ribonuclease H protein
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| Species | Orthologous Gene IDs |
|---|---|
| malus_domestica | MD11G1240400.v1.1 |
| pyrus_communis | pycom01g07040 pycom06g00120 pycom13g22940 pycom16g26070 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1185 |
| AarI | CACCTGC | 1 cut(s) | 2485 |
| Acc36I | ACCTGC | 4 cut(s) | 687, 2390, 2485, 4217 |
| Acc65I | GGTACC | 1 cut(s) | 2985 |
| AccB1I | GGYRCC | 3 cut(s) | 1967, 2985, 3906 |
| AccB7I | CCANNNNNTGG | 3 cut(s) | 681, 1911, 4163 |
| AccBSI | CCGCTC | 1 cut(s) | 4095 |
| AccI | GTMKAC | 1 cut(s) | 1732 |
| AccII | CGCG | 6 cut(s) | 726, 3220, 3222, 4203, 4283, 4475 |
| AclWI | GGATC | 8 cut(s) | 171, 1996, 2029, 2049, 2077, 2240, 3305, 3400 |
| AcuI | CTGAAG | 4 cut(s) | 2442, 2681, 3558, 5096 |
| AcyI | GRCGYC | 1 cut(s) | 3907 |
| AfaI | GTAC | 5 cut(s) | 1707, 2987, 3515, 4486, 5239 |
| AflII | CTTAAG | 2 cut(s) | 1825, 3586 |
| AflIII | ACRYGT | 2 cut(s) | 139, 2679 |
| AhlI | ACTAGT | 1 cut(s) | 1192 |
| AjnI | CCWGG | 5 cut(s) | 1646, 1848, 2118, 3236, 3553 |
| AjuI | GAANNNNNNNTTGG | 6 cut(s) | 489, 521, 866, 898, 2679, 2711 |
| AleI | CACNNNNGTG | 1 cut(s) | 2376 |
| AloI | GAACNNNNNNTCC | 4 cut(s) | 1611, 1643, 5192, 5224 |
| Alw21I | GWGCWC | 2 cut(s) | 1206, 1306 |
| AlwI | GGATC | 8 cut(s) | 171, 1996, 2029, 2049, 2077, 2240, 3305, 3400 |
| Ama87I | CYCGRG | 1 cut(s) | 1948 |
| AoxI | GGCC | 8 cut(s) | 617, 1742, 2171, 2300, 2514, 3094, 4066, 4154 |
| ApeKI | GCWGC | 3 cut(s) | 3067, 3667, 3954 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 4016, 4048 |
| AseI | ATTAAT | 2 cut(s) | 21, 4590 |
| Asp700I | GAANNNNTTC | 4 cut(s) | 1124, 1941, 4928, 4954 |
| Asp718I | GGTACC | 1 cut(s) | 2985 |
| AspA2I | CCTAGG | 1 cut(s) | 2225 |
| AspLEI | GCGC | 5 cut(s) | 2802, 3222, 3224, 3909, 4173 |
| AsuC2I | CCSGG | 1 cut(s) | 2672 |
| AsuII | TTCGAA | 2 cut(s) | 3758, 3892 |
| AsuNHI | GCTAGC | 1 cut(s) | 3415 |
| AvaI | CYCGRG | 1 cut(s) | 1948 |
| AvaII | GGWCC | 6 cut(s) | 699, 1644, 2042, 2271, 2312, 4347 |
| AvrII | CCTAGG | 1 cut(s) | 2225 |
| BaeGI | GKGCMC | 1 cut(s) | 4257 |
| BanI | GGYRCC | 3 cut(s) | 1967, 2985, 3906 |
| BanII | GRGCYC | 1 cut(s) | 4504 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 1018, 1050 |
| BauI | CACGAG | 1 cut(s) | 1909 |
| BbsI | GAAGAC | 5 cut(s) | 1787, 2687, 3111, 4064, 5068 |
| Bbv12I | GWGCWC | 2 cut(s) | 1206, 1306 |
| BbvCI | CCTCAGC | 2 cut(s) | 375, 2891 |
| BbvI | GCAGC | 3 cut(s) | 3054, 3654, 3941 |
| BceAI | ACGGC | 5 cut(s) | 387, 2389, 3109, 3576, 4053 |
| BciT130I | CCWGG | 5 cut(s) | 1648, 1850, 2120, 3238, 3555 |
| BclI | TGATCA | 4 cut(s) | 1018, 1569, 1605, 2854 |
| BcnI | CCSGG | 1 cut(s) | 2672 |
| BcuI | ACTAGT | 1 cut(s) | 1192 |
| BfmI | CTRYAG | 2 cut(s) | 621, 951 |
| BfoI | RGCGCY | 2 cut(s) | 2803, 3910 |
| BfrI | CTTAAG | 2 cut(s) | 1825, 3586 |
| BfuAI | ACCTGC | 4 cut(s) | 687, 2390, 2485, 4217 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 1750 |
| BglII | AGATCT | 1 cut(s) | 2436 |
| BisI | GCNGC | 7 cut(s) | 1374, 1419, 3068, 3668, 3955, 3988, 4038 |
| BlnI | CCTAGG | 1 cut(s) | 2225 |
| BlpI | GCTNAGC | 1 cut(s) | 2897 |
| BlsI | GCNGC | 7 cut(s) | 1375, 1420, 3069, 3669, 3956, 3989, 4039 |
| BmcAI | AGTACT | 1 cut(s) | 3515 |
| Bme1390I | CCNGG | 6 cut(s) | 1648, 1850, 2120, 2672, 3238, 3555 |
| Bme18I | GGWCC | 6 cut(s) | 699, 1644, 2042, 2271, 2312, 4347 |
| BmeT110I | CYCGRG | 1 cut(s) | 1948 |
| BmiI | GGNNCC | 6 cut(s) | 1874, 1969, 2987, 3470, 3908, 4501 |
| BmrFI | CCNGG | 6 cut(s) | 1648, 1850, 2120, 2672, 3238, 3555 |
| BmrI | ACTGGG | 1 cut(s) | 4972 |
| BmtI | GCTAGC | 1 cut(s) | 3419 |
| BmuI | ACTGGG | 1 cut(s) | 4972 |
| BpiI | GAAGAC | 5 cut(s) | 1787, 2687, 3111, 4064, 5068 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 1480, 1512 |
| BpmI | CTGGAG | 2 cut(s) | 447, 4297 |
| Bpu10I | CCTNAGC | 4 cut(s) | 375, 1595, 2891, 4394 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 2897 |
| Bpu14I | TTCGAA | 2 cut(s) | 3758, 3892 |
| BpuEI | CTTGAG | 1 cut(s) | 3634 |
| BpuMI | CCSGG | 1 cut(s) | 2672 |
| Bsa29I | ATCGAT | 3 cut(s) | 1079, 1809, 2487 |
| BsaAI | YACGTR | 2 cut(s) | 142, 4662 |
| BsaBI | GATNNNNATC | 2 cut(s) | 1047, 3315 |
| BsaHI | GRCGYC | 1 cut(s) | 3907 |
| BsaI | GGTCTC | 5 cut(s) | 1113, 1761, 3012, 3447, 4140 |
| BsaJI | CCNNGG | 9 cut(s) | 1662, 2225, 2658, 2670, 2978, 3237, 3457, 3933, 4139 |
| BsaWI | WCCGGW | 1 cut(s) | 330 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 975, 1005 |
| Bse1I | ACTGG | 5 cut(s) | 1820, 4349, 4482, 4488, 4978 |
| Bse3DI | GCAATG | 2 cut(s) | 948, 3748 |
| Bse8I | GATNNNNATC | 2 cut(s) | 1047, 3315 |
| BseBI | CCWGG | 5 cut(s) | 1648, 1850, 2120, 3238, 3555 |
| BseCI | ATCGAT | 3 cut(s) | 1079, 1809, 2487 |
| BseDI | CCNNGG | 9 cut(s) | 1662, 2225, 2658, 2670, 2978, 3237, 3457, 3933, 4139 |
| BseGI | GGATG | 8 cut(s) | 297, 952, 1541, 1892, 2485, 2680, 3726, 4008 |
| BseJI | GATNNNNATC | 2 cut(s) | 1047, 3315 |
| BseMI | GCAATG | 2 cut(s) | 948, 3748 |
| BseNI | ACTGG | 5 cut(s) | 1820, 4349, 4482, 4488, 4978 |
| BsePI | GCGCGC | 1 cut(s) | 3220 |
| BseRI | GAGGAG | 6 cut(s) | 293, 1791, 2114, 3407, 4236, 4251 |
| BseSI | GKGCMC | 1 cut(s) | 4257 |
| BseXI | GCAGC | 3 cut(s) | 3054, 3654, 3941 |
| BseYI | CCCAGC | 3 cut(s) | 2802, 4866, 4914 |
| Bsh1236I | CGCG | 6 cut(s) | 726, 3220, 3222, 4203, 4283, 4475 |
| Bsh1285I | CGRYCG | 2 cut(s) | 2487, 5083 |
| BshFI | GGCC | 8 cut(s) | 619, 1744, 2173, 2302, 2516, 3096, 4068, 4156 |
| BshNI | GGYRCC | 3 cut(s) | 1967, 2985, 3906 |
| BshVI | ATCGAT | 3 cut(s) | 1079, 1809, 2487 |
| BsiEI | CGRYCG | 2 cut(s) | 2487, 5083 |
| BsiHKAI | GWGCWC | 2 cut(s) | 1206, 1306 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1948 |
| BsiSI | CCGG | 3 cut(s) | 331, 1058, 2672 |
| BslFI | GGGAC | 7 cut(s) | 624, 657, 1474, 2668, 3254, 3437, 5182 |
| BsmBI | CGTCTC | 4 cut(s) | 278, 2944, 3304, 5058 |
| BsmFI | GGGAC | 7 cut(s) | 624, 657, 1474, 2668, 3254, 3437, 5182 |
| BsmI | GAATGC | 1 cut(s) | 3904 |
| BsnI | GGCC | 8 cut(s) | 619, 1744, 2173, 2302, 2516, 3096, 4068, 4156 |
| Bso31I | GGTCTC | 5 cut(s) | 1113, 1761, 3012, 3447, 4140 |
| BsoBI | CYCGRG | 1 cut(s) | 1948 |
| Bsp119I | TTCGAA | 2 cut(s) | 3758, 3892 |
| Bsp1286I | GDGCHC | 4 cut(s) | 1206, 1306, 4257, 4504 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 2897 |
| Bsp68I | TCGCGA | 1 cut(s) | 726 |
| BspANI | GGCC | 8 cut(s) | 619, 1744, 2173, 2302, 2516, 3096, 4068, 4156 |
| BspDI | ATCGAT | 3 cut(s) | 1079, 1809, 2487 |
| BspFNI | CGCG | 6 cut(s) | 726, 3220, 3222, 4203, 4283, 4475 |
| BspLI | GGNNCC | 6 cut(s) | 1874, 1969, 2987, 3470, 3908, 4501 |
| BspMI | ACCTGC | 4 cut(s) | 687, 2390, 2485, 4217 |
| BspOI | GCTAGC | 1 cut(s) | 3419 |
| BspPI | GGATC | 8 cut(s) | 171, 1996, 2029, 2049, 2077, 2240, 3305, 3400 |
| BspT104I | TTCGAA | 2 cut(s) | 3758, 3892 |
| BspT107I | GGYRCC | 3 cut(s) | 1967, 2985, 3906 |
| BspTI | CTTAAG | 2 cut(s) | 1825, 3586 |
| BspTNI | GGTCTC | 5 cut(s) | 1113, 1761, 3012, 3447, 4140 |
| BsrBI | CCGCTC | 1 cut(s) | 4095 |
| BsrDI | GCAATG | 2 cut(s) | 948, 3748 |
| BsrI | ACTGG | 5 cut(s) | 1820, 4349, 4482, 4488, 4978 |
| BssECI | CCNNGG | 9 cut(s) | 1662, 2225, 2658, 2670, 2978, 3237, 3457, 3933, 4139 |
| BssHII | GCGCGC | 1 cut(s) | 3220 |
| BssNI | GRCGYC | 1 cut(s) | 3907 |
| BssSI | CACGAG | 1 cut(s) | 1909 |
| BssT1I | CCWWGG | 6 cut(s) | 1662, 2225, 2658, 2978, 3457, 3933 |
| Bst2BI | CACGAG | 1 cut(s) | 1909 |
| Bst2UI | CCWGG | 5 cut(s) | 1648, 1850, 2120, 3238, 3555 |
| Bst4CI | ACNGT | 9 cut(s) | 615, 1267, 1612, 1637, 2082, 2312, 2741, 3857, 5187 |
| Bst6I | CTCTTC | 6 cut(s) | 227, 1631, 2538, 3301, 4357, 4773 |
| BstACI | GRCGYC | 1 cut(s) | 3907 |
| BstAFI | CTTAAG | 2 cut(s) | 1825, 3586 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 947, 1241 |
| BstBAI | YACGTR | 2 cut(s) | 142, 4662 |
| BstBI | TTCGAA | 2 cut(s) | 3758, 3892 |
| BstDSI | CCRYGG | 1 cut(s) | 4139 |
| BstEII | GGTNACC | 1 cut(s) | 3490 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 2521 |
| BstF5I | GGATG | 8 cut(s) | 297, 952, 1541, 1892, 2485, 2680, 3726, 4008 |
| BstFNI | CGCG | 6 cut(s) | 726, 3220, 3222, 4203, 4283, 4475 |
| BstH2I | RGCGCY | 2 cut(s) | 2803, 3910 |
| BstHHI | GCGC | 5 cut(s) | 2802, 3222, 3224, 3909, 4173 |
| BstMCI | CGRYCG | 2 cut(s) | 2487, 5083 |
| BstNI | CCWGG | 5 cut(s) | 1648, 1850, 2120, 3238, 3555 |
| BstNSI | RCATGY | 5 cut(s) | 449, 2683, 2937, 4648, 4799 |
| BstPI | GGTNACC | 1 cut(s) | 3490 |
| BstSCI | CCNGG | 6 cut(s) | 1646, 1848, 2118, 2670, 3236, 3553 |
| BstSFI | CTRYAG | 2 cut(s) | 621, 951 |
| BstSLI | GKGCMC | 1 cut(s) | 4257 |
| BstUI | CGCG | 6 cut(s) | 726, 3220, 3222, 4203, 4283, 4475 |
| BstV1I | GCAGC | 3 cut(s) | 3054, 3654, 3941 |
| BstV2I | GAAGAC | 5 cut(s) | 1787, 2687, 3111, 4064, 5068 |
| BstX2I | RGATCY | 6 cut(s) | 1988, 2021, 2054, 2436, 3310, 3405 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 2169 |
| BstYI | RGATCY | 6 cut(s) | 1988, 2021, 2054, 2436, 3310, 3405 |
| Bsu15I | ATCGAT | 3 cut(s) | 1079, 1809, 2487 |
| BsuRI | GGCC | 8 cut(s) | 619, 1744, 2173, 2302, 2516, 3096, 4068, 4156 |
| BsuTUI | ATCGAT | 3 cut(s) | 1079, 1809, 2487 |
| BtgI | CCRYGG | 1 cut(s) | 4139 |
| BtgZI | GCGATG | 1 cut(s) | 3462 |
| BtsCI | GGATG | 8 cut(s) | 297, 952, 1541, 1892, 2485, 2680, 3726, 4008 |
| BtsIMutI | CAGTG | 5 cut(s) | 996, 1601, 1608, 1813, 4342 |
| BtuMI | TCGCGA | 1 cut(s) | 726 |
| BveI | ACCTGC | 4 cut(s) | 687, 2390, 2485, 4217 |
| CfoI | GCGC | 5 cut(s) | 2802, 3222, 3224, 3909, 4173 |
| ClaI | ATCGAT | 3 cut(s) | 1079, 1809, 2487 |
| CseI | GACGC | 3 cut(s) | 1743, 2926, 4464 |
| CsiI | ACCWGGT | 1 cut(s) | 3553 |
| Csp6I | GTAC | 5 cut(s) | 1706, 2986, 3514, 4485, 5238 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 2020, 2055 |
| CviQI | GTAC | 5 cut(s) | 1706, 2986, 3514, 4485, 5238 |
| DinI | GGCGCC | 1 cut(s) | 3908 |
| DraI | TTTAAA | 2 cut(s) | 3885, 5011 |
| Eam1104I | CTCTTC | 6 cut(s) | 227, 1631, 2538, 3301, 4357, 4773 |
| EarI | CTCTTC | 6 cut(s) | 227, 1631, 2538, 3301, 4357, 4773 |
| Eco130I | CCWWGG | 6 cut(s) | 1662, 2225, 2658, 2978, 3457, 3933 |
| Eco147I | AGGCCT | 1 cut(s) | 2516 |
| Eco24I | GRGCYC | 1 cut(s) | 4504 |
| Eco31I | GGTCTC | 5 cut(s) | 1113, 1761, 3012, 3447, 4140 |
| Eco32I | GATATC | 2 cut(s) | 1678, 3922 |
| Eco47I | GGWCC | 6 cut(s) | 699, 1644, 2042, 2271, 2312, 4347 |
| Eco57I | CTGAAG | 4 cut(s) | 2442, 2681, 3558, 5096 |
| Eco88I | CYCGRG | 1 cut(s) | 1948 |
| Eco91I | GGTNACC | 1 cut(s) | 3490 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 2521 |
| EcoO109I | RGGNCCY | 2 cut(s) | 699, 1644 |
| EcoO65I | GGTNACC | 1 cut(s) | 3490 |
| EcoRI | GAATTC | 1 cut(s) | 5101 |
| EcoRII | CCWGG | 5 cut(s) | 1646, 1848, 2118, 3236, 3553 |
| EcoRV | GATATC | 2 cut(s) | 1678, 3922 |
| EcoT14I | CCWWGG | 6 cut(s) | 1662, 2225, 2658, 2978, 3457, 3933 |
| EcoT22I | ATGCAT | 1 cut(s) | 1285 |
| EcoT38I | GRGCYC | 1 cut(s) | 4504 |
| EgeI | GGCGCC | 1 cut(s) | 3908 |
| EheI | GGCGCC | 1 cut(s) | 3908 |
| ErhI | CCWWGG | 6 cut(s) | 1662, 2225, 2658, 2978, 3457, 3933 |
| Esp3I | CGTCTC | 4 cut(s) | 278, 2944, 3304, 5058 |
| FalI | AAGNNNNNCTT | 8 cut(s) | 1852, 1884, 2618, 2650, 3926, 3958, 4916, 4948 |
| FaqI | GGGAC | 7 cut(s) | 624, 657, 1474, 2668, 3254, 3437, 5182 |
| FauI | CCCGC | 2 cut(s) | 1450, 3840 |
| FauNDI | CATATG | 2 cut(s) | 551, 1880 |
| FbaI | TGATCA | 4 cut(s) | 1018, 1569, 1605, 2854 |
| FblI | GTMKAC | 1 cut(s) | 1732 |
| Fnu4HI | GCNGC | 7 cut(s) | 1374, 1419, 3068, 3668, 3955, 3988, 4038 |
| FokI | GGATG | 8 cut(s) | 284, 959, 1528, 1879, 2492, 2687, 3713, 3995 |
| FriOI | GRGCYC | 1 cut(s) | 4504 |
| Fsp4HI | GCNGC | 7 cut(s) | 1374, 1419, 3068, 3668, 3955, 3988, 4038 |
| GlaI | GCGC | 5 cut(s) | 2801, 3221, 3223, 3908, 4172 |
| GluI | GCNGC | 7 cut(s) | 1374, 1419, 3068, 3668, 3955, 3988, 4038 |
| GsaI | CCCAGC | 3 cut(s) | 2806, 4870, 4918 |
| GsuI | CTGGAG | 2 cut(s) | 447, 4297 |
| HaeII | RGCGCY | 2 cut(s) | 2803, 3910 |
| HaeIII | GGCC | 8 cut(s) | 619, 1744, 2173, 2302, 2516, 3096, 4068, 4156 |
| HapII | CCGG | 3 cut(s) | 331, 1058, 2672 |
| HgaI | GACGC | 3 cut(s) | 1743, 2926, 4464 |
| HhaI | GCGC | 5 cut(s) | 2802, 3222, 3224, 3909, 4173 |
| Hin1I | GRCGYC | 1 cut(s) | 3907 |
| Hin6I | GCGC | 5 cut(s) | 2800, 3220, 3222, 3907, 4171 |
| HinP1I | GCGC | 5 cut(s) | 2800, 3220, 3222, 3907, 4171 |
| HincII | GTYRAC | 6 cut(s) | 109, 1248, 1733, 2260, 3604, 3940 |
| HindII | GTYRAC | 6 cut(s) | 109, 1248, 1733, 2260, 3604, 3940 |
| HindIII | AAGCTT | 1 cut(s) | 4275 |
| HpaI | GTTAAC | 2 cut(s) | 1248, 3604 |
| HpaII | CCGG | 3 cut(s) | 331, 1058, 2672 |
| Hpy99I | CGWCG | 4 cut(s) | 273, 1406, 1737, 3001 |
| HpyCH4III | ACNGT | 9 cut(s) | 615, 1267, 1612, 1637, 2082, 2312, 2741, 3857, 5187 |
| HpyCH4IV | ACGT | 6 cut(s) | 9, 141, 2883, 3297, 4661, 5051 |
| HpySE526I | ACGT | 6 cut(s) | 9, 141, 2883, 3297, 4661, 5051 |
| Hsp92I | GRCGYC | 1 cut(s) | 3907 |
| HspAI | GCGC | 5 cut(s) | 2800, 3220, 3222, 3907, 4171 |
| KasI | GGCGCC | 1 cut(s) | 3906 |
| KpnI | GGTACC | 1 cut(s) | 2989 |
| Ksp22I | TGATCA | 4 cut(s) | 1018, 1569, 1605, 2854 |
| KspAI | GTTAAC | 2 cut(s) | 1248, 3604 |
| LmnI | GCTCC | 2 cut(s) | 3468, 4499 |
| Lsp1109I | GCAGC | 3 cut(s) | 3054, 3654, 3941 |
| MabI | ACCWGGT | 1 cut(s) | 3553 |
| MaeII | ACGT | 6 cut(s) | 9, 141, 2883, 3297, 4661, 5051 |
| MbiI | CCGCTC | 1 cut(s) | 4095 |
| MfeI | CAATTG | 1 cut(s) | 686 |
| MflI | RGATCY | 6 cut(s) | 1988, 2021, 2054, 2436, 3310, 3405 |
| MhlI | GDGCHC | 4 cut(s) | 1206, 1306, 4257, 4504 |
| Mly113I | GGCGCC | 1 cut(s) | 3907 |
| MlyI | GAGTC | 6 cut(s) | 321, 2104, 3554, 3706, 4199, 4372 |
| MmeI | TCCRAC | 4 cut(s) | 186, 1319, 2101, 3271 |
| Mph1103I | ATGCAT | 1 cut(s) | 1285 |
| MroXI | GAANNNNTTC | 4 cut(s) | 1124, 1941, 4928, 4954 |
| MspA1I | CMGCKG | 2 cut(s) | 169, 2462 |
| MspCI | CTTAAG | 2 cut(s) | 1825, 3586 |
| MspI | CCGG | 3 cut(s) | 331, 1058, 2672 |
| MspR9I | CCNGG | 6 cut(s) | 1648, 1850, 2120, 2672, 3238, 3555 |
| MunI | CAATTG | 1 cut(s) | 686 |
| Mva1269I | GAATGC | 1 cut(s) | 3904 |
| MvaI | CCWGG | 5 cut(s) | 1648, 1850, 2120, 3238, 3555 |
| MvnI | CGCG | 6 cut(s) | 726, 3220, 3222, 4203, 4283, 4475 |
| NarI | GGCGCC | 1 cut(s) | 3907 |
| NciI | CCSGG | 1 cut(s) | 2672 |
| NdeI | CATATG | 2 cut(s) | 551, 1880 |
| NheI | GCTAGC | 1 cut(s) | 3415 |
| NlaIV | GGNNCC | 6 cut(s) | 1874, 1969, 2987, 3470, 3908, 4501 |
| NmuCI | GTSAC | 6 cut(s) | 1599, 2046, 2416, 2497, 3490, 3557 |
| NruI | TCGCGA | 1 cut(s) | 726 |
| NsiI | ATGCAT | 1 cut(s) | 1285 |
| NspI | RCATGY | 5 cut(s) | 449, 2683, 2937, 4648, 4799 |
| NspV | TTCGAA | 2 cut(s) | 3758, 3892 |
| OliI | CACNNNNGTG | 1 cut(s) | 2376 |
| PacI | TTAATTAA | 1 cut(s) | 48 |
| PaeI | GCATGC | 1 cut(s) | 4648 |
| PaqCI | CACCTGC | 1 cut(s) | 2485 |
| PauI | GCGCGC | 1 cut(s) | 3220 |
| PceI | AGGCCT | 1 cut(s) | 2516 |
| PciI | ACATGT | 1 cut(s) | 2679 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 1480, 3099 |
| PctI | GAATGC | 1 cut(s) | 3904 |
| PdmI | GAANNNNTTC | 4 cut(s) | 1124, 1941, 4928, 4954 |
| PfeI | GAWTC | 6 cut(s) | 422, 497, 1442, 3968, 4306, 4861 |
| PflMI | CCANNNNNTGG | 3 cut(s) | 681, 1911, 4163 |
| PkrI | GCNGC | 7 cut(s) | 1375, 1420, 3069, 3669, 3956, 3989, 4039 |
| Ple19I | CGATCG | 2 cut(s) | 2487, 5083 |
| PleI | GAGTC | 6 cut(s) | 321, 2104, 3554, 3705, 4199, 4372 |
| PluTI | GGCGCC | 1 cut(s) | 3910 |
| PpsI | GAGTC | 6 cut(s) | 321, 2104, 3554, 3705, 4199, 4372 |
| Ppu21I | YACGTR | 2 cut(s) | 142, 4662 |
| PpuMI | RGGWCCY | 2 cut(s) | 699, 1644 |
| PscI | ACATGT | 1 cut(s) | 2679 |
| PshBI | ATTAAT | 2 cut(s) | 21, 4590 |
| PsiI | TTATAA | 1 cut(s) | 1185 |
| Psp5II | RGGWCCY | 2 cut(s) | 699, 1644 |
| Psp6I | CCWGG | 5 cut(s) | 1646, 1848, 2118, 3236, 3553 |
| PspEI | GGTNACC | 1 cut(s) | 3490 |
| PspFI | CCCAGC | 3 cut(s) | 2802, 4866, 4914 |
| PspGI | CCWGG | 5 cut(s) | 1646, 1848, 2118, 3236, 3553 |
| PspN4I | GGNNCC | 6 cut(s) | 1874, 1969, 2987, 3470, 3908, 4501 |
| PspPPI | RGGWCCY | 2 cut(s) | 699, 1644 |
| PsuI | RGATCY | 6 cut(s) | 1988, 2021, 2054, 2436, 3310, 3405 |
| PteI | GCGCGC | 1 cut(s) | 3220 |
| PvuI | CGATCG | 2 cut(s) | 2487, 5083 |
| PvuII | CAGCTG | 2 cut(s) | 169, 2462 |
| RruI | TCGCGA | 1 cut(s) | 726 |
| RsaI | GTAC | 5 cut(s) | 1707, 2987, 3515, 4486, 5239 |
| RsaNI | GTAC | 5 cut(s) | 1706, 2986, 3514, 4485, 5238 |
| SalI | GTCGAC | 1 cut(s) | 1731 |
| SatI | GCNGC | 7 cut(s) | 1374, 1419, 3068, 3668, 3955, 3988, 4038 |
| ScaI | AGTACT | 1 cut(s) | 3515 |
| SchI | GAGTC | 6 cut(s) | 321, 2104, 3554, 3706, 4199, 4372 |
| ScrFI | CCNGG | 6 cut(s) | 1648, 1850, 2120, 2672, 3238, 3555 |
| SduI | GDGCHC | 4 cut(s) | 1206, 1306, 4257, 4504 |
| SexAI | ACCWGGT | 1 cut(s) | 3553 |
| SfcI | CTRYAG | 2 cut(s) | 621, 951 |
| SfoI | GGCGCC | 1 cut(s) | 3908 |
| SfuI | TTCGAA | 2 cut(s) | 3758, 3892 |
| SinI | GGWCC | 6 cut(s) | 699, 1644, 2042, 2271, 2312, 4347 |
| SmlI | CTYRAG | 3 cut(s) | 1825, 3586, 3613 |
| SmoI | CTYRAG | 3 cut(s) | 1825, 3586, 3613 |
| SpeI | ACTAGT | 1 cut(s) | 1192 |
| SphI | GCATGC | 1 cut(s) | 4648 |
| SseBI | AGGCCT | 1 cut(s) | 2516 |
| SspDI | GGCGCC | 1 cut(s) | 3906 |
| SspI | AATATT | 1 cut(s) | 3378 |
| StuI | AGGCCT | 1 cut(s) | 2516 |
| StyD4I | CCNGG | 6 cut(s) | 1646, 1848, 2118, 2670, 3236, 3553 |
| StyI | CCWWGG | 6 cut(s) | 1662, 2225, 2658, 2978, 3457, 3933 |
| TaaI | ACNGT | 9 cut(s) | 615, 1267, 1612, 1637, 2082, 2312, 2741, 3857, 5187 |
| TaiI | ACGT | 6 cut(s) | 12, 144, 2886, 3300, 4664, 5054 |
| TaqII | GACCGA | 1 cut(s) | 2259 |
| TatI | WGTACW | 1 cut(s) | 3513 |
| TauI | GCSGC | 4 cut(s) | 1376, 1421, 3990, 4040 |
| TfiI | GAWTC | 6 cut(s) | 422, 497, 1442, 3968, 4306, 4861 |
| TscAI | CASTG | 5 cut(s) | 996, 1608, 1615, 1820, 4349 |
| TseFI | GTSAC | 6 cut(s) | 1599, 2046, 2416, 2497, 3490, 3557 |
| TseI | GCWGC | 3 cut(s) | 3067, 3667, 3954 |
| Tsp45I | GTSAC | 6 cut(s) | 1599, 2046, 2416, 2497, 3490, 3557 |
| TspGWI | ACGGA | 9 cut(s) | 296, 1779, 2034, 2081, 2681, 2786, 3121, 3918, 4512 |
| TspRI | CASTG | 5 cut(s) | 996, 1608, 1615, 1820, 4349 |
| Van91I | CCANNNNNTGG | 3 cut(s) | 681, 1911, 4163 |
| Vha464I | CTTAAG | 2 cut(s) | 1825, 3586 |
| VpaK11BI | GGWCC | 6 cut(s) | 699, 1644, 2042, 2271, 2312, 4347 |
| VspI | ATTAAT | 2 cut(s) | 21, 4590 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 2521 |
| XbaI | TCTAGA | 3 cut(s) | 2734, 3302, 4381 |
| XceI | RCATGY | 5 cut(s) | 449, 2683, 2937, 4648, 4799 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 1912, 2139 |
| XmaJI | CCTAGG | 1 cut(s) | 2225 |
| XmiI | GTMKAC | 1 cut(s) | 1732 |
| XmnI | GAANNNNTTC | 4 cut(s) | 1124, 1941, 4928, 4954 |
| ZrmI | AGTACT | 1 cut(s) | 3515 |
| Zsp2I | ATGCAT | 1 cut(s) | 1285 |