MD11G1085000.v1.1

Serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr11
Physical Location & Seq
Forward (+)
7173931 .. 7177233
3303 bp
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UTR
Exon/CDS
Intron
MD11G1085000.v1.1.491

Sequence Viewer

Length: 1482 bp
ATGGGAAACGTTTTCTGCCTTTGCTTCCGGCCGCACAGCACCATATCAAATTTCGATGACTCGTTAGAAGCAGAGAATGTGGGGAGAGACCAAGTCGACTCTCTGTCTCCGGTGCCGGGGTTCAGTGAGTTCAGCCTGCACCAGCTGAAAGCTGCCACGTCGCAGTTCTCGTCGGAGAAAGTTGTCTCCAAGCATGGCGAGAATGCTCCGAATGTGGTCTACAAAGGCAAGCTCCAAGACGGCCGCTGCATCGCCGTTAAGCGTTTCAGCCGCTCCGCTTGGCCCGATTCCCGCCAATTTCTGGAGAAAGCTAGAGCTGTGGGGCGGCTGAGGAACAAGCGTTTGGCGAATCTGATCGGATTCTGCTGTGAAGGGGATGAGAGATTGCTTGTGGCAGAGTTCATGCCTAATGATACTCTTTCCAAGCATCTTTTCCATTGCGAGAACCAGCCTATGAAATGGGCAATGAGGTTGCGAGTGGCTTTGTACACGGCAAAAGCTTTGGCCTACTGCAGCAGTAAAGGGCAGGCATCGTACCATGATCTTAATACTTGCAAAGTCCTGTTTGATCAGGAATTAAATCCCAGACTCTCCTGCTTTGGACTTATGAAGAATGTAAAAGATGGCGAGAGTTATAGTACCAACCTTGCTTTCAACCCTACCAAATACGCGAAGAAAGGAAAAGTGATACCAGAAGGTGTGGTTTACGGCTTTGGAACCCTATTGCTTGATCTGCTCAGCGGTAGACGTATCCCGCCAGCTCATGCGCTTGACCTCATACGCGATAAAAGTTTGTTGATGCTGTTGGACTCGTGCTTGGAAGGTCATGTTTCAAATGATGAAGGAACTGCGGTGGTGCAGTTAGCTTCACAATGCTTGCAGTCTGAACCTCAAAAGAGGCCGAATATCAATTCTCTTGTGACTTCCCTTGTCCCTCTTCAAAAAGAAATTGAGGTTCCGTCATATGTTTTGATGGGTACCCCCGATGGAAATGTGCCCCCAAAACCGATATTGCTGTCACCTCTAGCTGATGCTTGCACAAGATTGGATCTTACAGCAATACATGAGATATTGGTGAAAGCTAGATACGAGGACGATGAAACTGGGCACGAACTTTCTTTCGACATGTGGACAGAGCCAATGAAGGAGGCATTTGATTTTAGGAAGAGTGGTGATGCTGCATTCAAAGAGAAAGACTTTGCCATCGCGATAAGTTCTTACACAGAATACTTTGATCGTGTGAGTGGGAAATCGCCAACTATGTTGGTTAGACGGTGCCTGTGTTACTTAATGAGTAACAGGGCAGAAGAAGCTCTTCAAGATGGTGATGAGGCCCTAGCACTAAAGCGTGAATGGCCAACCGCCTTCTATCTTCAAGCGGCTGCCCTAAAGAGCCTAGGGATGGACAATGATGCCGAGGAAATTCTAAGCGTTGGCGCATCCTTGGAAGTTAAGAAACTAGATAAGCTGAGAAGTGAATAG

Protein Analysis

494

Amino Acids

54.97

Weight (kDa)

6.26

Isoelectric Point (pI)

43.47

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PK_Tyr_Ser-Thr PF07714 69 - 310 2.2e-20 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 69 - 307 6.1e-15 Protein kinase domain
TPR_BSK1_C PF25575 344 - 460 3.9e-48 Serine/threonine-protein kinase BSK1-like, TPR repeats
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0024341)

Species Orthologous Gene IDs
malus_domestica MD03G1080800.v1.1 MD11G1085000.v1.1
pyrus_communis pycom03g06450

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 977
AccB1I GGYRCC 3 cut(s) 112, 977, 1275
AccB7I CCANNNNNTGG 1 cut(s) 301
AccBSI CCGCTC 1 cut(s) 273
AccI GTMKAC 3 cut(s) 96, 219, 745
AccII CGCG 3 cut(s) 671, 783, 1208
AclI AACGTT 1 cut(s) 9
AclWI GGATC 1 cut(s) 1056
AcoI YGGCCR 3 cut(s) 29, 241, 1355
AcsI RAATTY 2 cut(s) 49, 1422
AfaI GTAC 4 cut(s) 488, 536, 640, 979
AfiI CCNNNNNNNGG 3 cut(s) 116, 301, 1402
AflIII ACRYGT 1 cut(s) 1125
AgsI TTSAA 6 cut(s) 655, 834, 941, 1186, 1319, 1376
AhdI GACNNNNNGTC 1 cut(s) 103
AjiI CACGTC 1 cut(s) 159
AjuI GAANNNNNNNTTGG 6 cut(s) 326, 358, 416, 448, 635, 667
Alw26I GTCTC 3 cut(s) 81, 111, 190
AlwI GGATC 1 cut(s) 1056
AoxI GGCC 7 cut(s) 29, 241, 281, 504, 899, 1332, 1355
ApeKI GCWGC 5 cut(s) 152, 246, 513, 1178, 1382
ApoI RAATTY 2 cut(s) 49, 1422
Asp700I GAANNNNTTC 1 cut(s) 1314
Asp718I GGTACC 1 cut(s) 977
AspA2I CCTAGG 1 cut(s) 1396
AspLEI GCGC 2 cut(s) 769, 1439
AspS9I GGNCC 2 cut(s) 282, 1333
AsuC2I CCSGG 1 cut(s) 117
AsuHPI GGTGA 4 cut(s) 1011, 1087, 1184, 1337
AvrII CCTAGG 1 cut(s) 1396
BaeGI GKGCMC 2 cut(s) 999, 1110
BalI TGGCCA 1 cut(s) 1357
BanI GGYRCC 3 cut(s) 112, 977, 1275
BauI CACGAG 1 cut(s) 811
BbvCI CCTCAGC 1 cut(s) 329
BbvI GCAGC 5 cut(s) 139, 233, 525, 1165, 1369
BccI CCATC 6 cut(s) 617, 967, 980, 1211, 1316, 1396
BceAI ACGGC 4 cut(s) 239, 256, 507, 724
BciVI GTATCC 1 cut(s) 761
BclI TGATCA 1 cut(s) 568
BcnI CCSGG 1 cut(s) 117
BcoDI GTCTC 3 cut(s) 81, 111, 190
BfaI CTAG 6 cut(s) 312, 1025, 1083, 1337, 1397, 1460
BfmI CTRYAG 1 cut(s) 511
BfuI GTATCC 1 cut(s) 761
BlnI CCTAGG 1 cut(s) 1396
BlpI GCTNAGC 1 cut(s) 737
Bme1390I CCNGG 1 cut(s) 117
BmeRI GACNNNNNGTC 1 cut(s) 103
BmgBI CACGTC 1 cut(s) 159
BmgT120I GGNCC 2 cut(s) 282, 1333
BmiI GGNNCC 5 cut(s) 114, 718, 957, 979, 1277
BmrFI CCNGG 1 cut(s) 117
BmrI ACTGGG 1 cut(s) 1113
BmsI GCATC 8 cut(s) 258, 436, 539, 789, 1021, 1165, 1402, 1448
BmuI ACTGGG 1 cut(s) 1113
BpmI CTGGAG 1 cut(s) 323
Bpu10I CCTNAGC 1 cut(s) 329
Bpu1102I GCTNAGC 1 cut(s) 737
BpuMI CCSGG 1 cut(s) 117
BsaI GGTCTC 1 cut(s) 81
BsaJI CCNNGG 4 cut(s) 116, 1396, 1416, 1443
BsaWI WCCGGW 1 cut(s) 109
Bsc4I CCNNNNNNNGG 3 cut(s) 116, 301, 1402
Bse1I ACTGG 1 cut(s) 1108
Bse3DI GCAATG 2 cut(s) 436, 471
BseDI CCNNGG 4 cut(s) 116, 1396, 1416, 1443
BseGI GGATG 3 cut(s) 382, 1407, 1439
BseLI CCNNNNNNNGG 3 cut(s) 116, 301, 1402
BseMI GCAATG 2 cut(s) 436, 471
BseMII CTCAG 3 cut(s) 320, 751, 1460
BseNI ACTGG 1 cut(s) 1108
BseSI GKGCMC 2 cut(s) 999, 1110
BseX3I CGGCCG 2 cut(s) 29, 241
BseXI GCAGC 5 cut(s) 139, 233, 525, 1165, 1369
BsgI GTGCAG 2 cut(s) 122, 878
Bsh1236I CGCG 3 cut(s) 671, 783, 1208
Bsh1285I CGRYCG 2 cut(s) 32, 244
BshFI GGCC 7 cut(s) 31, 243, 283, 506, 901, 1334, 1357
BshNI GGYRCC 3 cut(s) 112, 977, 1275
BsiEI CGRYCG 2 cut(s) 32, 244
BsiSI CCGG 3 cut(s) 28, 110, 116
BslFI GGGAC 1 cut(s) 917
BslI CCNNNNNNNGG 3 cut(s) 116, 301, 1402
BsmAI GTCTC 3 cut(s) 81, 111, 190
BsmFI GGGAC 1 cut(s) 917
BsmI GAATGC 2 cut(s) 208, 1181
BsnI GGCC 7 cut(s) 31, 243, 283, 506, 901, 1334, 1357
Bso31I GGTCTC 1 cut(s) 81
Bsp1286I GDGCHC 2 cut(s) 999, 1110
Bsp1407I TGTACA 1 cut(s) 486
Bsp143I GATC 6 cut(s) 354, 541, 568, 730, 1048, 1234
Bsp1720I GCTNAGC 1 cut(s) 737
Bsp68I TCGCGA 1 cut(s) 1208
BspANI GGCC 7 cut(s) 31, 243, 283, 506, 901, 1334, 1357
BspCNI CTCAG 3 cut(s) 321, 750, 1461
BspFNI CGCG 3 cut(s) 671, 783, 1208
BspLI GGNNCC 5 cut(s) 114, 718, 957, 979, 1277
BspMAI CTGCAG 1 cut(s) 515
BspPI GGATC 1 cut(s) 1056
BspQI GCTCTTC 1 cut(s) 1320
BspT107I GGYRCC 3 cut(s) 112, 977, 1275
BspTNI GGTCTC 1 cut(s) 81
BsrBI CCGCTC 1 cut(s) 273
BsrDI GCAATG 2 cut(s) 436, 471
BsrGI TGTACA 1 cut(s) 486
BsrI ACTGG 1 cut(s) 1108
BssECI CCNNGG 4 cut(s) 116, 1396, 1416, 1443
BssMI GATC 6 cut(s) 354, 541, 568, 730, 1048, 1234
BssSI CACGAG 1 cut(s) 811
BssT1I CCWWGG 2 cut(s) 1396, 1443
Bst2BI CACGAG 1 cut(s) 811
Bst4CI ACNGT 1 cut(s) 1275
Bst6I CTCTTC 3 cut(s) 942, 1160, 1320
BstAUI TGTACA 1 cut(s) 486
BstC8I GCNNGC 6 cut(s) 137, 230, 528, 759, 878, 1036
BstDEI CTNAG 4 cut(s) 329, 737, 1427, 1469
BstF5I GGATG 3 cut(s) 382, 1407, 1439
BstFNI CGCG 3 cut(s) 671, 783, 1208
BstHHI GCGC 2 cut(s) 769, 1439
BstKTI GATC 6 cut(s) 357, 544, 571, 733, 1051, 1237
BstMAI GTCTC 3 cut(s) 81, 111, 190
BstMBI GATC 6 cut(s) 354, 541, 568, 730, 1048, 1234
BstMCI CGRYCG 2 cut(s) 32, 244
BstMWI GCNNNNNNNGC 3 cut(s) 733, 1310, 1354
BstNSI RCATGY 1 cut(s) 1129
BstSCI CCNGG 1 cut(s) 115
BstSFI CTRYAG 1 cut(s) 511
BstSLI GKGCMC 2 cut(s) 999, 1110
BstUI CGCG 3 cut(s) 671, 783, 1208
BstV1I GCAGC 5 cut(s) 139, 233, 525, 1165, 1369
BstX2I RGATCY 1 cut(s) 1048
BstYI RGATCY 1 cut(s) 1048
BstZI CGGCCG 2 cut(s) 29, 241
BsuI GTATCC 1 cut(s) 761
BsuRI GGCC 7 cut(s) 31, 243, 283, 506, 901, 1334, 1357
BtgZI GCGATG 2 cut(s) 235, 1189
BtrI CACGTC 1 cut(s) 159
BtsCI GGATG 3 cut(s) 382, 1407, 1439
BtsIMutI CAGTG 1 cut(s) 130
BtuMI TCGCGA 1 cut(s) 1208
Cac8I GCNNGC 6 cut(s) 137, 230, 528, 759, 878, 1036
CfoI GCGC 2 cut(s) 769, 1439
Cfr13I GGNCC 2 cut(s) 282, 1333
Csp6I GTAC 4 cut(s) 487, 535, 639, 978
CviAII CATG 7 cut(s) 194, 403, 539, 764, 827, 1064, 1126
CviQI GTAC 4 cut(s) 487, 535, 639, 978
DdeI CTNAG 4 cut(s) 329, 737, 1427, 1469
DpnI GATC 6 cut(s) 356, 543, 570, 732, 1050, 1236
DpnII GATC 6 cut(s) 354, 541, 568, 730, 1048, 1234
DriI GACNNNNNGTC 1 cut(s) 103
EaeI YGGCCR 3 cut(s) 29, 241, 1355
EagI CGGCCG 2 cut(s) 29, 241
Eam1104I CTCTTC 3 cut(s) 942, 1160, 1320
Eam1105I GACNNNNNGTC 1 cut(s) 103
EarI CTCTTC 3 cut(s) 942, 1160, 1320
EclXI CGGCCG 2 cut(s) 29, 241
Eco130I CCWWGG 2 cut(s) 1396, 1443
Eco31I GGTCTC 1 cut(s) 81
Eco52I CGGCCG 2 cut(s) 29, 241
EcoO109I RGGNCCY 1 cut(s) 1333
EcoT14I CCWWGG 2 cut(s) 1396, 1443
ErhI CCWWGG 2 cut(s) 1396, 1443
FaeI CATG 7 cut(s) 197, 406, 542, 767, 830, 1067, 1129
FalI AAGNNNNNCTT 2 cut(s) 1299, 1331
FaqI GGGAC 1 cut(s) 917
FatI CATG 7 cut(s) 193, 402, 538, 763, 826, 1063, 1125
FauI CCCGC 2 cut(s) 299, 762
FauNDI CATATG 1 cut(s) 964
FbaI TGATCA 1 cut(s) 568
FblI GTMKAC 3 cut(s) 96, 219, 745
FokI GGATG 3 cut(s) 389, 1414, 1426
FspBI CTAG 6 cut(s) 312, 1025, 1083, 1337, 1397, 1460
GlaI GCGC 2 cut(s) 768, 1438
GsuI CTGGAG 1 cut(s) 323
HaeIII GGCC 7 cut(s) 31, 243, 283, 506, 901, 1334, 1357
HapII CCGG 3 cut(s) 28, 110, 116
HhaI GCGC 2 cut(s) 769, 1439
Hin1II CATG 7 cut(s) 197, 406, 542, 767, 830, 1067, 1129
Hin6I GCGC 2 cut(s) 767, 1437
HinP1I GCGC 2 cut(s) 767, 1437
HincII GTYRAC 1 cut(s) 97
HindII GTYRAC 1 cut(s) 97
HindIII AAGCTT 1 cut(s) 498
HinfI GANTC 7 cut(s) 59, 98, 287, 349, 360, 588, 809
HpaII CCGG 3 cut(s) 28, 110, 116
HphI GGTGA 4 cut(s) 1011, 1087, 1184, 1337
Hpy166II GTNNAC 6 cut(s) 97, 220, 489, 706, 746, 1131
Hpy188I TCNGA 5 cut(s) 175, 210, 354, 359, 886
Hpy188III TCNNGA 4 cut(s) 302, 572, 1207, 1319
Hpy8I GTNNAC 6 cut(s) 97, 220, 489, 706, 746, 1131
Hpy99I CGWCG 2 cut(s) 163, 175
HpyAV CCTTC 6 cut(s) 365, 689, 815, 836, 1138, 1375
HpyCH4III ACNGT 1 cut(s) 1275
HpyCH4IV ACGT 3 cut(s) 9, 158, 748
HpyCH4V TGCA 8 cut(s) 139, 249, 513, 555, 859, 880, 1038, 1181
HpyF10VI GCNNNNNNNGC 3 cut(s) 733, 1310, 1354
HpyF3I CTNAG 4 cut(s) 329, 737, 1427, 1469
HpySE526I ACGT 3 cut(s) 9, 158, 748
Hsp92II CATG 7 cut(s) 197, 406, 542, 767, 830, 1067, 1129
HspAI GCGC 2 cut(s) 767, 1437
KpnI GGTACC 1 cut(s) 981
Ksp22I TGATCA 1 cut(s) 568
Kzo9I GATC 6 cut(s) 354, 541, 568, 730, 1048, 1234
LguI GCTCTTC 1 cut(s) 1320
LmnI GCTCC 3 cut(s) 211, 237, 278
Lsp1109I GCAGC 5 cut(s) 139, 233, 525, 1165, 1369
LweI GCATC 8 cut(s) 258, 436, 539, 789, 1021, 1165, 1402, 1448
MaeI CTAG 6 cut(s) 312, 1025, 1083, 1337, 1397, 1460
MaeII ACGT 3 cut(s) 9, 158, 748
MaeIII GTNAC 4 cut(s) 919, 1017, 1283, 1295
MalI GATC 6 cut(s) 356, 543, 570, 732, 1050, 1236
MbiI CCGCTC 1 cut(s) 273
MboI GATC 6 cut(s) 354, 541, 568, 730, 1048, 1234
MboII GAAGA 7 cut(s) 622, 685, 929, 1177, 1307, 1319, 1364
MflI RGATCY 1 cut(s) 1048
MhlI GDGCHC 2 cut(s) 999, 1110
MlsI TGGCCA 1 cut(s) 1357
MluCI AATT 6 cut(s) 49, 296, 575, 910, 948, 1422
MluNI TGGCCA 1 cut(s) 1357
MlyI GAGTC 4 cut(s) 53, 92, 582, 803
MmeI TCCRAC 2 cut(s) 153, 786
Mox20I TGGCCA 1 cut(s) 1357
MroXI GAANNNNTTC 1 cut(s) 1314
MscI TGGCCA 1 cut(s) 1357
MseI TTAA 5 cut(s) 258, 546, 578, 1289, 1452
Msp20I TGGCCA 1 cut(s) 1357
MspA1I CMGCKG 3 cut(s) 145, 246, 741
MspI CCGG 3 cut(s) 28, 110, 116
MspR9I CCNGG 1 cut(s) 117
Mva1269I GAATGC 2 cut(s) 208, 1181
MvnI CGCG 3 cut(s) 671, 783, 1208
MwoI GCNNNNNNNGC 3 cut(s) 733, 1310, 1354
NciI CCSGG 1 cut(s) 117
NdeI CATATG 1 cut(s) 964
NdeII GATC 6 cut(s) 354, 541, 568, 730, 1048, 1234
NlaIII CATG 7 cut(s) 197, 406, 542, 767, 830, 1067, 1129
NlaIV GGNNCC 5 cut(s) 114, 718, 957, 979, 1277
NmeAIII GCCGAG 1 cut(s) 1441
NmuCI GTSAC 2 cut(s) 919, 1017
NruI TCGCGA 1 cut(s) 1208
NspI RCATGY 1 cut(s) 1129
PciI ACATGT 1 cut(s) 1125
PciSI GCTCTTC 1 cut(s) 1320
PcsI WCGNNNNNNNCGW 1 cut(s) 167
PctI GAATGC 2 cut(s) 208, 1181
PdmI GAANNNNTTC 1 cut(s) 1314
PfeI GAWTC 3 cut(s) 287, 349, 360
PflFI GACNNNGTC 1 cut(s) 92
PflMI CCANNNNNTGG 1 cut(s) 301
PleI GAGTC 4 cut(s) 53, 92, 582, 803
PpsI GAGTC 4 cut(s) 53, 92, 582, 803
PscI ACATGT 1 cut(s) 1125
Psp1406I AACGTT 1 cut(s) 9
PspN4I GGNNCC 5 cut(s) 114, 718, 957, 979, 1277
PspPI GGNCC 2 cut(s) 282, 1333
PstI CTGCAG 1 cut(s) 515
PsuI RGATCY 1 cut(s) 1048
PsyI GACNNNGTC 1 cut(s) 92
PvuII CAGCTG 1 cut(s) 145
RruI TCGCGA 1 cut(s) 1208
RsaI GTAC 4 cut(s) 488, 536, 640, 979
RsaNI GTAC 4 cut(s) 487, 535, 639, 978
SalI GTCGAC 1 cut(s) 95
SapI GCTCTTC 1 cut(s) 1320
SaqAI TTAA 5 cut(s) 258, 546, 578, 1289, 1452
Sau3AI GATC 6 cut(s) 354, 541, 568, 730, 1048, 1234
Sau96I GGNCC 2 cut(s) 282, 1333
SchI GAGTC 4 cut(s) 53, 92, 582, 803
ScrFI CCNGG 1 cut(s) 117
SduI GDGCHC 2 cut(s) 999, 1110
SfaNI GCATC 8 cut(s) 258, 436, 539, 789, 1021, 1165, 1402, 1448
SfcI CTRYAG 1 cut(s) 511
Sse9I AATT 6 cut(s) 49, 296, 575, 910, 948, 1422
SspMI CTAG 6 cut(s) 312, 1025, 1083, 1337, 1397, 1460
StyD4I CCNGG 1 cut(s) 115
StyI CCWWGG 2 cut(s) 1396, 1443
TaaI ACNGT 1 cut(s) 1275
TaiI ACGT 3 cut(s) 12, 161, 751
TaqI TCGA 3 cut(s) 54, 96, 1122
TasI AATT 6 cut(s) 49, 296, 575, 910, 948, 1422
TatI WGTACW 1 cut(s) 486
TauI GCSGC 5 cut(s) 34, 246, 273, 328, 1382
TfiI GAWTC 3 cut(s) 287, 349, 360
Tru1I TTAA 5 cut(s) 258, 546, 578, 1289, 1452
Tru9I TTAA 5 cut(s) 258, 546, 578, 1289, 1452
TscAI CASTG 1 cut(s) 130
TseFI GTSAC 2 cut(s) 919, 1017
TseI GCWGC 5 cut(s) 152, 246, 513, 1178, 1382
Tsp45I GTSAC 2 cut(s) 919, 1017
TspDTI ATGAA 6 cut(s) 391, 470, 623, 855, 1113, 1157
TspGWI ACGGA 1 cut(s) 948
TspRI CASTG 1 cut(s) 130
Tth111I GACNNNGTC 1 cut(s) 92
Van91I CCANNNNNTGG 1 cut(s) 301
XapI RAATTY 2 cut(s) 49, 1422
XceI RCATGY 1 cut(s) 1129
XmaJI CCTAGG 1 cut(s) 1396
XmiI GTMKAC 3 cut(s) 96, 219, 745
XmnI GAANNNNTTC 1 cut(s) 1314
XspI CTAG 6 cut(s) 312, 1025, 1083, 1337, 1397, 1460
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.