pycom03g06450

Serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr3
Physical Location & Seq
Reverse (-)
5037599 .. 5040677
3079 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom03g06450.4

Sequence Viewer

Length: 1476 bp
ATGGGAAACGGTTTCTGCCTTTGCTTCCGGCCGTGCAACACCATATCGAATATCGAAGACTCGTTAGACGCAGAGAATAGGGGCAGGGACAAAATGGACTCTCCGTCTCTGGTGCCGGGGTTCAGTGAGTTCAGCCTGCAGCAACTGAAAGCTGCCACATCGCAGTTCTCGTCGGAGAACGTTGTCTCCAAGCACGGCGAGGATGCTCCTAATGTGGTCTACAAAGGCAAGCTCCAAGACGGCCGTTGCATCGCTGTTAAGCGCTTCAGCTGCTCCGCTTGGCCTGATTCCCGCCAATTTCTGGAGAACGCTAGAGCTGTGGGGCGTCTGAGGAACGAGCGTTTGGCGAATCTGATCGGGTGCTGCTGTGAGCGCGATCAGAGATTGCTTGTGGCAGAATTTATGCCTAATGAAACTCTCTCCAAGCATCTTTTCCATTGTGAGAACCAGCCTATGAAATGGGCAATGAGGATGCGAGCGGCGTTGTACACGGCACAAGCTTTGGCCTATTGCAGCAGTAAAGGGCAGGCGTCGTTCCAAGATCTTAATACTTGCAAAGTCCTGTTTGATCAGGATTGGAATCCCAGACTCTCCTGCTTTGGATTCATGGAGAATAGCAAAGATGGCAAGAGCTATAGTACCAACCTCGCTTTCAGCCCTCCTGAATACACAAATAAAGGAAAAGTGATACCGGAAAGCGTGGTTTACGGCTTTGGAACCCTGTTGCTTGATCTGCTCAGCGGTAGACGTATCCCACCAGCCCATGCGCTTGAACTCATAAGCGATAAAAATTTGTCGCTGCTGTTGGACTCATGCTTAGAAGGCCATGTCTCGAATGATGATGGAACTGCACTGGTGCAGTTAGCTTCACAATGCTTGCAGTCTGAACCTCGTAAGAGGCCGAATGTCATGTCTCTTATGGCTGCCCTCGTACCTCTTCAAAAAGAAACTGAGGTTCCTTCATATGTTTTGAGGGGTATCCCCCATGGGAATGTGCCTCCAAAGTCGCCGACATTTCTATCACCTCTAGCTGATGCTTGCAGAAGATTGGATCTAACTGCAATACATGAAATATTGGCGAAAGTTAGATACGTGGATGATGAAACTAGGCACGAACTTTCTTTCGATATGTGGACAGAGCCAATGAAGGAGGCAATAGATTTTAGGCAGAAGGGGGATGCTGCATTCAAAGAGAAAAATGTTGCCATCGCAATAAGTTCTTACACAGAATACATTGGTCGTGTGACCGTGAAATCGCCAACTATGCTGGTTAGACGGAGCTTGTGTTACTTGATGAGTAGCAAGGCAGAAGAAGCTCTTCGAGATGGCCAGGAAGCCCTAGCAGAAAAGCGTGAGTGGCCAACTGCCTTCTATCTTCAAGCAGCAGCCCTAAAGAGCCTCGGGATGGACAATGACGCGGAGGAAATTCTAAACGTTGGCATATCCTTGGAAGTCAAGAAACTGGATATAAGCTGA

Protein Analysis

492

Amino Acids

54.81

Weight (kDa)

6.3

Isoelectric Point (pI)

47.26

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0024341)

Species Orthologous Gene IDs
malus_domestica MD03G1080800.v1.1 MD11G1085000.v1.1
pyrus_communis pycom03g06450

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 112
AccB7I CCANNNNNTGG 1 cut(s) 301
AccBSI CCGCTC 1 cut(s) 479
AccI GTMKAC 2 cut(s) 219, 745
AccII CGCG 2 cut(s) 375, 1418
AciI CCGC 5 cut(s) 276, 292, 479, 741, 1418
AclI AACGTT 2 cut(s) 180, 1434
AclWI GGATC 1 cut(s) 1059
AcoI YGGCCR 4 cut(s) 29, 241, 1327, 1358
AcsI RAATTY 3 cut(s) 398, 790, 1425
AcuI CTGAAG 1 cut(s) 250
AcyI GRCGYC 2 cut(s) 325, 530
AfaI GTAC 3 cut(s) 488, 640, 933
AfeI AGCGCT 1 cut(s) 263
AfiI CCNNNNNNNGG 2 cut(s) 301, 1405
AgsI TTSAA 4 cut(s) 773, 941, 1189, 1379
AhdI GACNNNNNGTC 1 cut(s) 103
AjnI CCWGG 1 cut(s) 1329
AjuI GAANNNNNNNTTGG 6 cut(s) 326, 358, 416, 448, 635, 667
AloI GAACNNNNNNTCC 2 cut(s) 170, 202
Alw26I GTCTC 4 cut(s) 111, 190, 835, 918
AlwI GGATC 1 cut(s) 1059
AlwNI CAGNNNCTG 1 cut(s) 145
Ama87I CYCGRG 1 cut(s) 1400
Aor51HI AGCGCT 1 cut(s) 263
AoxI GGCC 8 cut(s) 29, 241, 281, 504, 823, 899, 1327, 1358
ApoI RAATTY 3 cut(s) 398, 790, 1425
ArsI GACNNNNNNTTYG 2 cut(s) 896, 928
Asp700I GAANNNNTTC 1 cut(s) 1317
AspLEI GCGC 3 cut(s) 264, 375, 769
AsuC2I CCSGG 1 cut(s) 117
AsuHPI GGTGA 1 cut(s) 1014
AvaI CYCGRG 1 cut(s) 1400
BalI TGGCCA 2 cut(s) 1329, 1360
BanI GGYRCC 1 cut(s) 112
BbsI GAAGAC 1 cut(s) 63
BccI CCATC 5 cut(s) 617, 836, 1214, 1319, 1399
BceAI ACGGC 6 cut(s) 16, 211, 228, 256, 507, 724
BciT130I CCWGG 1 cut(s) 1331
BciVI GTATCC 2 cut(s) 761, 989
BclI TGATCA 1 cut(s) 568
BcnI CCSGG 1 cut(s) 117
BcoDI GTCTC 4 cut(s) 111, 190, 835, 918
BfaI CTAG 4 cut(s) 312, 1028, 1107, 1340
BfmI CTRYAG 2 cut(s) 137, 634
BfoI RGCGCY 1 cut(s) 265
BfuI GTATCC 2 cut(s) 761, 989
BglII AGATCT 1 cut(s) 541
BlpI GCTNAGC 1 cut(s) 737
Bme1390I CCNGG 2 cut(s) 117, 1331
BmeRI GACNNNNNGTC 1 cut(s) 103
BmeT110I CYCGRG 1 cut(s) 1400
BmiI GGNNCC 3 cut(s) 114, 718, 957
BmrFI CCNGG 2 cut(s) 117, 1331
BmsI GCATC 6 cut(s) 193, 258, 436, 462, 1024, 1168
BpiI GAAGAC 1 cut(s) 63
BpmI CTGGAG 1 cut(s) 323
Bpu1102I GCTNAGC 1 cut(s) 737
BpuMI CCSGG 1 cut(s) 117
BsaAI YACGTR 1 cut(s) 1093
BsaBI GATNNNNATC 1 cut(s) 579
BsaHI GRCGYC 2 cut(s) 325, 530
BsaJI CCNNGG 4 cut(s) 116, 985, 1399, 1446
BsaWI WCCGGW 1 cut(s) 691
BsaXI ACNNNNNCTCC 4 cut(s) 170, 200, 1270, 1300
Bsc4I CCNNNNNNNGG 2 cut(s) 301, 1405
Bse1I ACTGG 2 cut(s) 858, 1467
Bse3DI GCAATG 1 cut(s) 471
Bse8I GATNNNNATC 1 cut(s) 579
BseBI CCWGG 1 cut(s) 1331
BseDI CCNNGG 4 cut(s) 116, 985, 1399, 1446
BseGI GGATG 5 cut(s) 208, 477, 1102, 1183, 1410
BseJI GATNNNNATC 1 cut(s) 579
BseLI CCNNNNNNNGG 2 cut(s) 301, 1405
BseMI GCAATG 1 cut(s) 471
BseMII CTCAG 3 cut(s) 320, 751, 942
BseNI ACTGG 2 cut(s) 858, 1467
BseX3I CGGCCG 2 cut(s) 29, 241
BsgI GTGCAG 2 cut(s) 834, 878
Bsh1236I CGCG 2 cut(s) 375, 1418
Bsh1285I CGRYCG 2 cut(s) 32, 244
BshFI GGCC 8 cut(s) 31, 243, 283, 506, 825, 901, 1329, 1360
BshNI GGYRCC 1 cut(s) 112
BsiEI CGRYCG 2 cut(s) 32, 244
BsiHKCI CYCGRG 1 cut(s) 1400
BsiSI CCGG 3 cut(s) 28, 116, 692
BslFI GGGAC 1 cut(s) 101
BslI CCNNNNNNNGG 2 cut(s) 301, 1405
BsmAI GTCTC 4 cut(s) 111, 190, 835, 918
BsmBI CGTCTC 1 cut(s) 111
BsmFI GGGAC 1 cut(s) 101
BsmI GAATGC 1 cut(s) 1184
BsnI GGCC 8 cut(s) 31, 243, 283, 506, 825, 901, 1329, 1360
BsoBI CYCGRG 1 cut(s) 1400
Bsp1407I TGTACA 1 cut(s) 486
Bsp143I GATC 6 cut(s) 354, 376, 541, 568, 730, 1051
Bsp1720I GCTNAGC 1 cut(s) 737
Bsp19I CCATGG 1 cut(s) 985
BspACI CCGC 5 cut(s) 276, 292, 479, 741, 1418
BspANI GGCC 8 cut(s) 31, 243, 283, 506, 825, 901, 1329, 1360
BspCNI CTCAG 3 cut(s) 321, 750, 943
BspFNI CGCG 2 cut(s) 375, 1418
BspLI GGNNCC 3 cut(s) 114, 718, 957
BspMAI CTGCAG 1 cut(s) 141
BspPI GGATC 1 cut(s) 1059
BspQI GCTCTTC 1 cut(s) 1323
BspT107I GGYRCC 1 cut(s) 112
BsrBI CCGCTC 1 cut(s) 479
BsrDI GCAATG 1 cut(s) 471
BsrGI TGTACA 1 cut(s) 486
BsrI ACTGG 2 cut(s) 858, 1467
BssECI CCNNGG 4 cut(s) 116, 985, 1399, 1446
BssMI GATC 6 cut(s) 354, 376, 541, 568, 730, 1051
BssNI GRCGYC 2 cut(s) 325, 530
BssT1I CCWWGG 2 cut(s) 985, 1446
Bst2UI CCWGG 1 cut(s) 1331
Bst4CI ACNGT 2 cut(s) 11, 1249
Bst6I CTCTTC 2 cut(s) 942, 1323
BstACI GRCGYC 2 cut(s) 325, 530
BstAUI TGTACA 1 cut(s) 486
BstBAI YACGTR 1 cut(s) 1093
BstC8I GCNNGC 6 cut(s) 137, 230, 477, 528, 878, 1039
BstDEI CTNAG 4 cut(s) 329, 737, 817, 951
BstDSI CCRYGG 1 cut(s) 985
BstF5I GGATG 5 cut(s) 208, 477, 1102, 1183, 1410
BstFNI CGCG 2 cut(s) 375, 1418
BstH2I RGCGCY 1 cut(s) 265
BstHHI GCGC 3 cut(s) 264, 375, 769
BstKTI GATC 6 cut(s) 357, 379, 544, 571, 733, 1054
BstMAI GTCTC 4 cut(s) 111, 190, 835, 918
BstMBI GATC 6 cut(s) 354, 376, 541, 568, 730, 1051
BstMCI CGRYCG 2 cut(s) 32, 244
BstMWI GCNNNNNNNGC 8 cut(s) 270, 372, 624, 733, 822, 1264, 1313, 1357
BstNI CCWGG 1 cut(s) 1331
BstSCI CCNGG 2 cut(s) 115, 1329
BstSFI CTRYAG 2 cut(s) 137, 634
BstUI CGCG 2 cut(s) 375, 1418
BstV2I GAAGAC 1 cut(s) 63
BstX2I RGATCY 2 cut(s) 541, 1051
BstYI RGATCY 2 cut(s) 541, 1051
BstZI CGGCCG 2 cut(s) 29, 241
BsuI GTATCC 2 cut(s) 761, 989
BsuRI GGCC 8 cut(s) 31, 243, 283, 506, 825, 901, 1329, 1360
BtgI CCRYGG 1 cut(s) 985
BtgZI GCGATG 3 cut(s) 144, 235, 1192
BtsCI GGATG 5 cut(s) 208, 477, 1102, 1183, 1410
BtsIMutI CAGTG 2 cut(s) 130, 851
Cac8I GCNNGC 6 cut(s) 137, 230, 477, 528, 878, 1039
CaiI CAGNNNCTG 1 cut(s) 145
CfoI GCGC 3 cut(s) 264, 375, 769
CseI GACGC 4 cut(s) 77, 314, 519, 1424
Csp6I GTAC 3 cut(s) 487, 639, 932
CviAII CATG 7 cut(s) 607, 764, 813, 827, 910, 986, 1067
CviQI GTAC 3 cut(s) 487, 639, 932
DdeI CTNAG 4 cut(s) 329, 737, 817, 951
DpnI GATC 6 cut(s) 356, 378, 543, 570, 732, 1053
DpnII GATC 6 cut(s) 354, 376, 541, 568, 730, 1051
DriI GACNNNNNGTC 1 cut(s) 103
EaeI YGGCCR 4 cut(s) 29, 241, 1327, 1358
EagI CGGCCG 2 cut(s) 29, 241
Eam1104I CTCTTC 2 cut(s) 942, 1323
Eam1105I GACNNNNNGTC 1 cut(s) 103
EarI CTCTTC 2 cut(s) 942, 1323
EclXI CGGCCG 2 cut(s) 29, 241
Eco130I CCWWGG 2 cut(s) 985, 1446
Eco47III AGCGCT 1 cut(s) 263
Eco52I CGGCCG 2 cut(s) 29, 241
Eco57I CTGAAG 1 cut(s) 250
Eco88I CYCGRG 1 cut(s) 1400
EcoRII CCWGG 1 cut(s) 1329
EcoT14I CCWWGG 2 cut(s) 985, 1446
ErhI CCWWGG 2 cut(s) 985, 1446
Esp3I CGTCTC 1 cut(s) 111
FaeI CATG 7 cut(s) 610, 767, 816, 830, 913, 989, 1070
FalI AAGNNNNNCTT 2 cut(s) 1302, 1334
FaqI GGGAC 1 cut(s) 101
FatI CATG 7 cut(s) 606, 763, 812, 826, 909, 985, 1066
FauI CCCGC 1 cut(s) 299
FauNDI CATATG 1 cut(s) 964
FbaI TGATCA 1 cut(s) 568
FblI GTMKAC 2 cut(s) 219, 745
FokI GGATG 5 cut(s) 215, 484, 1109, 1190, 1417
FspBI CTAG 4 cut(s) 312, 1028, 1107, 1340
GlaI GCGC 3 cut(s) 263, 374, 768
GsuI CTGGAG 1 cut(s) 323
HaeII RGCGCY 1 cut(s) 265
HaeIII GGCC 8 cut(s) 31, 243, 283, 506, 825, 901, 1329, 1360
HapII CCGG 3 cut(s) 28, 116, 692
HgaI GACGC 4 cut(s) 77, 314, 519, 1424
HhaI GCGC 3 cut(s) 264, 375, 769
Hin1I GRCGYC 2 cut(s) 325, 530
Hin1II CATG 7 cut(s) 610, 767, 816, 830, 913, 989, 1070
Hin6I GCGC 3 cut(s) 262, 373, 767
HinP1I GCGC 3 cut(s) 262, 373, 767
HindIII AAGCTT 1 cut(s) 498
HinfI GANTC 8 cut(s) 59, 98, 287, 349, 580, 588, 603, 809
HpaII CCGG 3 cut(s) 28, 116, 692
HphI GGTGA 1 cut(s) 1014
Hpy166II GTNNAC 5 cut(s) 220, 489, 706, 746, 1134
Hpy188I TCNGA 5 cut(s) 175, 330, 354, 381, 886
Hpy188III TCNNGA 7 cut(s) 302, 572, 662, 832, 1322, 1402, 1456
Hpy8I GTNNAC 5 cut(s) 220, 489, 706, 746, 1134
Hpy99I CGWCG 2 cut(s) 175, 535
HpyAV CCTTC 5 cut(s) 815, 969, 1141, 1165, 1378
HpyCH4III ACNGT 2 cut(s) 11, 1249
HpyCH4IV ACGT 4 cut(s) 180, 748, 1092, 1434
HpyF10VI GCNNNNNNNGC 8 cut(s) 270, 372, 624, 733, 822, 1264, 1313, 1357
HpyF3I CTNAG 4 cut(s) 329, 737, 817, 951
HpySE526I ACGT 4 cut(s) 180, 748, 1092, 1434
Hsp92I GRCGYC 2 cut(s) 325, 530
Hsp92II CATG 7 cut(s) 610, 767, 816, 830, 913, 989, 1070
HspAI GCGC 3 cut(s) 262, 373, 767
Ksp22I TGATCA 1 cut(s) 568
Kzo9I GATC 6 cut(s) 354, 376, 541, 568, 730, 1051
LguI GCTCTTC 1 cut(s) 1323
LmnI GCTCC 4 cut(s) 211, 237, 278, 1278
LweI GCATC 6 cut(s) 193, 258, 436, 462, 1024, 1168
MaeI CTAG 4 cut(s) 312, 1028, 1107, 1340
MaeII ACGT 4 cut(s) 180, 748, 1092, 1434
MaeIII GTNAC 2 cut(s) 1243, 1286
MalI GATC 6 cut(s) 356, 378, 543, 570, 732, 1053
MbiI CCGCTC 1 cut(s) 479
MboI GATC 6 cut(s) 354, 376, 541, 568, 730, 1051
MboII GAAGA 6 cut(s) 68, 929, 1056, 1310, 1322, 1367
MflI RGATCY 2 cut(s) 541, 1051
MlsI TGGCCA 2 cut(s) 1329, 1360
MluCI AATT 4 cut(s) 296, 398, 790, 1425
MluNI TGGCCA 2 cut(s) 1329, 1360
MlyI GAGTC 4 cut(s) 53, 92, 582, 803
MmeI TCCRAC 2 cut(s) 153, 786
Mox20I TGGCCA 2 cut(s) 1329, 1360
MroXI GAANNNNTTC 1 cut(s) 1317
MscI TGGCCA 2 cut(s) 1329, 1360
MseI TTAA 2 cut(s) 258, 546
MslI CAYNNNNRTG 1 cut(s) 990
Msp20I TGGCCA 2 cut(s) 1329, 1360
MspA1I CMGCKG 2 cut(s) 270, 741
MspI CCGG 3 cut(s) 28, 116, 692
MspR9I CCNGG 2 cut(s) 117, 1331
Mva1269I GAATGC 1 cut(s) 1184
MvaI CCWGG 1 cut(s) 1331
MvnI CGCG 2 cut(s) 375, 1418
MwoI GCNNNNNNNGC 8 cut(s) 270, 372, 624, 733, 822, 1264, 1313, 1357
NciI CCSGG 1 cut(s) 117
NcoI CCATGG 1 cut(s) 985
NdeI CATATG 1 cut(s) 964
NdeII GATC 6 cut(s) 354, 376, 541, 568, 730, 1051
NlaIII CATG 7 cut(s) 610, 767, 816, 830, 913, 989, 1070
NlaIV GGNNCC 3 cut(s) 114, 718, 957
NmuCI GTSAC 1 cut(s) 1243
PciSI GCTCTTC 1 cut(s) 1323
PcsI WCGNNNNNNNCGW 1 cut(s) 167
PctI GAATGC 1 cut(s) 1184
PdmI GAANNNNTTC 1 cut(s) 1317
PfeI GAWTC 4 cut(s) 287, 349, 580, 603
PflMI CCANNNNNTGG 1 cut(s) 301
PleI GAGTC 4 cut(s) 53, 92, 582, 803
PpsI GAGTC 4 cut(s) 53, 92, 582, 803
Ppu21I YACGTR 1 cut(s) 1093
Psp1406I AACGTT 2 cut(s) 180, 1434
Psp6I CCWGG 1 cut(s) 1329
PspGI CCWGG 1 cut(s) 1329
PspN4I GGNNCC 3 cut(s) 114, 718, 957
PstI CTGCAG 1 cut(s) 141
PstNI CAGNNNCTG 1 cut(s) 145
PsuI RGATCY 2 cut(s) 541, 1051
PvuII CAGCTG 1 cut(s) 270
RsaI GTAC 3 cut(s) 488, 640, 933
RsaNI GTAC 3 cut(s) 487, 639, 932
RseI CAYNNNNRTG 1 cut(s) 990
SapI GCTCTTC 1 cut(s) 1323
SaqAI TTAA 2 cut(s) 258, 546
Sau3AI GATC 6 cut(s) 354, 376, 541, 568, 730, 1051
SchI GAGTC 4 cut(s) 53, 92, 582, 803
ScrFI CCNGG 2 cut(s) 117, 1331
SfaNI GCATC 6 cut(s) 193, 258, 436, 462, 1024, 1168
SfcI CTRYAG 2 cut(s) 137, 634
SmiMI CAYNNNNRTG 1 cut(s) 990
Sse9I AATT 4 cut(s) 296, 398, 790, 1425
SsiI CCGC 5 cut(s) 276, 292, 479, 741, 1418
SspI AATATT 1 cut(s) 1074
SspMI CTAG 4 cut(s) 312, 1028, 1107, 1340
StyD4I CCNGG 2 cut(s) 115, 1329
StyI CCWWGG 2 cut(s) 985, 1446
TaaI ACNGT 2 cut(s) 11, 1249
TaiI ACGT 4 cut(s) 183, 751, 1095, 1437
TaqI TCGA 5 cut(s) 47, 54, 833, 1125, 1321
TasI AATT 4 cut(s) 296, 398, 790, 1425
TatI WGTACW 1 cut(s) 486
TauI GCSGC 1 cut(s) 482
TfiI GAWTC 4 cut(s) 287, 349, 580, 603
Tru1I TTAA 2 cut(s) 258, 546
Tru9I TTAA 2 cut(s) 258, 546
TscAI CASTG 2 cut(s) 130, 858
TseFI GTSAC 1 cut(s) 1243
Tsp45I GTSAC 1 cut(s) 1243
TspDTI ATGAA 7 cut(s) 426, 470, 595, 951, 1083, 1116, 1160
TspGWI ACGGA 2 cut(s) 93, 1291
TspRI CASTG 2 cut(s) 130, 858
Van91I CCANNNNNTGG 1 cut(s) 301
XapI RAATTY 3 cut(s) 398, 790, 1425
XmiI GTMKAC 2 cut(s) 219, 745
XmnI GAANNNNTTC 1 cut(s) 1317
XspI CTAG 4 cut(s) 312, 1028, 1107, 1340
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.