MD11G1285100.v1.1

Chloroplast stem-loop binding protein of 41 kDa a

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr11
OG0016578
Physical Location & Seq
Reverse (-)
40348678 .. 40354000
5323 bp
Loading structure...
UTR
Exon/CDS
Intron
MD11G1285100.v1.1.491

Sequence Viewer

Length: 1212 bp
ATGGCCACTCTTGCTTCATCCTTCTCCTCTGTGCTCTTCTCCTCCACACCCTCCAACCTCTCTCCGCCGTCTCTCTCCCCTCTCCCCCGCCTCTCTCTCTCCTCCTCCTCCCACTTCTCCACTCTCCCCTCCTCCCTCTCAGCTTCTCACTCTTTCCTCACACACCCTGCCACTTCCAGGCGCTCCAACCATTGTTCCTTCAGCATCAAGGCCAGTGCGGAGGAGAAGAAAAAGGTCTTGATAGTCAACACCAACAGCGGTGGCCACGCGGTTATCGGATTCTACTTTGCCAAAGAGCTTCTCGGTTCCGGCTACGATGTCACAGTCTTGACAGTTGGTGAAGAAAGATCGGACAAGATGAAGAAGCCCCCATTTACCAGATTCTCAGAAATTGTAAGTGCTGGAGGGAAGACAGTGTGGGGAGAACCTGCGGCAATTGGGACGATTTTCGAAGGAGCAGCATTTGATGTTGTGTTGGATAACAATGGCAAAGATTTGGACACTGTGAGGCCTGTGGCAGATTGGGCGAAGAGCTCCGGTGCGAAGCAATTTCTGTTCATCAGCAGTGCTGGAATTTATAAACCAACTGAGGAGCCTCCTCATGTTGAAGGCGATGCTGTTAAAGCAGATGCTGGTCATGTTGCAGTAGAGAAGTACATTGCAGAGATATTTGGTAGCTGGGCAATTTTCCGTCCCCAGTACATGTTAGGCTCCGGCAACAACAAAGATTGTGAGGAGTGGTTCTTCGACCGAATTGTGAGGGACAGACCAGTTCCAATCCCTGGTTCCGGAATGCAACTTACCAACATCTCCCACGTTCGAGACTTGTCCTCCATGCTCACTCTAGCCGTTGAGAACCCGGATGCTGCATCTGGTAACATCTTCAACATTGTAAGCGAGCGTGCTGTGACTCTCGACGGATTGGCAAAACTTTGTGCTCAAGCTGCCGGACGCCCTGCCAACATAGTCCATTATGATCCAAAAGCTGCTGGAGTTGATGCAAAGAAAGCCTTCCCATTCCGTAACATGCACTTCTATGCAGAACCAAGAGCTGCCAAGGAGATTTTGGGTTGGAAGTCCACCACAAACCTCGCCGAGGACTTGAAGGAGCGATTTGAAGAGTACTTGAAGATTGGGAGAGACAAGAAAGCCATCAAATTTGAGTTAGATGACAAGATACTCGAGTCGCTTAAAGTTCCAGTAGCAGTGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0003676 GO:0003723 GO:0003727 GO:0005488 GO:0005575 GO:0005576 GO:0005622 GO:0005623 GO:0005737 GO:0005840 GO:0006139 GO:0006355 GO:0006364 GO:0006396 GO:0006412 GO:0006417 GO:0006518 GO:0006725 GO:0006807 GO:0006996 GO:0007623 GO:0008150 GO:0008152 GO:0008187 GO:0008266 GO:0009058 GO:0009059 GO:0009507 GO:0009526 GO:0009532 GO:0009534 GO:0009536 GO:0009570 GO:0009579 GO:0009657 GO:0009658 GO:0009719 GO:0009725 GO:0009735 GO:0009889 GO:0009891 GO:0009893 GO:0009941 GO:0009987 GO:0010033 GO:0010287 GO:0010319 GO:0010467 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010608 GO:0010628 GO:0016043 GO:0016070 GO:0016072 GO:0019219 GO:0019222 GO:0019538 GO:0022613 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0031967 GO:0031975 GO:0031976 GO:0031984 GO:0032268 GO:0032270 GO:0032544 GO:0032991 GO:0034248 GO:0034250 GO:0034470 GO:0034641 GO:0034645 GO:0034660 GO:0042221 GO:0042254 GO:0043043 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043603 GO:0043604 GO:0044085 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044271 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0045727 GO:0045893 GO:0045935 GO:0046483 GO:0048046 GO:0048511 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051173 GO:0051246 GO:0051247 GO:0051252 GO:0051254 GO:0060255 GO:0065007 GO:0071704 GO:0071840 GO:0080090 GO:0090304 GO:0097159 GO:1901360 GO:1901363 GO:1901564 GO:1901566 GO:1901576 GO:1902680 GO:1903506 GO:1903508 GO:1990904 GO:2000112 GO:2001141
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Epimerase

Protein Analysis

404

Amino Acids

43.72

Weight (kDa)

7.16

Isoelectric Point (pI)

44.6

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Epimerase PF01370 87 - 297 2.5e-10 NAD dependent epimerase/dehydratase family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0016578)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G63140
fragaria_vesca FvH4_2g23570
malus_domestica MD11G1285100.v1.1
prunus_persica Prupe.8G241000_v2.0.a1
pyrus_communis pycom11g25270
rosa_chinensis RchiOBHm_Chr6g0291041
rosa_laevigata RLG00000012152
rosa_multiflora Rmu_sc0004642.1_g000002
rosa_roxburghii Rroxscaffold_7G00176430
rosa_rugosa Rorug06G0217200
rosa_samantha Rh6AG327200 Rh6BG334700 Rh6CG340900
rosa_wichuraiana Rw6G028460

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 579
Acc36I ACCTGC 1 cut(s) 436
AccB7I CCANNNNNTGG 1 cut(s) 782
AccII CGCG 1 cut(s) 269
AccIII TCCGGA 1 cut(s) 788
AciI CCGC 6 cut(s) 65, 88, 218, 258, 269, 431
AclWI GGATC 1 cut(s) 971
AcoI YGGCCR 2 cut(s) 3, 262
AcsI RAATTY 2 cut(s) 573, 1157
AcuI CTGAAG 1 cut(s) 184
AcyI GRCGYC 1 cut(s) 952
AfaI GTAC 3 cut(s) 656, 701, 1124
AfiI CCNNNNNNNGG 4 cut(s) 177, 782, 788, 1096
AflIII ACRYGT 1 cut(s) 702
AgsI TTSAA 5 cut(s) 608, 886, 1105, 1118, 1129
AjnI CCWGG 2 cut(s) 176, 781
AjuI GAANNNNNNNTTGG 2 cut(s) 769, 801
AluBI AGCT 7 cut(s) 143, 298, 534, 678, 944, 986, 1052
AluI AGCT 7 cut(s) 143, 298, 534, 678, 944, 986, 1052
Alw21I GWGCWC 3 cut(s) 36, 536, 940
Alw26I GTCTC 3 cut(s) 75, 816, 1134
AlwI GGATC 1 cut(s) 971
AlwNI CAGNNNCTG 1 cut(s) 632
Ama87I CYCGRG 1 cut(s) 1181
Aor13HI TCCGGA 1 cut(s) 788
AoxI GGCC 4 cut(s) 3, 210, 262, 509
ApeKI GCWGC 5 cut(s) 458, 866, 944, 986, 1052
ApoI RAATTY 2 cut(s) 573, 1157
Asp700I GAANNNNTTC 1 cut(s) 1010
AspLEI GCGC 1 cut(s) 183
AsuC2I CCSGG 1 cut(s) 860
AsuHPI GGTGA 1 cut(s) 350
AsuII TTCGAA 1 cut(s) 450
AvaI CYCGRG 1 cut(s) 1181
BaeI ACNNNNGTAYC 2 cut(s) 1169, 1202
BalI TGGCCA 2 cut(s) 5, 264
BanII GRGCYC 1 cut(s) 536
BbsI GAAGAC 1 cut(s) 416
Bbv12I GWGCWC 3 cut(s) 36, 536, 940
BbvI GCAGC 5 cut(s) 470, 853, 931, 973, 1039
BccI CCATC 1 cut(s) 1160
BceAI ACGGC 2 cut(s) 52, 833
BciT130I CCWGG 2 cut(s) 178, 783
BcnI CCSGG 1 cut(s) 860
BcoDI GTCTC 3 cut(s) 75, 816, 1134
BfaI CTAG 1 cut(s) 845
BfoI RGCGCY 1 cut(s) 184
BfuAI ACCTGC 1 cut(s) 436
BisI GCNGC 6 cut(s) 432, 459, 867, 945, 987, 1053
BlsI GCNGC 6 cut(s) 433, 460, 868, 946, 988, 1054
BmcAI AGTACT 1 cut(s) 1124
Bme1390I CCNGG 3 cut(s) 178, 783, 860
BmeT110I CYCGRG 1 cut(s) 1181
BmiI GGNNCC 4 cut(s) 307, 594, 712, 787
BmrFI CCNGG 3 cut(s) 178, 783, 860
BmrI ACTGGG 1 cut(s) 691
BmsI GCATC 6 cut(s) 213, 604, 619, 853, 878, 988
BmuI ACTGGG 1 cut(s) 691
BpiI GAAGAC 1 cut(s) 416
BpmI CTGGAG 2 cut(s) 423, 1011
Bpu14I TTCGAA 1 cut(s) 450
BpuEI CTTGAG 1 cut(s) 924
BpuMI CCSGG 1 cut(s) 860
BsaHI GRCGYC 1 cut(s) 952
BsaJI CCNNGG 3 cut(s) 781, 1056, 1095
BsaWI WCCGGW 2 cut(s) 536, 788
BsaXI ACNNNNNCTCC 2 cut(s) 815, 845
Bsc4I CCNNNNNNNGG 4 cut(s) 177, 782, 788, 1096
Bse1I ACTGG 4 cut(s) 213, 697, 770, 1199
Bse3DI GCAATG 1 cut(s) 657
BseAI TCCGGA 1 cut(s) 788
BseBI CCWGG 2 cut(s) 178, 783
BseDI CCNNGG 3 cut(s) 781, 1056, 1095
BseGI GGATG 2 cut(s) 17, 868
BseLI CCNNNNNNNGG 4 cut(s) 177, 782, 788, 1096
BseMI GCAATG 1 cut(s) 657
BseMII CTCAG 3 cut(s) 153, 399, 579
BseNI ACTGG 4 cut(s) 213, 697, 770, 1199
BseXI GCAGC 5 cut(s) 470, 853, 931, 973, 1039
BseYI CCCAGC 1 cut(s) 678
Bsh1236I CGCG 1 cut(s) 269
Bsh1285I CGRYCG 1 cut(s) 751
BshFI GGCC 4 cut(s) 5, 212, 264, 511
BsiEI CGRYCG 1 cut(s) 751
BsiHKAI GWGCWC 3 cut(s) 36, 536, 940
BsiHKCI CYCGRG 1 cut(s) 1181
BsiSI CCGG 6 cut(s) 309, 537, 714, 789, 860, 948
BslFI GGGAC 3 cut(s) 454, 678, 776
BslI CCNNNNNNNGG 4 cut(s) 177, 782, 788, 1096
BsmAI GTCTC 3 cut(s) 75, 816, 1134
BsmBI CGTCTC 1 cut(s) 75
BsmFI GGGAC 3 cut(s) 454, 678, 776
BsmI GAATGC 1 cut(s) 798
BsnI GGCC 4 cut(s) 5, 212, 264, 511
BsoBI CYCGRG 1 cut(s) 1181
Bsp119I TTCGAA 1 cut(s) 450
Bsp1286I GDGCHC 3 cut(s) 36, 536, 940
Bsp13I TCCGGA 1 cut(s) 788
Bsp143I GATC 2 cut(s) 347, 976
BspACI CCGC 6 cut(s) 65, 88, 218, 258, 269, 431
BspANI GGCC 4 cut(s) 5, 212, 264, 511
BspCNI CTCAG 3 cut(s) 152, 398, 580
BspEI TCCGGA 1 cut(s) 788
BspFNI CGCG 1 cut(s) 269
BspLI GGNNCC 4 cut(s) 307, 594, 712, 787
BspMI ACCTGC 1 cut(s) 436
BspPI GGATC 1 cut(s) 971
BspQI GCTCTTC 2 cut(s) 41, 524
BspT104I TTCGAA 1 cut(s) 450
BsrDI GCAATG 1 cut(s) 657
BsrI ACTGG 4 cut(s) 213, 697, 770, 1199
BssECI CCNNGG 3 cut(s) 781, 1056, 1095
BssMI GATC 2 cut(s) 347, 976
BssNI GRCGYC 1 cut(s) 952
BssT1I CCWWGG 1 cut(s) 1056
Bst2UI CCWGG 2 cut(s) 178, 783
Bst4CI ACNGT 4 cut(s) 325, 334, 415, 505
Bst6I CTCTTC 3 cut(s) 41, 524, 1113
BstACI GRCGYC 1 cut(s) 952
BstBI TTCGAA 1 cut(s) 450
BstC8I GCNNGC 2 cut(s) 899, 903
BstDEI CTNAG 3 cut(s) 139, 385, 588
BstENI CCTNNNNNAGG 1 cut(s) 1094
BstF5I GGATG 2 cut(s) 17, 868
BstFNI CGCG 1 cut(s) 269
BstH2I RGCGCY 1 cut(s) 184
BstHHI GCGC 1 cut(s) 183
BstKTI GATC 2 cut(s) 350, 979
BstMAI GTCTC 3 cut(s) 75, 816, 1134
BstMBI GATC 2 cut(s) 347, 976
BstMCI CGRYCG 1 cut(s) 751
BstMWI GCNNNNNNNGC 5 cut(s) 11, 524, 623, 944, 1007
BstNI CCWGG 2 cut(s) 178, 783
BstNSI RCATGY 2 cut(s) 706, 1030
BstSCI CCNGG 3 cut(s) 176, 781, 858
BstUI CGCG 1 cut(s) 269
BstV1I GCAGC 5 cut(s) 470, 853, 931, 973, 1039
BstV2I GAAGAC 1 cut(s) 416
BsuRI GGCC 4 cut(s) 5, 212, 264, 511
BtgZI GCGATG 1 cut(s) 627
BtsCI GGATG 2 cut(s) 17, 868
BtsI GCAGTG 2 cut(s) 571, 1212
BtsIMutI CAGTG 5 cut(s) 220, 420, 501, 571, 1212
BveI ACCTGC 1 cut(s) 436
Cac8I GCNNGC 2 cut(s) 899, 903
CaiI CAGNNNCTG 1 cut(s) 632
CfoI GCGC 1 cut(s) 183
CseI GACGC 1 cut(s) 960
Csp6I GTAC 3 cut(s) 655, 700, 1123
CspCI CAANNNNNGTGG 2 cut(s) 241, 276
CviAII CATG 5 cut(s) 602, 638, 703, 835, 1027
CviQI GTAC 3 cut(s) 655, 700, 1123
DdeI CTNAG 3 cut(s) 139, 385, 588
DpnI GATC 2 cut(s) 349, 978
DpnII GATC 2 cut(s) 347, 976
EaeI YGGCCR 2 cut(s) 3, 262
Eam1104I CTCTTC 3 cut(s) 41, 524, 1113
EarI CTCTTC 3 cut(s) 41, 524, 1113
EciI GGCGGA 1 cut(s) 54
Ecl136II GAGCTC 1 cut(s) 534
Eco130I CCWWGG 1 cut(s) 1056
Eco147I AGGCCT 1 cut(s) 511
Eco24I GRGCYC 1 cut(s) 536
Eco53kI GAGCTC 1 cut(s) 534
Eco57I CTGAAG 1 cut(s) 184
Eco88I CYCGRG 1 cut(s) 1181
EcoICRI GAGCTC 1 cut(s) 534
EcoNI CCTNNNNNAGG 1 cut(s) 1094
EcoRII CCWGG 2 cut(s) 176, 781
EcoT14I CCWWGG 1 cut(s) 1056
EcoT38I GRGCYC 1 cut(s) 536
ErhI CCWWGG 1 cut(s) 1056
Esp3I CGTCTC 1 cut(s) 75
FaeI CATG 5 cut(s) 605, 641, 706, 838, 1030
FaiI YATR 9 cut(s) 579, 603, 639, 704, 836, 965, 975, 1028, 1038
FalI AAGNNNNNCTT 2 cut(s) 995, 1027
FaqI GGGAC 3 cut(s) 454, 678, 776
FatI CATG 5 cut(s) 601, 637, 702, 834, 1026
FauI CCCGC 1 cut(s) 95
Fnu4HI GCNGC 6 cut(s) 432, 459, 867, 945, 987, 1053
FokI GGATG 2 cut(s) 4, 875
FriOI GRGCYC 1 cut(s) 536
Fsp4HI GCNGC 6 cut(s) 432, 459, 867, 945, 987, 1053
FspBI CTAG 1 cut(s) 845
GlaI GCGC 1 cut(s) 182
GluI GCNGC 6 cut(s) 432, 459, 867, 945, 987, 1053
GsaI CCCAGC 1 cut(s) 682
GsuI CTGGAG 2 cut(s) 423, 1011
HaeII RGCGCY 1 cut(s) 184
HaeIII GGCC 4 cut(s) 5, 212, 264, 511
HapII CCGG 6 cut(s) 309, 537, 714, 789, 860, 948
HgaI GACGC 1 cut(s) 960
HhaI GCGC 1 cut(s) 183
Hin1I GRCGYC 1 cut(s) 952
Hin1II CATG 5 cut(s) 605, 641, 706, 838, 1030
Hin6I GCGC 1 cut(s) 181
HinP1I GCGC 1 cut(s) 181
HincII GTYRAC 1 cut(s) 247
HindII GTYRAC 1 cut(s) 247
HinfI GANTC 4 cut(s) 279, 381, 910, 1184
HpaII CCGG 6 cut(s) 309, 537, 714, 789, 860, 948
HphI GGTGA 1 cut(s) 350
Hpy166II GTNNAC 2 cut(s) 247, 1080
Hpy188I TCNGA 3 cut(s) 278, 352, 388
Hpy188III TCNNGA 5 cut(s) 238, 328, 789, 821, 914
Hpy8I GTNNAC 2 cut(s) 247, 1080
Hpy99I CGWCG 1 cut(s) 920
HpyAV CCTTC 6 cut(s) 31, 208, 446, 602, 1021, 1099
HpyCH4III ACNGT 4 cut(s) 325, 334, 415, 505
HpyCH4IV ACGT 1 cut(s) 816
HpyCH4V TGCA 7 cut(s) 644, 662, 796, 869, 1001, 1030, 1040
HpyF10VI GCNNNNNNNGC 5 cut(s) 11, 524, 623, 944, 1007
HpyF3I CTNAG 3 cut(s) 139, 385, 588
HpySE526I ACGT 1 cut(s) 816
Hsp92I GRCGYC 1 cut(s) 952
Hsp92II CATG 5 cut(s) 605, 641, 706, 838, 1030
HspAI GCGC 1 cut(s) 181
Kpn2I TCCGGA 1 cut(s) 788
Kzo9I GATC 2 cut(s) 347, 976
LguI GCTCTTC 2 cut(s) 41, 524
LmnI GCTCC 6 cut(s) 188, 455, 539, 592, 716, 1108
Lsp1109I GCAGC 5 cut(s) 470, 853, 931, 973, 1039
LweI GCATC 6 cut(s) 213, 604, 619, 853, 878, 988
MaeI CTAG 1 cut(s) 845
MaeII ACGT 1 cut(s) 816
MaeIII GTNAC 4 cut(s) 319, 875, 907, 1022
MalI GATC 2 cut(s) 349, 978
MboI GATC 2 cut(s) 347, 976
MfeI CAATTG 1 cut(s) 435
MhlI GDGCHC 3 cut(s) 36, 536, 940
MlsI TGGCCA 2 cut(s) 5, 264
MluCI AATT 7 cut(s) 390, 435, 548, 573, 684, 753, 1157
MluNI TGGCCA 2 cut(s) 5, 264
MlyI GAGTC 2 cut(s) 904, 1193
MmeI TCCRAC 4 cut(s) 78, 210, 456, 1052
Mox20I TGGCCA 2 cut(s) 5, 264
MroI TCCGGA 1 cut(s) 788
MroXI GAANNNNTTC 1 cut(s) 1010
MscI TGGCCA 2 cut(s) 5, 264
MseI TTAA 2 cut(s) 621, 1191
MslI CAYNNNNRTG 1 cut(s) 1035
Msp20I TGGCCA 2 cut(s) 5, 264
MspA1I CMGCKG 1 cut(s) 258
MspI CCGG 6 cut(s) 309, 537, 714, 789, 860, 948
MspR9I CCNGG 3 cut(s) 178, 783, 860
MunI CAATTG 1 cut(s) 435
Mva1269I GAATGC 1 cut(s) 798
MvaI CCWGG 2 cut(s) 178, 783
MvnI CGCG 1 cut(s) 269
MwoI GCNNNNNNNGC 5 cut(s) 11, 524, 623, 944, 1007
NciI CCSGG 1 cut(s) 860
NdeII GATC 2 cut(s) 347, 976
NlaIII CATG 5 cut(s) 605, 641, 706, 838, 1030
NlaIV GGNNCC 4 cut(s) 307, 594, 712, 787
NmeAIII GCCGAG 1 cut(s) 1120
NmuCI GTSAC 2 cut(s) 319, 907
NspI RCATGY 2 cut(s) 706, 1030
NspV TTCGAA 1 cut(s) 450
PaeR7I CTCGAG 1 cut(s) 1181
PceI AGGCCT 1 cut(s) 511
PciI ACATGT 1 cut(s) 702
PciSI GCTCTTC 2 cut(s) 41, 524
PctI GAATGC 1 cut(s) 798
PdmI GAANNNNTTC 1 cut(s) 1010
PfeI GAWTC 2 cut(s) 279, 381
PflMI CCANNNNNTGG 1 cut(s) 782
PkrI GCNGC 6 cut(s) 433, 460, 868, 946, 988, 1054
PleI GAGTC 2 cut(s) 904, 1192
PpsI GAGTC 2 cut(s) 904, 1192
PscI ACATGT 1 cut(s) 702
PsiI TTATAA 1 cut(s) 579
Psp124BI GAGCTC 1 cut(s) 536
Psp6I CCWGG 2 cut(s) 176, 781
PspFI CCCAGC 1 cut(s) 678
PspGI CCWGG 2 cut(s) 176, 781
PspN4I GGNNCC 4 cut(s) 307, 594, 712, 787
PspXI VCTCGAGB 1 cut(s) 1181
PstNI CAGNNNCTG 1 cut(s) 632
RsaI GTAC 3 cut(s) 656, 701, 1124
RsaNI GTAC 3 cut(s) 655, 700, 1123
RseI CAYNNNNRTG 1 cut(s) 1035
SacI GAGCTC 1 cut(s) 536
SapI GCTCTTC 2 cut(s) 41, 524
SaqAI TTAA 2 cut(s) 621, 1191
SatI GCNGC 6 cut(s) 432, 459, 867, 945, 987, 1053
Sau3AI GATC 2 cut(s) 347, 976
ScaI AGTACT 1 cut(s) 1124
SchI GAGTC 2 cut(s) 904, 1193
ScrFI CCNGG 3 cut(s) 178, 783, 860
SduI GDGCHC 3 cut(s) 36, 536, 940
SfaNI GCATC 6 cut(s) 213, 604, 619, 853, 878, 988
Sfr274I CTCGAG 1 cut(s) 1181
SfuI TTCGAA 1 cut(s) 450
SlaI CTCGAG 1 cut(s) 1181
SmiMI CAYNNNNRTG 1 cut(s) 1035
SmlI CTYRAG 2 cut(s) 939, 1181
SmoI CTYRAG 2 cut(s) 939, 1181
Sse9I AATT 7 cut(s) 390, 435, 548, 573, 684, 753, 1157
SseBI AGGCCT 1 cut(s) 511
SsiI CCGC 6 cut(s) 65, 88, 218, 258, 269, 431
SspMI CTAG 1 cut(s) 845
SstI GAGCTC 1 cut(s) 536
StuI AGGCCT 1 cut(s) 511
StyD4I CCNGG 3 cut(s) 176, 781, 858
StyI CCWWGG 1 cut(s) 1056
TaaI ACNGT 4 cut(s) 325, 334, 415, 505
TaiI ACGT 1 cut(s) 819
TaqI TCGA 5 cut(s) 450, 747, 820, 915, 1182
TaqII GACCGA 1 cut(s) 765
TasI AATT 7 cut(s) 390, 435, 548, 573, 684, 753, 1157
TatI WGTACW 3 cut(s) 654, 699, 1122
TauI GCSGC 1 cut(s) 434
TfiI GAWTC 2 cut(s) 279, 381
Tru1I TTAA 2 cut(s) 621, 1191
Tru9I TTAA 2 cut(s) 621, 1191
TscAI CASTG 5 cut(s) 220, 420, 508, 571, 1212
TseFI GTSAC 2 cut(s) 319, 907
TseI GCWGC 5 cut(s) 458, 866, 944, 986, 1052
Tsp45I GTSAC 2 cut(s) 319, 907
TspDTI ATGAA 3 cut(s) 6, 374, 547
TspGWI ACGGA 3 cut(s) 680, 933, 1010
TspRI CASTG 5 cut(s) 220, 420, 508, 571, 1212
Van91I CCANNNNNTGG 1 cut(s) 782
XagI CCTNNNNNAGG 1 cut(s) 1094
XapI RAATTY 2 cut(s) 573, 1157
XceI RCATGY 2 cut(s) 706, 1030
XcmI CCANNNNNNNNNTGG 1 cut(s) 1063
XhoI CTCGAG 1 cut(s) 1181
XmnI GAANNNNTTC 1 cut(s) 1010
XspI CTAG 1 cut(s) 845
ZrmI AGTACT 1 cut(s) 1124
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.