Chloroplast stem-loop binding protein of 41 kDa a
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G63140 |
| fragaria_vesca | FvH4_2g23570 |
| malus_domestica | MD11G1285100.v1.1 |
| prunus_persica | Prupe.8G241000_v2.0.a1 |
| pyrus_communis | pycom11g25270 |
| rosa_chinensis | RchiOBHm_Chr6g0291041 |
| rosa_laevigata | RLG00000012152 |
| rosa_multiflora | Rmu_sc0004642.1_g000002 |
| rosa_roxburghii | Rroxscaffold_7G00176430 |
| rosa_rugosa | Rorug06G0217200 |
| rosa_samantha | Rh6AG327200 Rh6BG334700 Rh6CG340900 |
| rosa_wichuraiana | Rw6G028460 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 436 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 782 |
| AccI | GTMKAC | 1 cut(s) | 44 |
| AccIII | TCCGGA | 2 cut(s) | 788, 1020 |
| AciI | CCGC | 1 cut(s) | 431 |
| AclWI | GGATC | 2 cut(s) | 313, 971 |
| AcoI | YGGCCR | 2 cut(s) | 3, 310 |
| AcsI | RAATTY | 3 cut(s) | 573, 753, 1157 |
| AcuI | CTGAAG | 1 cut(s) | 184 |
| AcyI | GRCGYC | 1 cut(s) | 952 |
| AdeI | CACNNNGTG | 1 cut(s) | 271 |
| AfaI | GTAC | 3 cut(s) | 557, 656, 1124 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 782, 788, 819, 820 |
| AflIII | ACRYGT | 1 cut(s) | 702 |
| AgsI | TTSAA | 5 cut(s) | 187, 608, 886, 1105, 1118 |
| AjnI | CCWGG | 2 cut(s) | 176, 781 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 769, 801 |
| AluBI | AGCT | 6 cut(s) | 298, 348, 626, 944, 1010, 1052 |
| AluI | AGCT | 6 cut(s) | 298, 348, 626, 944, 1010, 1052 |
| Alw21I | GWGCWC | 3 cut(s) | 36, 350, 940 |
| Alw26I | GTCTC | 2 cut(s) | 1134, 1191 |
| AlwI | GGATC | 2 cut(s) | 313, 971 |
| Aor13HI | TCCGGA | 2 cut(s) | 788, 1020 |
| AoxI | GGCC | 4 cut(s) | 3, 310, 509, 525 |
| ApeKI | GCWGC | 4 cut(s) | 866, 944, 986, 1052 |
| ApoI | RAATTY | 3 cut(s) | 573, 753, 1157 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 548 |
| AspLEI | GCGC | 1 cut(s) | 183 |
| AspS9I | GGNCC | 2 cut(s) | 235, 525 |
| AsuHPI | GGTGA | 3 cut(s) | 313, 350, 1084 |
| AvaII | GGWCC | 1 cut(s) | 235 |
| BaeGI | GKGCMC | 1 cut(s) | 267 |
| BalI | TGGCCA | 2 cut(s) | 5, 312 |
| BanII | GRGCYC | 1 cut(s) | 350 |
| BbsI | GAAGAC | 2 cut(s) | 416, 1104 |
| Bbv12I | GWGCWC | 3 cut(s) | 36, 350, 940 |
| BbvI | GCAGC | 4 cut(s) | 853, 931, 973, 1039 |
| BccI | CCATC | 4 cut(s) | 321, 911, 1065, 1160 |
| BceAI | ACGGC | 1 cut(s) | 833 |
| BciT130I | CCWGG | 2 cut(s) | 178, 783 |
| BcoDI | GTCTC | 2 cut(s) | 1134, 1191 |
| BfaI | CTAG | 4 cut(s) | 633, 845, 873, 1067 |
| BfoI | RGCGCY | 1 cut(s) | 184 |
| BfuAI | ACCTGC | 1 cut(s) | 436 |
| BisI | GCNGC | 4 cut(s) | 867, 945, 987, 1053 |
| BlsI | GCNGC | 4 cut(s) | 868, 946, 988, 1054 |
| BmcAI | AGTACT | 1 cut(s) | 1124 |
| Bme1390I | CCNGG | 2 cut(s) | 178, 783 |
| Bme18I | GGWCC | 1 cut(s) | 235 |
| BmgT120I | GGNCC | 2 cut(s) | 235, 525 |
| BmiI | GGNNCC | 3 cut(s) | 594, 712, 787 |
| BmrFI | CCNGG | 2 cut(s) | 178, 783 |
| BmsI | GCATC | 3 cut(s) | 619, 878, 988 |
| BpiI | GAAGAC | 2 cut(s) | 416, 1104 |
| BpmI | CTGGAG | 2 cut(s) | 240, 1011 |
| BpuEI | CTTGAG | 1 cut(s) | 924 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1075 |
| BsaHI | GRCGYC | 1 cut(s) | 952 |
| BsaJI | CCNNGG | 2 cut(s) | 781, 1056 |
| BsaWI | WCCGGW | 2 cut(s) | 788, 1020 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 782, 788, 819, 820 |
| Bse1I | ACTGG | 2 cut(s) | 770, 1199 |
| Bse3DI | GCAATG | 1 cut(s) | 657 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1075 |
| BseAI | TCCGGA | 2 cut(s) | 788, 1020 |
| BseBI | CCWGG | 2 cut(s) | 178, 783 |
| BseDI | CCNNGG | 2 cut(s) | 781, 1056 |
| BseGI | GGATG | 3 cut(s) | 23, 619, 1076 |
| BseJI | GATNNNNATC | 1 cut(s) | 1075 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 782, 788, 819, 820 |
| BseMI | GCAATG | 1 cut(s) | 657 |
| BseMII | CTCAG | 3 cut(s) | 363, 399, 579 |
| BseNI | ACTGG | 2 cut(s) | 770, 1199 |
| BseRI | GAGGAG | 6 cut(s) | 91, 94, 97, 118, 605, 749 |
| BseSI | GKGCMC | 1 cut(s) | 267 |
| BseXI | GCAGC | 4 cut(s) | 853, 931, 973, 1039 |
| BseYI | CCCAGC | 1 cut(s) | 401 |
| Bsh1285I | CGRYCG | 1 cut(s) | 751 |
| BshFI | GGCC | 4 cut(s) | 5, 312, 511, 527 |
| BsiEI | CGRYCG | 1 cut(s) | 751 |
| BsiHKAI | GWGCWC | 3 cut(s) | 36, 350, 940 |
| BsiSI | CCGG | 3 cut(s) | 714, 789, 1021 |
| BslFI | GGGAC | 2 cut(s) | 776, 836 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 782, 788, 819, 820 |
| BsmAI | GTCTC | 2 cut(s) | 1134, 1191 |
| BsmFI | GGGAC | 2 cut(s) | 776, 836 |
| BsnI | GGCC | 4 cut(s) | 5, 312, 511, 527 |
| Bsp1286I | GDGCHC | 4 cut(s) | 36, 267, 350, 940 |
| Bsp13I | TCCGGA | 2 cut(s) | 788, 1020 |
| Bsp1407I | TGTACA | 1 cut(s) | 555 |
| Bsp143I | GATC | 5 cut(s) | 305, 748, 898, 976, 1131 |
| BspACI | CCGC | 1 cut(s) | 431 |
| BspANI | GGCC | 4 cut(s) | 5, 312, 511, 527 |
| BspCNI | CTCAG | 3 cut(s) | 362, 398, 580 |
| BspEI | TCCGGA | 2 cut(s) | 788, 1020 |
| BspLI | GGNNCC | 3 cut(s) | 594, 712, 787 |
| BspMI | ACCTGC | 1 cut(s) | 436 |
| BspPI | GGATC | 2 cut(s) | 313, 971 |
| BsrDI | GCAATG | 1 cut(s) | 657 |
| BsrGI | TGTACA | 1 cut(s) | 555 |
| BsrI | ACTGG | 2 cut(s) | 770, 1199 |
| BssECI | CCNNGG | 2 cut(s) | 781, 1056 |
| BssMI | GATC | 5 cut(s) | 305, 748, 898, 976, 1131 |
| BssNI | GRCGYC | 1 cut(s) | 952 |
| BssT1I | CCWWGG | 1 cut(s) | 1056 |
| Bst2UI | CCWGG | 2 cut(s) | 178, 783 |
| Bst4CI | ACNGT | 6 cut(s) | 191, 325, 334, 415, 505, 890 |
| Bst6I | CTCTTC | 3 cut(s) | 136, 336, 1113 |
| BstACI | GRCGYC | 1 cut(s) | 952 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 167 |
| BstAUI | TGTACA | 1 cut(s) | 555 |
| BstC8I | GCNNGC | 1 cut(s) | 267 |
| BstDEI | CTNAG | 3 cut(s) | 349, 385, 588 |
| BstF5I | GGATG | 3 cut(s) | 23, 619, 1076 |
| BstH2I | RGCGCY | 1 cut(s) | 184 |
| BstHHI | GCGC | 1 cut(s) | 183 |
| BstKTI | GATC | 5 cut(s) | 308, 751, 901, 979, 1134 |
| BstMAI | GTCTC | 2 cut(s) | 1134, 1191 |
| BstMBI | GATC | 5 cut(s) | 305, 748, 898, 976, 1131 |
| BstMCI | CGRYCG | 1 cut(s) | 751 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 167, 524, 944, 1007 |
| BstNI | CCWGG | 2 cut(s) | 178, 783 |
| BstNSI | RCATGY | 2 cut(s) | 706, 1030 |
| BstSCI | CCNGG | 2 cut(s) | 176, 781 |
| BstSLI | GKGCMC | 1 cut(s) | 267 |
| BstV1I | GCAGC | 4 cut(s) | 853, 931, 973, 1039 |
| BstV2I | GAAGAC | 2 cut(s) | 416, 1104 |
| BstX2I | RGATCY | 1 cut(s) | 305 |
| BstYI | RGATCY | 1 cut(s) | 305 |
| BsuRI | GGCC | 4 cut(s) | 5, 312, 511, 527 |
| BtsCI | GGATG | 3 cut(s) | 23, 619, 1076 |
| BtsI | GCAGTG | 3 cut(s) | 276, 571, 1212 |
| BtsIMutI | CAGTG | 5 cut(s) | 276, 420, 501, 571, 1212 |
| BveI | ACCTGC | 1 cut(s) | 436 |
| Cac8I | GCNNGC | 1 cut(s) | 267 |
| CfoI | GCGC | 1 cut(s) | 183 |
| Cfr13I | GGNCC | 2 cut(s) | 235, 525 |
| CseI | GACGC | 2 cut(s) | 872, 960 |
| Csp6I | GTAC | 3 cut(s) | 556, 655, 1123 |
| CviAII | CATG | 5 cut(s) | 602, 638, 703, 815, 1027 |
| CviQI | GTAC | 3 cut(s) | 556, 655, 1123 |
| DdeI | CTNAG | 3 cut(s) | 349, 385, 588 |
| DpnI | GATC | 5 cut(s) | 307, 750, 900, 978, 1133 |
| DpnII | GATC | 5 cut(s) | 305, 748, 898, 976, 1131 |
| DraIII | CACNNNGTG | 1 cut(s) | 271 |
| EaeI | YGGCCR | 2 cut(s) | 3, 310 |
| Eam1104I | CTCTTC | 3 cut(s) | 136, 336, 1113 |
| EarI | CTCTTC | 3 cut(s) | 136, 336, 1113 |
| Ecl136II | GAGCTC | 1 cut(s) | 348 |
| Eco130I | CCWWGG | 1 cut(s) | 1056 |
| Eco147I | AGGCCT | 1 cut(s) | 511 |
| Eco24I | GRGCYC | 1 cut(s) | 350 |
| Eco47I | GGWCC | 1 cut(s) | 235 |
| Eco53kI | GAGCTC | 1 cut(s) | 348 |
| Eco57I | CTGAAG | 1 cut(s) | 184 |
| EcoICRI | GAGCTC | 1 cut(s) | 348 |
| EcoO109I | RGGNCCY | 1 cut(s) | 235 |
| EcoRII | CCWGG | 2 cut(s) | 176, 781 |
| EcoT14I | CCWWGG | 1 cut(s) | 1056 |
| EcoT38I | GRGCYC | 1 cut(s) | 350 |
| ErhI | CCWWGG | 1 cut(s) | 1056 |
| FaeI | CATG | 5 cut(s) | 605, 641, 706, 818, 1030 |
| FaqI | GGGAC | 2 cut(s) | 776, 836 |
| FatI | CATG | 5 cut(s) | 601, 637, 702, 814, 1026 |
| FblI | GTMKAC | 1 cut(s) | 44 |
| Fnu4HI | GCNGC | 4 cut(s) | 867, 945, 987, 1053 |
| FokI | GGATG | 3 cut(s) | 10, 626, 1083 |
| FriOI | GRGCYC | 1 cut(s) | 350 |
| Fsp4HI | GCNGC | 4 cut(s) | 867, 945, 987, 1053 |
| FspBI | CTAG | 4 cut(s) | 633, 845, 873, 1067 |
| GlaI | GCGC | 1 cut(s) | 182 |
| GluI | GCNGC | 4 cut(s) | 867, 945, 987, 1053 |
| GsaI | CCCAGC | 1 cut(s) | 405 |
| GsuI | CTGGAG | 2 cut(s) | 240, 1011 |
| HaeII | RGCGCY | 1 cut(s) | 184 |
| HaeIII | GGCC | 4 cut(s) | 5, 312, 511, 527 |
| HapII | CCGG | 3 cut(s) | 714, 789, 1021 |
| HgaI | GACGC | 2 cut(s) | 872, 960 |
| HhaI | GCGC | 1 cut(s) | 183 |
| Hin1I | GRCGYC | 1 cut(s) | 952 |
| Hin1II | CATG | 5 cut(s) | 605, 641, 706, 818, 1030 |
| Hin6I | GCGC | 1 cut(s) | 181 |
| HinP1I | GCGC | 1 cut(s) | 181 |
| HincII | GTYRAC | 1 cut(s) | 961 |
| HindII | GTYRAC | 1 cut(s) | 961 |
| HindIII | AAGCTT | 1 cut(s) | 1008 |
| HinfI | GANTC | 3 cut(s) | 279, 381, 1184 |
| HpaI | GTTAAC | 1 cut(s) | 961 |
| HpaII | CCGG | 3 cut(s) | 714, 789, 1021 |
| HphI | GGTGA | 3 cut(s) | 313, 350, 1084 |
| Hpy166II | GTNNAC | 2 cut(s) | 45, 961 |
| Hpy188I | TCNGA | 2 cut(s) | 352, 388 |
| Hpy188III | TCNNGA | 4 cut(s) | 238, 789, 1021, 1135 |
| Hpy8I | GTNNAC | 2 cut(s) | 45, 961 |
| Hpy99I | CGWCG | 1 cut(s) | 866 |
| HpyAV | CCTTC | 5 cut(s) | 78, 208, 446, 602, 1099 |
| HpyCH4III | ACNGT | 6 cut(s) | 191, 325, 334, 415, 505, 890 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 167, 524, 944, 1007 |
| HpyF3I | CTNAG | 3 cut(s) | 349, 385, 588 |
| Hsp92I | GRCGYC | 1 cut(s) | 952 |
| Hsp92II | CATG | 5 cut(s) | 605, 641, 706, 818, 1030 |
| HspAI | GCGC | 1 cut(s) | 181 |
| Kpn2I | TCCGGA | 2 cut(s) | 788, 1020 |
| KspAI | GTTAAC | 1 cut(s) | 961 |
| Kzo9I | GATC | 5 cut(s) | 305, 748, 898, 976, 1131 |
| LmnI | GCTCC | 2 cut(s) | 592, 1108 |
| Lsp1109I | GCAGC | 4 cut(s) | 853, 931, 973, 1039 |
| LweI | GCATC | 3 cut(s) | 619, 878, 988 |
| MaeI | CTAG | 4 cut(s) | 633, 845, 873, 1067 |
| MaeIII | GTNAC | 3 cut(s) | 319, 875, 907 |
| MalI | GATC | 5 cut(s) | 307, 750, 900, 978, 1133 |
| MboI | GATC | 5 cut(s) | 305, 748, 898, 976, 1131 |
| MflI | RGATCY | 1 cut(s) | 305 |
| MhlI | GDGCHC | 4 cut(s) | 36, 267, 350, 940 |
| MlsI | TGGCCA | 2 cut(s) | 5, 312 |
| MluCI | AATT | 7 cut(s) | 171, 390, 548, 573, 753, 1157, 1179 |
| MluNI | TGGCCA | 2 cut(s) | 5, 312 |
| MlyI | GAGTC | 1 cut(s) | 1193 |
| MmeI | TCCRAC | 2 cut(s) | 78, 456 |
| Mox20I | TGGCCA | 2 cut(s) | 5, 312 |
| MroI | TCCGGA | 2 cut(s) | 788, 1020 |
| MroXI | GAANNNNTTC | 1 cut(s) | 548 |
| MscI | TGGCCA | 2 cut(s) | 5, 312 |
| MseI | TTAA | 4 cut(s) | 621, 960, 1127, 1191 |
| MslI | CAYNNNNRTG | 1 cut(s) | 1035 |
| Msp20I | TGGCCA | 2 cut(s) | 5, 312 |
| MspI | CCGG | 3 cut(s) | 714, 789, 1021 |
| MspR9I | CCNGG | 2 cut(s) | 178, 783 |
| MvaI | CCWGG | 2 cut(s) | 178, 783 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 167, 524, 944, 1007 |
| NdeII | GATC | 5 cut(s) | 305, 748, 898, 976, 1131 |
| NlaIII | CATG | 5 cut(s) | 605, 641, 706, 818, 1030 |
| NlaIV | GGNNCC | 3 cut(s) | 594, 712, 787 |
| NmuCI | GTSAC | 2 cut(s) | 319, 907 |
| NspI | RCATGY | 2 cut(s) | 706, 1030 |
| PceI | AGGCCT | 1 cut(s) | 511 |
| PciI | ACATGT | 1 cut(s) | 702 |
| PdmI | GAANNNNTTC | 1 cut(s) | 548 |
| PfeI | GAWTC | 2 cut(s) | 279, 381 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 782 |
| PkrI | GCNGC | 4 cut(s) | 868, 946, 988, 1054 |
| Ple19I | CGATCG | 1 cut(s) | 751 |
| PleI | GAGTC | 1 cut(s) | 1192 |
| PpsI | GAGTC | 1 cut(s) | 1192 |
| PpuMI | RGGWCCY | 1 cut(s) | 235 |
| PscI | ACATGT | 1 cut(s) | 702 |
| Psp124BI | GAGCTC | 1 cut(s) | 350 |
| Psp5II | RGGWCCY | 1 cut(s) | 235 |
| Psp6I | CCWGG | 2 cut(s) | 176, 781 |
| PspFI | CCCAGC | 1 cut(s) | 401 |
| PspGI | CCWGG | 2 cut(s) | 176, 781 |
| PspN4I | GGNNCC | 3 cut(s) | 594, 712, 787 |
| PspPI | GGNCC | 2 cut(s) | 235, 525 |
| PspPPI | RGGWCCY | 1 cut(s) | 235 |
| PsuI | RGATCY | 1 cut(s) | 305 |
| PvuI | CGATCG | 1 cut(s) | 751 |
| RsaI | GTAC | 3 cut(s) | 557, 656, 1124 |
| RsaNI | GTAC | 3 cut(s) | 556, 655, 1123 |
| RseI | CAYNNNNRTG | 1 cut(s) | 1035 |
| SacI | GAGCTC | 1 cut(s) | 350 |
| SaqAI | TTAA | 4 cut(s) | 621, 960, 1127, 1191 |
| SatI | GCNGC | 4 cut(s) | 867, 945, 987, 1053 |
| Sau3AI | GATC | 5 cut(s) | 305, 748, 898, 976, 1131 |
| Sau96I | GGNCC | 2 cut(s) | 235, 525 |
| ScaI | AGTACT | 1 cut(s) | 1124 |
| SchI | GAGTC | 1 cut(s) | 1193 |
| ScrFI | CCNGG | 2 cut(s) | 178, 783 |
| SduI | GDGCHC | 4 cut(s) | 36, 267, 350, 940 |
| SfaNI | GCATC | 3 cut(s) | 619, 878, 988 |
| SinI | GGWCC | 1 cut(s) | 235 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 1035 |
| SmlI | CTYRAG | 1 cut(s) | 939 |
| SmoI | CTYRAG | 1 cut(s) | 939 |
| Sse9I | AATT | 7 cut(s) | 171, 390, 548, 573, 753, 1157, 1179 |
| SseBI | AGGCCT | 1 cut(s) | 511 |
| SsiI | CCGC | 1 cut(s) | 431 |
| SspI | AATATT | 1 cut(s) | 687 |
| SspMI | CTAG | 4 cut(s) | 633, 845, 873, 1067 |
| SstI | GAGCTC | 1 cut(s) | 350 |
| StuI | AGGCCT | 1 cut(s) | 511 |
| StyD4I | CCNGG | 2 cut(s) | 176, 781 |
| StyI | CCWWGG | 1 cut(s) | 1056 |
| TaaI | ACNGT | 6 cut(s) | 191, 325, 334, 415, 505, 890 |
| TaqI | TCGA | 3 cut(s) | 747, 751, 915 |
| TasI | AATT | 7 cut(s) | 171, 390, 548, 573, 753, 1157, 1179 |
| TatI | WGTACW | 3 cut(s) | 555, 654, 1122 |
| TfiI | GAWTC | 2 cut(s) | 279, 381 |
| Tru1I | TTAA | 4 cut(s) | 621, 960, 1127, 1191 |
| Tru9I | TTAA | 4 cut(s) | 621, 960, 1127, 1191 |
| TscAI | CASTG | 5 cut(s) | 276, 420, 508, 571, 1212 |
| TseFI | GTSAC | 2 cut(s) | 319, 907 |
| TseI | GCWGC | 4 cut(s) | 866, 944, 986, 1052 |
| Tsp45I | GTSAC | 2 cut(s) | 319, 907 |
| TspDTI | ATGAA | 2 cut(s) | 6, 374 |
| TspRI | CASTG | 5 cut(s) | 276, 420, 508, 571, 1212 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 782 |
| VpaK11BI | GGWCC | 1 cut(s) | 235 |
| XapI | RAATTY | 3 cut(s) | 573, 753, 1157 |
| XceI | RCATGY | 2 cut(s) | 706, 1030 |
| XmiI | GTMKAC | 1 cut(s) | 44 |
| XmnI | GAANNNNTTC | 1 cut(s) | 548 |
| XspI | CTAG | 4 cut(s) | 633, 845, 873, 1067 |
| ZrmI | AGTACT | 1 cut(s) | 1124 |