Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr11

Orthogroup ID

OG0010528

Physical Location & Seq

Genomic Coordinates Forward (+)

41253547 .. 41255976

Gene Structure 2430 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD11G1293000.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1728 bp

ATGACGGACGACGAGCTGCTAACCAAACTCGATGACTCCACCAGAAGCGCCGCGCTACACCAGATCGACGCCCTCCGCTCCATCCTCGACCAGAACGGCTCCGTCGCCTATCTCCAGCCTTACCTCTCTCCCCAGGATACGCCGCCGGACGCCGCCGCATTCCGTCGCTCCGTGCCGCTGTCTACCTACGACGACTACGCCGAATTCATCAATCAAATGGCCGACACTCCACATATTCATCGTCAACAGCCTCTCCTCTCAGTCGATCCACTGCTCTGCTTCTTCTACAGCTCCGGGACAAGCTCACCGAGGCCAAAGTTGATACCTTACTTCGATTCCAAACTCTCCAAAGCCGCCTCCTTTATAGCTCACCAGGGCAGTTCTGCAATTCTCAGAAGGCTGTTTCCTCCGAGGCCCTCAGTGAATAAGATAATGTGGTTTATATATGCCGATAATGTGACAACTACACGAGGTGGTTTTAAGGTTATGGCTGCTTCGACATACCCTTTGCAGAGTGGCAATGCAAATTGGTCTCAGCTTAGCTTTATTTCGAGTCCCCCGGAAGTCATTCTCGGGTCGAATGTTGAGCACCAGATGTATTGCCATCTCCTTTGTGGCCTCAGGAACTGTGATTCAATCGATGCAATTCGAGCCCCTTATGCAATAGGCTTGATCAAAGTGTTTCGCCTCCTTGAGTCCAAGTGGGAGCAGATGTGTAATGACCTTGAACACGGGATCCCGAGTTTGGAGATTGCTGATGTTGCAATGAGGGATTCTGTTGTTGATGTCCTTGGTGGGCCTCAACCGGACTTGGCAAAGAGACTTCGGACAGTTTTTGAGGGGAAGAGTTGGAGTGGGATTGTGAGCAAGTTGTGGCCAAATGCTCGTTATGTTAAGTGTGTTGCTACTGGAAGTATGCAGCAGTATTATCCAAAACTTAAGCAATATGCAGGAGAGATACCTCTGTTAGGTGGAGACTACTTCGCTTCGGAATGCTGTGTGGGTATCAACTTGGATATTACGCAACCCCCTGAGAAAACTAAATTTGTTTTGCTTCCAACTGCCGCCTATTTTGAGTTTCTTCCATTCGATATGAACGAGACTAATGATGCCGGTACAGAAACGGTCGATGTTTCTGGTGTTGAGGTGGGGAAGATGTATCAAGTGGTTGTTACTACTTACAGAGGATTTTACCGGTACCATTTGGGTGATATAGTGAGAGTTGTTGGTTTTTATAATTTGTCTCCAGAAGTTGAATTTGTGATGAGAGCACCCAAAGGCCCAGGTGAGATTATAACCGAGAAGGACTTGATGTGTGCAATGCAAGGTTTCCAGCTTATGCTTGAAAATGCAATGGCAATGGAGATTACTGAGTTTGCAAGTTTTTTAGATACTGAGTTGAGCCCAAAACAGTTGAAGGTATTTGCAGAAGTTGGAGAGGGATGCATGTTGTTTACACAGGAGAAGATAGAGGACTCGCTTGTAGTTCTTAGGAGGTGTTGTTCCTCCATCGAGGATGGTTTGGGAAGCATTTACAAGGTGCAGAGAGATAGAGGTGAAGCAGGCCCTTTGCTGTTATATGTTGTAAAGTCCGGTAGCTTTAACAGACTATCACAGGTAGCCATCCGGAATGGAGCACCAGCTAGTCAATATAAACCACCCAAGATCATAAGAAATAGTGAAATTGTTCGGTTGCTTGAAGAATCTTCTCTTATTACGATTACCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0008150 GO:0009314 GO:0009416 GO:0009628 GO:0009719 GO:0009725 GO:0009733 GO:0010033 GO:0042221 GO:0050896

KEGG Pathways

Metabolic & Signaling

ko04075 map04075

Pfam Domains

Protein Families

DUF295 GH3

Protein Analysis

576

Amino Acids

64.08

Weight (kDa)

5.48

Isoelectric Point (pI)

46.43

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
GH3	PF03321	7 - 322	2.2e-79	GH3 family N-terminal domain
GH3_M	PF23571	349 - 423	4.8e-26	GH3 family central domain
GH3_C	PF23572	436 - 560	1.4e-17	GH3 family C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010528)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_2g24250 FvH4_2g24250 FvH4_2g24250
malus_domestica	MD11G1293000.v1.1
prunus_persica	Prupe.8G248400_v2.0.a1
pyrus_communis	pycom11g25930
rosa_chinensis	RchiOBHm_Chr6g0292061
rosa_laevigata	RLG00000012067
rosa_multiflora	Rmu_co8462761.1_g000001 Rmu_sc0000502.1_g000022 Rmu_sc0011695.1_g000001 Rmu_sc0016035.1_g000001
rosa_roxburghii	Rroxscaffold_7G00175470
rosa_rugosa	Rorug06G0223200 Rorug06G0223200 Rorug06G0223200
rosa_samantha	Rh6AG336600 Rh6BG343900 Rh6CG350300 Rh6DG336900
rosa_wichuraiana	Rw6G029300

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	1236, 1295
Acc65I	GGTACC	1 cut(s)	1197
AccB1I	GGYRCC	1 cut(s)	1197
AccBSI	CCGCTC	1 cut(s)	78
AccI	GTMKAC	1 cut(s)	182
AccII	CGCG	1 cut(s)	53
AccIII	TCCGGA	1 cut(s)	1626
AciI	CCGC	8 cut(s)	51, 76, 143, 153, 156, 176, 354, 1065
AclWI	GGATC	3 cut(s)	260, 730, 743
AcoI	YGGCCR	2 cut(s)	219, 875
AcsI	RAATTY	3 cut(s)	203, 1043, 1256
AcyI	GRCGYC	2 cut(s)	69, 150
AdeI	CACNNNGTG	1 cut(s)	473
AfaI	GTAC	2 cut(s)	1117, 1199
AfiI	CCNNNNNNNGG	2 cut(s)	745, 968
AflII	CTTAAG	1 cut(s)	938
AgeI	ACCGGT	1 cut(s)	1194
AgsI	TTSAA	6 cut(s)	636, 728, 1256, 1346, 1417, 1700
AjnI	CCWGG	3 cut(s)	132, 372, 1282
AloI	GAACNNNNNNTCC	4 cut(s)	720, 752, 1486, 1518
AluBI	AGCT	9 cut(s)	16, 291, 303, 368, 538, 543, 1336, 1599, 1643
AluI	AGCT	9 cut(s)	16, 291, 303, 368, 538, 543, 1336, 1599, 1643
Alw21I	GWGCWC	3 cut(s)	591, 1273, 1639
Alw26I	GTCTC	5 cut(s)	537, 814, 969, 1094, 1248
AlwI	GGATC	3 cut(s)	260, 730, 743
AlwNI	CAGNNNCTG	1 cut(s)	627
Ama87I	CYCGRG	2 cut(s)	572, 739
Aor13HI	TCCGGA	1 cut(s)	1626
AoxI	GGCC	8 cut(s)	219, 311, 413, 616, 797, 875, 1279, 1564
ApeKI	GCWGC	3 cut(s)	16, 491, 919
ApoI	RAATTY	3 cut(s)	203, 1043, 1256
ArsI	GACNNNNNNTTYG	2 cut(s)	490, 522
AsiGI	ACCGGT	1 cut(s)	1194
Asp700I	GAANNNNTTC	2 cut(s)	567, 1686
Asp718I	GGTACC	1 cut(s)	1197
AspLEI	GCGC	2 cut(s)	50, 55
AspS9I	GGNCC	4 cut(s)	414, 797, 1280, 1565
AsuC2I	CCSGG	2 cut(s)	295, 560
AsuHPI	GGTGA	5 cut(s)	297, 362, 1220, 1298, 1568
AvaI	CYCGRG	2 cut(s)	572, 739
AxyI	CCTNAGG	1 cut(s)	620
BaeI	ACNNNNGTAYC	2 cut(s)	950, 983
BalI	TGGCCA	1 cut(s)	877
BamHI	GGATCC	1 cut(s)	735
BanI	GGYRCC	1 cut(s)	1197
BanII	GRGCYC	2 cut(s)	655, 1406
BauI	CACGAG	1 cut(s)	468
Bbv12I	GWGCWC	3 cut(s)	591, 1273, 1639
BbvI	GCAGC	3 cut(s)	3, 478, 931
BccI	CCATC	5 cut(s)	89, 612, 1511, 1517, 1631
BceAI	ACGGC	1 cut(s)	112
BciT130I	CCWGG	3 cut(s)	134, 374, 1284
BciVI	GTATCC	1 cut(s)	130
BclI	TGATCA	1 cut(s)	672
BcnI	CCSGG	2 cut(s)	295, 560
BcoDI	GTCTC	5 cut(s)	537, 814, 969, 1094, 1248
BfaI	CTAG	1 cut(s)	1644
BfmI	CTRYAG	1 cut(s)	286
BfoI	RGCGCY	1 cut(s)	51
BfrI	CTTAAG	1 cut(s)	938
BfuI	GTATCC	1 cut(s)	130
BlpI	GCTNAGC	1 cut(s)	539
Bme1390I	CCNGG	5 cut(s)	134, 295, 374, 560, 1284
BmeT110I	CYCGRG	2 cut(s)	572, 739
BmgT120I	GGNCC	4 cut(s)	414, 797, 1280, 1565
BmiI	GGNNCC	3 cut(s)	100, 737, 1199
BmrFI	CCNGG	5 cut(s)	134, 295, 374, 560, 1284
BmsI	GCATC	3 cut(s)	631, 1099, 1433
BpmI	CTGGAG	2 cut(s)	98, 1230
Bpu1102I	GCTNAGC	1 cut(s)	539
BpuEI	CTTGAG	1 cut(s)	713
BpuMI	CCSGG	2 cut(s)	295, 560
Bsa29I	ATCGAT	1 cut(s)	639
BsaHI	GRCGYC	2 cut(s)	69, 150
BsaI	GGTCTC	1 cut(s)	537
BsaJI	CCNNGG	7 cut(s)	132, 308, 373, 410, 558, 790, 1282
BsaWI	WCCGGW	4 cut(s)	805, 1194, 1592, 1626
BsaXI	ACNNNNNCTCC	6 cut(s)	237, 267, 698, 728, 1486, 1516
Bsc4I	CCNNNNNNNGG	2 cut(s)	745, 968
Bse118I	RCCGGY	2 cut(s)	1112, 1194
Bse1I	ACTGG	1 cut(s)	913
Bse21I	CCTNAGG	1 cut(s)	620
Bse3DI	GCAATG	5 cut(s)	526, 771, 1326, 1359, 1365
BseAI	TCCGGA	1 cut(s)	1626
BseBI	CCWGG	3 cut(s)	134, 374, 1284
BseCI	ATCGAT	1 cut(s)	639
BseDI	CCNNGG	7 cut(s)	132, 308, 373, 410, 558, 790, 1282
BseGI	GGATG	4 cut(s)	81, 1448, 1522, 1623
BseLI	CCNNNNNNNGG	2 cut(s)	745, 968
BseMI	GCAATG	5 cut(s)	526, 771, 1326, 1359, 1365
BseMII	CTCAG	8 cut(s)	273, 406, 432, 548, 634, 1023, 1362, 1386
BseNI	ACTGG	1 cut(s)	913
BseRI	GAGGAG	1 cut(s)	245
BseXI	GCAGC	3 cut(s)	3, 478, 931
BsgI	GTGCAG	1 cut(s)	1562
Bsh1236I	CGCG	1 cut(s)	53
Bsh1285I	CGRYCG	1 cut(s)	1128
BshFI	GGCC	8 cut(s)	221, 313, 415, 618, 799, 877, 1281, 1566
BshNI	GGYRCC	1 cut(s)	1197
BshTI	ACCGGT	1 cut(s)	1194
BshVI	ATCGAT	1 cut(s)	639
BsiEI	CGRYCG	1 cut(s)	1128
BsiHKAI	GWGCWC	3 cut(s)	591, 1273, 1639
BsiHKCI	CYCGRG	2 cut(s)	572, 739
BsiSI	CCGG	8 cut(s)	146, 294, 560, 806, 1113, 1195, 1593, 1627
BslFI	GGGAC	2 cut(s)	310, 540
BslI	CCNNNNNNNGG	2 cut(s)	745, 968
BsmAI	GTCTC	5 cut(s)	537, 814, 969, 1094, 1248
BsmFI	GGGAC	2 cut(s)	310, 540
BsmI	GAATGC	2 cut(s)	158, 998
BsnI	GGCC	8 cut(s)	221, 313, 415, 618, 799, 877, 1281, 1566
Bso31I	GGTCTC	1 cut(s)	537
BsoBI	CYCGRG	2 cut(s)	572, 739
Bsp1286I	GDGCHC	5 cut(s)	591, 655, 1273, 1406, 1639
Bsp13I	TCCGGA	1 cut(s)	1626
Bsp143I	GATC	5 cut(s)	63, 265, 672, 735, 1665
Bsp1720I	GCTNAGC	1 cut(s)	539
BspACI	CCGC	8 cut(s)	51, 76, 143, 153, 156, 176, 354, 1065
BspANI	GGCC	8 cut(s)	221, 313, 415, 618, 799, 877, 1281, 1566
BspCNI	CTCAG	8 cut(s)	272, 405, 431, 547, 633, 1024, 1363, 1387
BspDI	ATCGAT	1 cut(s)	639
BspEI	TCCGGA	1 cut(s)	1626
BspFNI	CGCG	1 cut(s)	53
BspLI	GGNNCC	3 cut(s)	100, 737, 1199
BspPI	GGATC	3 cut(s)	260, 730, 743
BspT107I	GGYRCC	1 cut(s)	1197
BspTI	CTTAAG	1 cut(s)	938
BspTNI	GGTCTC	1 cut(s)	537
BsrBI	CCGCTC	1 cut(s)	78
BsrDI	GCAATG	5 cut(s)	526, 771, 1326, 1359, 1365
BsrFI	RCCGGY	2 cut(s)	1112, 1194
BsrI	ACTGG	1 cut(s)	913
BssAI	RCCGGY	2 cut(s)	1112, 1194
BssECI	CCNNGG	7 cut(s)	132, 308, 373, 410, 558, 790, 1282
BssMI	GATC	5 cut(s)	63, 265, 672, 735, 1665
BssNI	GRCGYC	2 cut(s)	69, 150
BssSI	CACGAG	1 cut(s)	468
BssT1I	CCWWGG	1 cut(s)	790
Bst2BI	CACGAG	1 cut(s)	468
Bst2UI	CCWGG	3 cut(s)	134, 374, 1284
Bst4CI	ACNGT	4 cut(s)	629, 832, 1126, 1413
Bst6I	CTCTTC	1 cut(s)	839
BstACI	GRCGYC	2 cut(s)	69, 150
BstAFI	CTTAAG	1 cut(s)	938
BstC8I	GCNNGC	1 cut(s)	1564
BstENI	CCTNNNNNAGG	1 cut(s)	966
BstF5I	GGATG	4 cut(s)	81, 1448, 1522, 1623
BstFNI	CGCG	1 cut(s)	53
BstH2I	RGCGCY	1 cut(s)	51
BstHHI	GCGC	2 cut(s)	50, 55
BstKTI	GATC	5 cut(s)	66, 268, 675, 738, 1668
BstMAI	GTCTC	5 cut(s)	537, 814, 969, 1094, 1248
BstMBI	GATC	5 cut(s)	63, 265, 672, 735, 1665
BstMCI	CGRYCG	1 cut(s)	1128
BstMWI	GCNNNNNNNGC	3 cut(s)	650, 659, 761
BstNI	CCWGG	3 cut(s)	134, 374, 1284
BstNSI	RCATGY	1 cut(s)	1450
BstSCI	CCNGG	5 cut(s)	132, 293, 372, 558, 1282
BstSFI	CTRYAG	1 cut(s)	286
BstUI	CGCG	1 cut(s)	53
BstV1I	GCAGC	3 cut(s)	3, 478, 931
BstX2I	RGATCY	1 cut(s)	735
BstYI	RGATCY	1 cut(s)	735
Bsu15I	ATCGAT	1 cut(s)	639
Bsu36I	CCTNAGG	1 cut(s)	620
BsuI	GTATCC	1 cut(s)	130
BsuRI	GGCC	8 cut(s)	221, 313, 415, 618, 799, 877, 1281, 1566
BsuTUI	ATCGAT	1 cut(s)	639
BtsCI	GGATG	4 cut(s)	81, 1448, 1522, 1623
BtsI	GCAGTG	1 cut(s)	269
BtsIMutI	CAGTG	2 cut(s)	269, 426
Cac8I	GCNNGC	1 cut(s)	1564
CaiI	CAGNNNCTG	1 cut(s)	627
CfoI	GCGC	2 cut(s)	50, 55
Cfr10I	RCCGGY	2 cut(s)	1112, 1194
Cfr13I	GGNCC	4 cut(s)	414, 797, 1280, 1565
ClaI	ATCGAT	1 cut(s)	639
CseI	GACGC	2 cut(s)	77, 158
Csp6I	GTAC	2 cut(s)	1116, 1198
CspAI	ACCGGT	1 cut(s)	1194
CviAII	CATG	1 cut(s)	1447
CviQI	GTAC	2 cut(s)	1116, 1198
DpnI	GATC	5 cut(s)	65, 267, 674, 737, 1667
DpnII	GATC	5 cut(s)	63, 265, 672, 735, 1665
DraIII	CACNNNGTG	1 cut(s)	473
EaeI	YGGCCR	2 cut(s)	219, 875
Eam1104I	CTCTTC	1 cut(s)	839
EarI	CTCTTC	1 cut(s)	839
Eco130I	CCWWGG	1 cut(s)	790
Eco24I	GRGCYC	2 cut(s)	655, 1406
Eco31I	GGTCTC	1 cut(s)	537
Eco81I	CCTNAGG	1 cut(s)	620
Eco88I	CYCGRG	2 cut(s)	572, 739
EcoNI	CCTNNNNNAGG	1 cut(s)	966
EcoO109I	RGGNCCY	2 cut(s)	414, 1565
EcoRI	GAATTC	1 cut(s)	203
EcoRII	CCWGG	3 cut(s)	132, 372, 1282
EcoT14I	CCWWGG	1 cut(s)	790
EcoT22I	ATGCAT	1 cut(s)	1448
EcoT38I	GRGCYC	2 cut(s)	655, 1406
ErhI	CCWWGG	1 cut(s)	790
FaeI	CATG	1 cut(s)	1450
FaqI	GGGAC	2 cut(s)	310, 540
FatI	CATG	1 cut(s)	1446
FbaI	TGATCA	1 cut(s)	672
FblI	GTMKAC	1 cut(s)	182
FokI	GGATG	4 cut(s)	68, 1455, 1529, 1610
FriOI	GRGCYC	2 cut(s)	655, 1406
FspBI	CTAG	1 cut(s)	1644
GlaI	GCGC	2 cut(s)	49, 54
GsuI	CTGGAG	2 cut(s)	98, 1230
HaeII	RGCGCY	1 cut(s)	51
HaeIII	GGCC	8 cut(s)	221, 313, 415, 618, 799, 877, 1281, 1566
HapII	CCGG	8 cut(s)	146, 294, 560, 806, 1113, 1195, 1593, 1627
HgaI	GACGC	2 cut(s)	77, 158
HhaI	GCGC	2 cut(s)	50, 55
Hin1I	GRCGYC	2 cut(s)	69, 150
Hin1II	CATG	1 cut(s)	1450
Hin6I	GCGC	2 cut(s)	48, 53
HinP1I	GCGC	2 cut(s)	48, 53
HincII	GTYRAC	1 cut(s)	245
HindII	GTYRAC	1 cut(s)	245
HinfI	GANTC	8 cut(s)	35, 335, 553, 632, 695, 773, 1475, 1703
HpaII	CCGG	8 cut(s)	146, 294, 560, 806, 1113, 1195, 1593, 1627
HphI	GGTGA	5 cut(s)	297, 362, 1220, 1298, 1568
Hpy166II	GTNNAC	3 cut(s)	183, 245, 1455
Hpy188I	TCNGA	4 cut(s)	395, 411, 828, 991
Hpy188III	TCNNGA	4 cut(s)	622, 739, 1247, 1627
Hpy8I	GTNNAC	3 cut(s)	183, 245, 1455
Hpy99I	CGWCG	5 cut(s)	14, 71, 107, 168, 194
HpyAV	CCTTC	3 cut(s)	390, 1297, 1411
HpyCH4III	ACNGT	4 cut(s)	629, 832, 1126, 1413
HpyF10VI	GCNNNNNNNGC	3 cut(s)	650, 659, 761
Hsp92I	GRCGYC	2 cut(s)	69, 150
Hsp92II	CATG	1 cut(s)	1450
HspAI	GCGC	2 cut(s)	48, 53
Kpn2I	TCCGGA	1 cut(s)	1626
KpnI	GGTACC	1 cut(s)	1201
Ksp22I	TGATCA	1 cut(s)	672
Kzo9I	GATC	5 cut(s)	63, 265, 672, 735, 1665
LmnI	GCTCC	6 cut(s)	83, 104, 173, 296, 706, 1634
Lsp1109I	GCAGC	3 cut(s)	3, 478, 931
LweI	GCATC	3 cut(s)	631, 1099, 1433
MaeI	CTAG	1 cut(s)	1644
MaeIII	GTNAC	2 cut(s)	457, 1171
MalI	GATC	5 cut(s)	65, 267, 674, 737, 1667
MbiI	CCGCTC	1 cut(s)	78
MboI	GATC	5 cut(s)	63, 265, 672, 735, 1665
MboII	GAAGA	7 cut(s)	274, 856, 1073, 1165, 1477, 1698, 1712
MflI	RGATCY	1 cut(s)	735
MhlI	GDGCHC	5 cut(s)	591, 655, 1273, 1406, 1639
MlsI	TGGCCA	1 cut(s)	877
MluCI	AATT	8 cut(s)	203, 387, 526, 645, 1043, 1237, 1256, 1683
MluNI	TGGCCA	1 cut(s)	877
MlyI	GAGTC	4 cut(s)	29, 562, 704, 1469
MmeI	TCCRAC	3 cut(s)	830, 1082, 1414
Mox20I	TGGCCA	1 cut(s)	877
Mph1103I	ATGCAT	1 cut(s)	1448
MroI	TCCGGA	1 cut(s)	1626
MroXI	GAANNNNTTC	2 cut(s)	567, 1686
MscI	TGGCCA	1 cut(s)	877
MseI	TTAA	4 cut(s)	480, 894, 939, 1602
MslI	CAYNNNNRTG	1 cut(s)	1206
Msp20I	TGGCCA	1 cut(s)	877
MspA1I	CMGCKG	1 cut(s)	178
MspCI	CTTAAG	1 cut(s)	938
MspI	CCGG	8 cut(s)	146, 294, 560, 806, 1113, 1195, 1593, 1627
MspR9I	CCNGG	5 cut(s)	134, 295, 374, 560, 1284
MteI	GCGCNGCGC	1 cut(s)	51
Mva1269I	GAATGC	2 cut(s)	158, 998
MvaI	CCWGG	3 cut(s)	134, 374, 1284
MvnI	CGCG	1 cut(s)	53
MwoI	GCNNNNNNNGC	3 cut(s)	650, 659, 761
NciI	CCSGG	2 cut(s)	295, 560
NdeII	GATC	5 cut(s)	63, 265, 672, 735, 1665
NlaIII	CATG	1 cut(s)	1450
NlaIV	GGNNCC	3 cut(s)	100, 737, 1199
NmuCI	GTSAC	1 cut(s)	457
NsiI	ATGCAT	1 cut(s)	1448
NspI	RCATGY	1 cut(s)	1450
PcsI	WCGNNNNNNNCGW	2 cut(s)	198, 1095
PctI	GAATGC	2 cut(s)	158, 998
PdmI	GAANNNNTTC	2 cut(s)	567, 1686
PfeI	GAWTC	4 cut(s)	335, 632, 773, 1703
PfoI	TCCNGGA	1 cut(s)	293
PinAI	ACCGGT	1 cut(s)	1194
PleI	GAGTC	4 cut(s)	29, 561, 703, 1469
PpsI	GAGTC	4 cut(s)	29, 561, 703, 1469
PsiI	TTATAA	2 cut(s)	1236, 1295
Psp6I	CCWGG	3 cut(s)	132, 372, 1282
PspGI	CCWGG	3 cut(s)	132, 372, 1282
PspN4I	GGNNCC	3 cut(s)	100, 737, 1199
PspPI	GGNCC	4 cut(s)	414, 797, 1280, 1565
PstNI	CAGNNNCTG	1 cut(s)	627
PsuI	RGATCY	1 cut(s)	735
RsaI	GTAC	2 cut(s)	1117, 1199
RsaNI	GTAC	2 cut(s)	1116, 1198
RseI	CAYNNNNRTG	1 cut(s)	1206
SaqAI	TTAA	4 cut(s)	480, 894, 939, 1602
Sau3AI	GATC	5 cut(s)	63, 265, 672, 735, 1665
Sau96I	GGNCC	4 cut(s)	414, 797, 1280, 1565
SchI	GAGTC	4 cut(s)	29, 562, 704, 1469
ScrFI	CCNGG	5 cut(s)	134, 295, 374, 560, 1284
SduI	GDGCHC	5 cut(s)	591, 655, 1273, 1406, 1639
SfaNI	GCATC	3 cut(s)	631, 1099, 1433
SfcI	CTRYAG	1 cut(s)	286
SmiMI	CAYNNNNRTG	1 cut(s)	1206
SmlI	CTYRAG	2 cut(s)	692, 938
SmoI	CTYRAG	2 cut(s)	692, 938
Sse9I	AATT	8 cut(s)	203, 387, 526, 645, 1043, 1237, 1256, 1683
SsiI	CCGC	8 cut(s)	51, 76, 143, 153, 156, 176, 354, 1065
SspMI	CTAG	1 cut(s)	1644
StyD4I	CCNGG	5 cut(s)	132, 293, 372, 558, 1282
StyI	CCWWGG	1 cut(s)	790
TaaI	ACNGT	4 cut(s)	629, 832, 1126, 1413
TasI	AATT	8 cut(s)	203, 387, 526, 645, 1043, 1237, 1256, 1683
TauI	GCSGC	7 cut(s)	53, 145, 155, 158, 178, 356, 1067
TfiI	GAWTC	4 cut(s)	335, 632, 773, 1703
Tru1I	TTAA	4 cut(s)	480, 894, 939, 1602
Tru9I	TTAA	4 cut(s)	480, 894, 939, 1602
TscAI	CASTG	2 cut(s)	276, 426
TseFI	GTSAC	1 cut(s)	457
TseI	GCWGC	3 cut(s)	16, 491, 919
Tsp45I	GTSAC	1 cut(s)	457
TspDTI	ATGAA	3 cut(s)	196, 227, 1109
TspGWI	ACGGA	4 cut(s)	20, 91, 152, 160
TspRI	CASTG	2 cut(s)	276, 426
Vha464I	CTTAAG	1 cut(s)	938
XagI	CCTNNNNNAGG	1 cut(s)	966
XapI	RAATTY	3 cut(s)	203, 1043, 1256
XceI	RCATGY	1 cut(s)	1450
XcmI	CCANNNNNNNNNTGG	1 cut(s)	611
XmiI	GTMKAC	1 cut(s)	182
XmnI	GAANNNNTTC	2 cut(s)	567, 1686
XspI	CTAG	1 cut(s)	1644
Zsp2I	ATGCAT	1 cut(s)	1448

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.