Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr09

Orthogroup ID

OG0021845

Physical Location & Seq

Genomic Coordinates Forward (+)

36627377 .. 36631151

Gene Structure 3775 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD09G1287200.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1230 bp

ATGGCTTCCGTAAGCGTGGTTCCTGCTTCTGGTCTAAGAGAGCCCAGTGGAAATGCAGCTGGTGTTGATAATTTGCCTAATGAGATGAATGACATGAAAATTAGGGATGACAAGGAAATGGAGGCAACTGTTGTTAATGGTAATGGAACGGAGGCAGGTCATATTATTGTGACAACTATTGGTGGAAAGAATGGCCAGCCAAAACAGACAATCAGCTATATGGCTGAGCGTGTTGTTGGACATGGATCTTTCGGATTGGTTTTCCAGGCCAAGTGCTTAGAAACTGGTGAAACTGTTGCTATTAAAAAGGTTCTTCAAGACAAGAGGTACAAGAATCGGGAGTTGCAAACCATGCGTCTACTAGACCACCCAAACATTGTATCTCTTAGACATTGTTTCTTTTCAACTACTGAAAAAGATGAGCTATATCTTAATCTCGTACTTGAGTATGTCCCCGAGACTGCCCATCGGGTGATCAAGCACTATAGTAAGATGAACCAGAGGATGCCCCATATATACGTTAAACTTTATTTTTACCAGATTTGTAGAGCTCTTGCTTACATTCATAATACTATTGGAGTGTGCCACAGGGACATAAAGCCTCAAAATTTGTTGGTCAATCCACATACGCACCAGCTTAAAATCTGTGACTTTGGGAGTGCAAAAGTCTTGGTTAAAGGGGAACCCAACATATCTTACATCTGTTCTAGGTACTATCGAGCACCTGAACTTATATTTGGTGCAACCGAGTATACAACAGCCATTGACATCTGGTCCGCTGGCTGTGTTCTAGCTGAACTACTGCTTGGACAGCCCCTGTTTCCTGGAGAAAGTGGAGTAGACCAGCTTGTTGAAATAATCAAGGTTTTAGGTACCCCAACGAGGGAGGAAATAAAGTGCATGAACCCTAACTACACAGAGTTTAAGTTTCCCCAAATTAAAGCTCATCCGTGGCACAAGATATTCCACAAGCGGATGCCTCCGGAAGCTGTGGATCTCGTATCAAGGCTGCTTCAGTACTCTCCAAACCTTCGAAGTACAGCTTTGGAGGCCTTAGCTCATACCTTCTTTGACGAGTTGCGTGACCCTAACGCCCGCTTGCCAAATGGACGCTTCCTTCCCCCTTTGTTCAACTTTAAGGCTCATGAACTGAAGGGAGTACCCGCAGAAATGCTTGTTAAGCTGATCCCAGAGCACGCAAGAAAACAGTGCGCCTTCCTTGGGTCGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko01521 ko04012 ko04062 ko04110 ko04150 ko04151 ko04310 ko04340 ko04341 ko04360 ko04390 ko04510 ko04550 ko04657 ko04660 ko04662 ko04711 ko04722 ko04728 ko04910 ko04916 ko04917 ko04919 ko04931 ko04932 ko04934 ko05010 ko05160 ko05162 ko05164 ko05165 ko05166 ko05167 ko05169 ko05200 ko05210 ko05213 ko05215 ko05217 ko05224 ko05225 ko05226 map01521 map04012 map04062 map04110 map04150 map04151 map04310 map04340 map04341 map04360 map04390 map04510 map04550 map04657 map04660 map04662 map04711 map04722 map04728 map04910 map04916 map04917 map04919 map04931 map04932 map04934 map05010 map05160 map05162 map05164 map05165 map05166 map05167 map05169 map05200 map05210 map05213 map05215 map05217 map05224 map05225 map05226

Pfam Domains

Protein Families

Pkinase

Protein Analysis

410

Amino Acids

46.17

Weight (kDa)

8.7

Isoelectric Point (pI)

37.77

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pkinase	PF00069	74 - 357	2.2e-62	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	76 - 275	5.1e-25	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0021845)

Species	Orthologous Gene IDs
malus_domestica	MD09G1287200.v1.1 MD17G1279400.v1.1
prunus_persica	Prupe.3G006000_v2.0.a1 Prupe.3G006000_v2.0.a1

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	146
Acc65I	GGTACC	1 cut(s)	872
AccB1I	GGYRCC	1 cut(s)	872
AccI	GTMKAC	3 cut(s)	358, 752, 840
AccIII	TCCGGA	1 cut(s)	982
AciI	CCGC	4 cut(s)	777, 973, 1096, 1164
AclWI	GGATC	3 cut(s)	253, 1002, 1180
AcoI	YGGCCR	1 cut(s)	193
AcsI	RAATTY	1 cut(s)	607
AcuI	CTGAAG	2 cut(s)	998, 1172
AfaI	GTAC	7 cut(s)	329, 441, 713, 874, 1019, 1039, 1161
AfiI	CCNNNNNNNGG	4 cut(s)	29, 882, 883, 1221
AgsI	TTSAA	4 cut(s)	317, 405, 854, 1132
AhdI	GACNNNNNGTC	1 cut(s)	772
AjnI	CCWGG	2 cut(s)	264, 823
AjuI	GAANNNNNNNTTGG	4 cut(s)	720, 752, 789, 821
Alw21I	GWGCWC	3 cut(s)	553, 724, 1197
Alw26I	GTCTC	1 cut(s)	452
AlwI	GGATC	3 cut(s)	253, 1002, 1180
AlwNI	CAGNNNCTG	1 cut(s)	817
Ama87I	CYCGRG	1 cut(s)	455
Aor13HI	TCCGGA	1 cut(s)	982
AoxI	GGCC	3 cut(s)	193, 267, 1050
ApeKI	GCWGC	2 cut(s)	56, 1009
ApoI	RAATTY	1 cut(s)	607
ArsI	GACNNNNNNTTYG	2 cut(s)	340, 372
Asp718I	GGTACC	1 cut(s)	872
AspLEI	GCGC	1 cut(s)	1214
AspS9I	GGNCC	1 cut(s)	774
AsuHPI	GGTGA	2 cut(s)	299, 484
AsuII	TTCGAA	1 cut(s)	1033
AvaI	CYCGRG	1 cut(s)	455
AvaII	GGWCC	1 cut(s)	774
BalI	TGGCCA	1 cut(s)	195
BanI	GGYRCC	1 cut(s)	872
BanII	GRGCYC	2 cut(s)	45, 553
Bbv12I	GWGCWC	3 cut(s)	553, 724, 1197
BbvI	GCAGC	2 cut(s)	68, 996
BccI	CCATC	1 cut(s)	474
BciT130I	CCWGG	2 cut(s)	266, 825
BclI	TGATCA	1 cut(s)	474
BcoDI	GTCTC	1 cut(s)	452
BfaI	CTAG	3 cut(s)	362, 708, 791
BfmI	CTRYAG	1 cut(s)	484
BfuAI	ACCTGC	1 cut(s)	146
BisI	GCNGC	2 cut(s)	57, 1010
BlpI	GCTNAGC	1 cut(s)	225
BlsI	GCNGC	2 cut(s)	58, 1011
BmcAI	AGTACT	1 cut(s)	1019
Bme1390I	CCNGG	2 cut(s)	266, 825
Bme18I	GGWCC	1 cut(s)	774
BmeRI	GACNNNNNGTC	1 cut(s)	772
BmeT110I	CYCGRG	1 cut(s)	455
BmgT120I	GGNCC	1 cut(s)	774
BmiI	GGNNCC	3 cut(s)	21, 684, 874
BmrFI	CCNGG	2 cut(s)	266, 825
BmrI	ACTGGG	1 cut(s)	39
BmsI	GCATC	2 cut(s)	495, 966
BmuI	ACTGGG	1 cut(s)	39
BpmI	CTGGAG	1 cut(s)	846
Bpu10I	CCTNAGC	1 cut(s)	1054
Bpu1102I	GCTNAGC	1 cut(s)	225
Bpu14I	TTCGAA	1 cut(s)	1033
BpuEI	CTTGAG	1 cut(s)	464
BsaJI	CCNNGG	2 cut(s)	950, 1219
BsaWI	WCCGGW	1 cut(s)	982
Bsc4I	CCNNNNNNNGG	4 cut(s)	29, 882, 883, 1221
Bse1I	ACTGG	2 cut(s)	45, 289
BseAI	TCCGGA	1 cut(s)	982
BseBI	CCWGG	2 cut(s)	266, 825
BseDI	CCNNGG	2 cut(s)	950, 1219
BseGI	GGATG	4 cut(s)	112, 510, 946, 981
BseLI	CCNNNNNNNGG	4 cut(s)	29, 882, 883, 1221
BseMII	CTCAG	1 cut(s)	216
BseNI	ACTGG	2 cut(s)	45, 289
BseXI	GCAGC	2 cut(s)	68, 996
BshFI	GGCC	3 cut(s)	195, 269, 1052
BshNI	GGYRCC	1 cut(s)	872
BsiHKAI	GWGCWC	3 cut(s)	553, 724, 1197
BsiHKCI	CYCGRG	1 cut(s)	455
BsiSI	CCGG	1 cut(s)	983
BslFI	GGGAC	2 cut(s)	437, 605
BslI	CCNNNNNNNGG	4 cut(s)	29, 882, 883, 1221
BsmAI	GTCTC	1 cut(s)	452
BsmFI	GGGAC	2 cut(s)	437, 605
BsnI	GGCC	3 cut(s)	195, 269, 1052
BsoBI	CYCGRG	1 cut(s)	455
Bsp119I	TTCGAA	1 cut(s)	1033
Bsp1286I	GDGCHC	4 cut(s)	45, 553, 724, 1197
Bsp13I	TCCGGA	1 cut(s)	982
Bsp143I	GATC	4 cut(s)	245, 474, 994, 1185
Bsp1720I	GCTNAGC	1 cut(s)	225
BspACI	CCGC	4 cut(s)	777, 973, 1096, 1164
BspANI	GGCC	3 cut(s)	195, 269, 1052
BspCNI	CTCAG	1 cut(s)	217
BspEI	TCCGGA	1 cut(s)	982
BspHI	TCATGA	1 cut(s)	1144
BspLI	GGNNCC	3 cut(s)	21, 684, 874
BspMI	ACCTGC	1 cut(s)	146
BspPI	GGATC	3 cut(s)	253, 1002, 1180
BspT104I	TTCGAA	1 cut(s)	1033
BspT107I	GGYRCC	1 cut(s)	872
BsrI	ACTGG	2 cut(s)	45, 289
BssECI	CCNNGG	2 cut(s)	950, 1219
BssMI	GATC	4 cut(s)	245, 474, 994, 1185
BssNAI	GTATAC	1 cut(s)	753
BssT1I	CCWWGG	1 cut(s)	1219
Bst1107I	GTATAC	1 cut(s)	753
Bst2UI	CCWGG	2 cut(s)	266, 825
Bst4CI	ACNGT	3 cut(s)	130, 295, 1209
BstAPI	GCANNNNNTGC	1 cut(s)	352
BstBI	TTCGAA	1 cut(s)	1033
BstC8I	GCNNGC	5 cut(s)	197, 781, 1096, 1100, 1197
BstDEI	CTNAG	5 cut(s)	35, 225, 277, 386, 1054
BstDSI	CCRYGG	1 cut(s)	950
BstF5I	GGATG	4 cut(s)	112, 510, 946, 981
BstHHI	GCGC	1 cut(s)	1214
BstKTI	GATC	4 cut(s)	248, 477, 997, 1188
BstMAI	GTCTC	1 cut(s)	452
BstMBI	GATC	4 cut(s)	245, 474, 994, 1185
BstMWI	GCNNNNNNNGC	4 cut(s)	352, 811, 1049, 1180
BstNI	CCWGG	2 cut(s)	266, 825
BstSCI	CCNGG	2 cut(s)	264, 823
BstSFI	CTRYAG	1 cut(s)	484
BstV1I	GCAGC	2 cut(s)	68, 996
BstX2I	RGATCY	2 cut(s)	245, 994
BstYI	RGATCY	2 cut(s)	245, 994
BstZ17I	GTATAC	1 cut(s)	753
BsuRI	GGCC	3 cut(s)	195, 269, 1052
BtgI	CCRYGG	1 cut(s)	950
BtsCI	GGATG	4 cut(s)	112, 510, 946, 981
BtsIMutI	CAGTG	2 cut(s)	52, 1214
BveI	ACCTGC	1 cut(s)	146
Cac8I	GCNNGC	5 cut(s)	197, 781, 1096, 1100, 1197
CaiI	CAGNNNCTG	1 cut(s)	817
CciI	TCATGA	1 cut(s)	1144
CfoI	GCGC	1 cut(s)	1214
Cfr13I	GGNCC	1 cut(s)	774
CseI	GACGC	2 cut(s)	344, 1119
Csp6I	GTAC	7 cut(s)	328, 440, 712, 873, 1018, 1038, 1160
CviAII	CATG	5 cut(s)	94, 242, 352, 901, 1145
CviQI	GTAC	7 cut(s)	328, 440, 712, 873, 1018, 1038, 1160
DdeI	CTNAG	5 cut(s)	35, 225, 277, 386, 1054
DpnI	GATC	4 cut(s)	247, 476, 996, 1187
DpnII	GATC	4 cut(s)	245, 474, 994, 1185
DriI	GACNNNNNGTC	1 cut(s)	772
EaeI	YGGCCR	1 cut(s)	193
Eam1105I	GACNNNNNGTC	1 cut(s)	772
Ecl136II	GAGCTC	1 cut(s)	551
Eco130I	CCWWGG	1 cut(s)	1219
Eco147I	AGGCCT	1 cut(s)	1052
Eco24I	GRGCYC	2 cut(s)	45, 553
Eco47I	GGWCC	1 cut(s)	774
Eco53kI	GAGCTC	1 cut(s)	551
Eco57I	CTGAAG	2 cut(s)	998, 1172
Eco88I	CYCGRG	1 cut(s)	455
EcoICRI	GAGCTC	1 cut(s)	551
EcoRII	CCWGG	2 cut(s)	264, 823
EcoT14I	CCWWGG	1 cut(s)	1219
EcoT38I	GRGCYC	2 cut(s)	45, 553
ErhI	CCWWGG	1 cut(s)	1219
FaeI	CATG	5 cut(s)	97, 245, 355, 904, 1148
FalI	AAGNNNNNCTT	2 cut(s)	1027, 1059
FaqI	GGGAC	2 cut(s)	437, 605
FatI	CATG	5 cut(s)	93, 241, 351, 900, 1144
FauI	CCCGC	2 cut(s)	1103, 1171
FbaI	TGATCA	1 cut(s)	474
FblI	GTMKAC	3 cut(s)	358, 752, 840
Fnu4HI	GCNGC	2 cut(s)	57, 1010
FokI	GGATG	4 cut(s)	119, 517, 933, 988
FriOI	GRGCYC	2 cut(s)	45, 553
Fsp4HI	GCNGC	2 cut(s)	57, 1010
FspBI	CTAG	3 cut(s)	362, 708, 791
GlaI	GCGC	1 cut(s)	1213
GluI	GCNGC	2 cut(s)	57, 1010
GsuI	CTGGAG	1 cut(s)	846
HaeIII	GGCC	3 cut(s)	195, 269, 1052
HapII	CCGG	1 cut(s)	983
HgaI	GACGC	2 cut(s)	344, 1119
HhaI	GCGC	1 cut(s)	1214
Hin1II	CATG	5 cut(s)	97, 245, 355, 904, 1148
Hin6I	GCGC	1 cut(s)	1212
HinP1I	GCGC	1 cut(s)	1212
HinfI	GANTC	1 cut(s)	334
HpaII	CCGG	1 cut(s)	983
HphI	GGTGA	2 cut(s)	299, 484
Hpy166II	GTNNAC	3 cut(s)	359, 753, 841
Hpy188I	TCNGA	1 cut(s)	254
Hpy188III	TCNNGA	5 cut(s)	317, 338, 983, 1145, 1227
Hpy8I	GTNNAC	3 cut(s)	359, 753, 841
HpyAV	CCTTC	5 cut(s)	1040, 1075, 1127, 1147, 1225
HpyCH4III	ACNGT	3 cut(s)	130, 295, 1209
HpyCH4IV	ACGT	1 cut(s)	519
HpyCH4V	TGCA	5 cut(s)	56, 346, 662, 743, 900
HpyF10VI	GCNNNNNNNGC	4 cut(s)	352, 811, 1049, 1180
HpyF3I	CTNAG	5 cut(s)	35, 225, 277, 386, 1054
HpySE526I	ACGT	1 cut(s)	519
Hsp92II	CATG	5 cut(s)	97, 245, 355, 904, 1148
HspAI	GCGC	1 cut(s)	1212
Kpn2I	TCCGGA	1 cut(s)	982
KpnI	GGTACC	1 cut(s)	876
Ksp22I	TGATCA	1 cut(s)	474
Kzo9I	GATC	4 cut(s)	245, 474, 994, 1185
Lsp1109I	GCAGC	2 cut(s)	68, 996
LweI	GCATC	2 cut(s)	495, 966
MaeI	CTAG	3 cut(s)	362, 708, 791
MaeII	ACGT	1 cut(s)	519
MaeIII	GTNAC	3 cut(s)	169, 647, 1082
MalI	GATC	4 cut(s)	247, 476, 996, 1187
MboI	GATC	4 cut(s)	245, 474, 994, 1185
MboII	GAAGA	1 cut(s)	305
MflI	RGATCY	2 cut(s)	245, 994
MhlI	GDGCHC	4 cut(s)	45, 553, 724, 1197
MlsI	TGGCCA	1 cut(s)	195
MluCI	AATT	4 cut(s)	70, 99, 607, 936
MluNI	TGGCCA	1 cut(s)	195
MmeI	TCCRAC	1 cut(s)	217
MnlI	CCTC	9 cut(s)	115, 145, 318, 495, 612, 876, 880, 990, 1042
Mox20I	TGGCCA	1 cut(s)	195
MroI	TCCGGA	1 cut(s)	982
MscI	TGGCCA	1 cut(s)	195
Msp20I	TGGCCA	1 cut(s)	195
MspA1I	CMGCKG	2 cut(s)	59, 779
MspI	CCGG	1 cut(s)	983
MspR9I	CCNGG	2 cut(s)	266, 825
MvaI	CCWGG	2 cut(s)	266, 825
MwoI	GCNNNNNNNGC	4 cut(s)	352, 811, 1049, 1180
NdeII	GATC	4 cut(s)	245, 474, 994, 1185
NlaIII	CATG	5 cut(s)	97, 245, 355, 904, 1148
NlaIV	GGNNCC	3 cut(s)	21, 684, 874
NmuCI	GTSAC	3 cut(s)	169, 647, 1082
NspV	TTCGAA	1 cut(s)	1033
PagI	TCATGA	1 cut(s)	1144
PceI	AGGCCT	1 cut(s)	1052
PfeI	GAWTC	1 cut(s)	334
PfoI	TCCNGGA	1 cut(s)	823
PkrI	GCNGC	2 cut(s)	58, 1011
Psp124BI	GAGCTC	1 cut(s)	553
Psp6I	CCWGG	2 cut(s)	264, 823
PspGI	CCWGG	2 cut(s)	264, 823
PspN4I	GGNNCC	3 cut(s)	21, 684, 874
PspPI	GGNCC	1 cut(s)	774
PsrI	GAACNNNNNNTAC	3 cut(s)	35, 896, 928
PstNI	CAGNNNCTG	1 cut(s)	817
PsuI	RGATCY	2 cut(s)	245, 994
PvuII	CAGCTG	1 cut(s)	59
RsaI	GTAC	7 cut(s)	329, 441, 713, 874, 1019, 1039, 1161
RsaNI	GTAC	7 cut(s)	328, 440, 712, 873, 1018, 1038, 1160
SacI	GAGCTC	1 cut(s)	553
SatI	GCNGC	2 cut(s)	57, 1010
Sau3AI	GATC	4 cut(s)	245, 474, 994, 1185
Sau96I	GGNCC	1 cut(s)	774
ScaI	AGTACT	1 cut(s)	1019
ScrFI	CCNGG	2 cut(s)	266, 825
SduI	GDGCHC	4 cut(s)	45, 553, 724, 1197
SfaNI	GCATC	2 cut(s)	495, 966
SfcI	CTRYAG	1 cut(s)	484
SfuI	TTCGAA	1 cut(s)	1033
SinI	GGWCC	1 cut(s)	774
SmlI	CTYRAG	1 cut(s)	443
SmoI	CTYRAG	1 cut(s)	443
Sse9I	AATT	4 cut(s)	70, 99, 607, 936
SseBI	AGGCCT	1 cut(s)	1052
SsiI	CCGC	4 cut(s)	777, 973, 1096, 1164
SspMI	CTAG	3 cut(s)	362, 708, 791
SstI	GAGCTC	1 cut(s)	553
StuI	AGGCCT	1 cut(s)	1052
StyD4I	CCNGG	2 cut(s)	264, 823
StyI	CCWWGG	1 cut(s)	1219
TaaI	ACNGT	3 cut(s)	130, 295, 1209
TaiI	ACGT	1 cut(s)	522
TaqI	TCGA	2 cut(s)	718, 1033
TasI	AATT	4 cut(s)	70, 99, 607, 936
TatI	WGTACW	2 cut(s)	1017, 1037
TfiI	GAWTC	1 cut(s)	334
TscAI	CASTG	2 cut(s)	52, 1214
TseFI	GTSAC	3 cut(s)	169, 647, 1082
TseI	GCWGC	2 cut(s)	56, 1009
Tsp45I	GTSAC	3 cut(s)	169, 647, 1082
TspDTI	ATGAA	6 cut(s)	101, 110, 509, 554, 917, 1161
TspGWI	ACGGA	2 cut(s)	164, 939
TspRI	CASTG	2 cut(s)	52, 1214
VpaK11BI	GGWCC	1 cut(s)	774
XapI	RAATTY	1 cut(s)	607
XmiI	GTMKAC	3 cut(s)	358, 752, 840
XspI	CTAG	3 cut(s)	362, 708, 791
ZrmI	AGTACT	1 cut(s)	1019

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.