Zinc finger BED domain-containing protein
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| malus_domestica | MD11G1240400.v1.1 |
| pyrus_communis | pycom01g07040 pycom06g00120 pycom13g22940 pycom16g26070 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcsI | RAATTY | 1 cut(s) | 174 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 80, 209 |
| ApoI | RAATTY | 1 cut(s) | 174 |
| AseI | ATTAAT | 1 cut(s) | 234 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 76, 108 |
| BccI | CCATC | 1 cut(s) | 32 |
| BclI | TGATCA | 2 cut(s) | 76, 138 |
| BfaI | CTAG | 1 cut(s) | 132 |
| BfmI | CTRYAG | 1 cut(s) | 9 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 33, 63 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 80, 209 |
| Bse1I | ACTGG | 1 cut(s) | 214 |
| BseGI | GGATG | 1 cut(s) | 10 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 80, 209 |
| BseMII | CTCAG | 2 cut(s) | 216, 240 |
| BseNI | ACTGG | 1 cut(s) | 214 |
| BseRI | GAGGAG | 2 cut(s) | 189, 192 |
| BsiSI | CCGG | 1 cut(s) | 116 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 80, 209 |
| BsmI | GAATGC | 1 cut(s) | 72 |
| Bsp143I | GATC | 2 cut(s) | 76, 138 |
| BspCNI | CTCAG | 2 cut(s) | 217, 241 |
| BsrI | ACTGG | 1 cut(s) | 214 |
| BssMI | GATC | 2 cut(s) | 76, 138 |
| BstDEI | CTNAG | 3 cut(s) | 32, 225, 249 |
| BstF5I | GGATG | 1 cut(s) | 10 |
| BstKTI | GATC | 2 cut(s) | 79, 141 |
| BstMBI | GATC | 2 cut(s) | 76, 138 |
| BstNSI | RCATGY | 1 cut(s) | 196 |
| BstSFI | CTRYAG | 1 cut(s) | 9 |
| BtsCI | GGATG | 1 cut(s) | 10 |
| CviAII | CATG | 2 cut(s) | 80, 193 |
| CviJI | RGCY | 1 cut(s) | 131 |
| CviKI_1 | RGCY | 1 cut(s) | 131 |
| DdeI | CTNAG | 3 cut(s) | 32, 225, 249 |
| DpnI | GATC | 2 cut(s) | 78, 140 |
| DpnII | GATC | 2 cut(s) | 76, 138 |
| EcoT22I | ATGCAT | 1 cut(s) | 241 |
| FaeI | CATG | 2 cut(s) | 83, 196 |
| FaiI | YATR | 4 cut(s) | 81, 168, 194, 207 |
| FatI | CATG | 2 cut(s) | 79, 192 |
| FbaI | TGATCA | 2 cut(s) | 76, 138 |
| FokI | GGATG | 1 cut(s) | 17 |
| FspBI | CTAG | 1 cut(s) | 132 |
| HapII | CCGG | 1 cut(s) | 116 |
| Hin1II | CATG | 2 cut(s) | 83, 196 |
| HpaII | CCGG | 1 cut(s) | 116 |
| Hpy188I | TCNGA | 1 cut(s) | 226 |
| HpyCH4V | TGCA | 4 cut(s) | 70, 166, 218, 239 |
| HpyF3I | CTNAG | 3 cut(s) | 32, 225, 249 |
| Hsp92II | CATG | 2 cut(s) | 83, 196 |
| Ksp22I | TGATCA | 2 cut(s) | 76, 138 |
| Kzo9I | GATC | 2 cut(s) | 76, 138 |
| LpnPI | CCDG | 3 cut(s) | 87, 129, 195 |
| MaeI | CTAG | 1 cut(s) | 132 |
| MaeIII | GTNAC | 3 cut(s) | 55, 188, 244 |
| MalI | GATC | 2 cut(s) | 78, 140 |
| MboI | GATC | 2 cut(s) | 76, 138 |
| MboII | GAAGA | 1 cut(s) | 110 |
| MluCI | AATT | 4 cut(s) | 143, 161, 174, 231 |
| MnlI | CCTC | 4 cut(s) | 35, 207, 210, 213 |
| Mph1103I | ATGCAT | 1 cut(s) | 241 |
| MseI | TTAA | 2 cut(s) | 179, 234 |
| MslI | CAYNNNNRTG | 2 cut(s) | 84, 210 |
| MspI | CCGG | 1 cut(s) | 116 |
| Mva1269I | GAATGC | 1 cut(s) | 72 |
| NdeII | GATC | 2 cut(s) | 76, 138 |
| NlaIII | CATG | 2 cut(s) | 83, 196 |
| NmuCI | GTSAC | 3 cut(s) | 55, 188, 244 |
| NsiI | ATGCAT | 1 cut(s) | 241 |
| NspI | RCATGY | 1 cut(s) | 196 |
| PctI | GAATGC | 1 cut(s) | 72 |
| PshBI | ATTAAT | 1 cut(s) | 234 |
| RseI | CAYNNNNRTG | 2 cut(s) | 84, 210 |
| SaqAI | TTAA | 2 cut(s) | 179, 234 |
| Sau3AI | GATC | 2 cut(s) | 76, 138 |
| SetI | ASST | 2 cut(s) | 33, 76 |
| SfcI | CTRYAG | 1 cut(s) | 9 |
| SgeI | CNNG | 8 cut(s) | 29, 86, 92, 123, 128, 144, 205, 222 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 84, 210 |
| Sse9I | AATT | 4 cut(s) | 143, 161, 174, 231 |
| SspMI | CTAG | 1 cut(s) | 132 |
| TasI | AATT | 4 cut(s) | 143, 161, 174, 231 |
| Tru1I | TTAA | 2 cut(s) | 179, 234 |
| Tru9I | TTAA | 2 cut(s) | 179, 234 |
| TseFI | GTSAC | 3 cut(s) | 55, 188, 244 |
| Tsp45I | GTSAC | 3 cut(s) | 55, 188, 244 |
| VspI | ATTAAT | 1 cut(s) | 234 |
| XapI | RAATTY | 1 cut(s) | 174 |
| XceI | RCATGY | 1 cut(s) | 196 |
| XspI | CTAG | 1 cut(s) | 132 |
| Zsp2I | ATGCAT | 1 cut(s) | 241 |