaJI CCNNGG 1 cut(s) 105
Bse21I CCTNAGG 1 cut(s) 99
BseDI CCNNGG 1 cut(s) 105
BseMII CTCAG 1 cut(s) 150
BshFI GGCC 2 cut(s) 5, 104
BsnI GGCC 2 cut(s) 5, 104
Bsp19I CCATGG 1 cut(s) 105
BspACI CCGC 1 cut(s) 41
BspANI GGCC 2 cut(s) 5, 104
BspCNI CTCAG 1 cut(s) 149
BssECI CCNNGG 1 cut(s) 105
BssT1I CCWWGG 1 cut(s) 105
BstDEI CTNAG 2 cut(s) 99, 136
BstDSI CCRYGG 1 cut(s) 105
BstMWI GCNNNNNNNGC 1 cut(s) 53
Bsu36I CCTNAGG 1 cut(s) 99
BsuRI GGCC 2 cut(s) 5, 104
BtgI CCRYGG 1 cut(s) 105
CviAII CATG 2 cut(s) 48, 106
CviJI RGCY 3 cut(s) 5, 64, 104
CviKI_1 RGCY 3 cut(s) 5, 64, 104
DdeI CTNAG 2 cut(s) 99, 136
Eco130I CCWWGG 1 cut(s) 105
Eco81I CCTNAGG 1 cut(s) 99
EcoT14I CCWWGG 1 cut(s) 105
ErhI CCWWGG 1 cut(s) 105
FaeI CATG 2 cut(s) 51, 109
FaiI YATR 5 cut(s) 49, 107, 132, 175, 177
FatI CATG 2 cut(s) 47, 105
HaeIII GGCC 2 cut(s) 5, 104
Hin1II CATG 2 cut(s) 51, 109
HphI GGTGA 2 cut(s) 82, 94
HpyCH4V TGCA 2 cut(s) 35, 47
HpyF10VI GCNNNNNNNGC 1 cut(s) 53
HpyF3I CTNAG 2 cut(s) 99, 136
Hsp92II CATG 2 cut(s) 51, 109
LpnPI CCDG 1 cut(s) 42
MboII GAAGA 2 cut(s) 38, 97
MnlI CCTC 4 cut(s) 16, 72, 108, 145
MseI TTAA 1 cut(s) 181
MslI CAYNNNNRTG 1 cut(s) 110
MspA1I CMGCKG 1 cut(s) 41
MwoI GCNNNNNNNGC 1 cut(s) 53
NcoI CCATGG 1 cut(s) 105
NlaIII CATG 2 cut(s) 51, 109
RseI CAYNNNNRTG 1 cut(s) 110
SaqAI TTAA 1 cut(s) 181
SetI ASST 4 cut(s) 66, 100, 126, 137
SgeI CNNG 3 cut(s) 60, 69, 118
SmiMI CAYNNNNRTG 1 cut(s) 110
SsiI CCGC 1 cut(s) 41
StyI CCWWGG 1 cut(s) 105
Tru1I TTAA 1 cut(s) 181
Tru9I TTAA 1 cut(s) 181
TspDTI ATGAA 1 cut(s) 9
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.