Basic Information
Type: gene
Physical Location & Seq
Reverse (-)
25602791 .. 25603612
MD12G1175200.v1.1.491
Length: 249 bp
ATGTACCTTTTTGTGGCGGTGAGTGAAGGGTTGTGGGACGGTGGTTCTGCGTGTGGAAGGCTCTATAAAATTAGGTGCCTGAGTGGATTTAATATGCCCTGCAAGGGTGGTGCTACTGTGGAGGTGAAGGTGGTCGACCTTTGCCGTCAATCTCCTTGCCCTTCTACCATAGCCATGTCAACCGATGCTTTTGCAGCCATCTCACACTCACCTTCTACACGAATCAACATCGAATATGTCCAGATCTGA
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Protein Analysis
7.61
Isoelectric Point (pI)
| Domain Name |
Pfam ID |
Position |
E-value |
Description |
| DPBB_1 |
PF03330 |
6 - 79 |
9.5e-10 |
Lytic transglycolase |
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...
Gene Family Tree
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
Publication-ready
Orthologous Genes
(Group: OG0024425)
Restriction Enzyme Sites
| Enzyme |
Recognition Site |
Cut Count |
Positions (bp) |
| AccB1I |
GGYRCC |
1 cut(s)
|
75 |
| AccI |
GTMKAC |
1 cut(s)
|
135 |
| AciI |
CCGC |
1 cut(s)
|
17 |
| AfaI |
GTAC |
1 cut(s)
|
5 |
| AfiI |
CCNNNNNNNGG |
2 cut(s)
|
13, 104 |
| ApeKI |
GCWGC |
1 cut(s)
|
194 |
| AsuHPI |
GGTGA |
3 cut(s)
|
31, 136, 201 |
| BanI |
GGYRCC |
1 cut(s)
|
75 |
| BbvI |
GCAGC |
1 cut(s)
|
206 |
| BccI |
CCATC |
1 cut(s)
|
206 |
| BceAI |
ACGGC |
1 cut(s)
|
129 |
| BcgI |
CGANNNNNNTGC |
2 cut(s)
|
173, 207 |
| BglII |
AGATCT |
1 cut(s)
|
243 |
| BisI |
GCNGC |
1 cut(s)
|
195 |
| BlsI |
GCNGC |
1 cut(s)
|
196 |
| BmiI |
GGNNCC |
1 cut(s)
|
77 |
| BmsI |
GCATC |
1 cut(s)
|
175 |
| Bsc4I |
CCNNNNNNNGG |
2 cut(s)
|
13, 104 |
| BseLI |
CCNNNNNNNGG |
2 cut(s)
|
13, 104 |
| BseMII |
CTCAG |
1 cut(s)
|
71 |
| BseXI |
GCAGC |
1 cut(s)
|
206 |
| BshNI |
GGYRCC |
1 cut(s)
|
75 |
| BslFI |
GGGAC |
1 cut(s)
|
50 |
| BslI |
CCNNNNNNNGG |
2 cut(s)
|
13, 104 |
| BsmFI |
GGGAC |
1 cut(s)
|
50 |
| Bsp143I |
GATC |
1 cut(s)
|
243 |
| BspACI |
CCGC |
1 cut(s)
|
17 |
| BspCNI |
CTCAG |
1 cut(s)
|
72 |
| BspLI |
GGNNCC |
1 cut(s)
|
77 |
| BspT107I |
GGYRCC |
1 cut(s)
|
75 |
| BssMI |
GATC |
1 cut(s)
|
243 |
| Bst4CI |
ACNGT |
2 cut(s)
|
41, 118 |
| BstDEI |
CTNAG |
1 cut(s)
|
80 |
| BstKTI |
GATC |
1 cut(s)
|
246 |
| BstMBI |
GATC |
1 cut(s)
|
243 |
| BstMWI |
GCNNNNNNNGC |
1 cut(s)
|
194 |
| BstV1I |
GCAGC |
1 cut(s)
|
206 |
| BstX2I |
RGATCY |
1 cut(s)
|
243 |
| BstYI |
RGATCY |
1 cut(s)
|
243 |
| Csp6I |
GTAC |
1 cut(s)
|
4 |
| CviAII |
CATG |
1 cut(s)
|
175 |
| CviJI |
RGCY |
3 cut(s)
|
61, 173, 197 |
| CviKI_1 |
RGCY |
3 cut(s)
|
61, 173, 197 |
| CviQI |
GTAC |
1 cut(s)
|
4 |
| DdeI |
CTNAG |
1 cut(s)
|
80 |
| DpnI |
GATC |
1 cut(s)
|
245 |
| DpnII |
GATC |
1 cut(s)
|
243 |
| FaeI |
CATG |
1 cut(s)
|
178 |
| FaiI |
YATR |
5 cut(s)
|
66, 95, 170, 176, 237 |
| FaqI |
GGGAC |
1 cut(s)
|
50 |
| FatI |
CATG |
1 cut(s)
|
174 |
| FblI |
GTMKAC |
1 cut(s)
|
135 |
| Fnu4HI |
GCNGC |
1 cut(s)
|
195 |
| Fsp4HI |
GCNGC |
1 cut(s)
|
195 |
| GluI |
GCNGC |
1 cut(s)
|
195 |
| Hin1II |
CATG |
1 cut(s)
|
178 |
| HincII |
GTYRAC |
2 cut(s)
|
136, 180 |
| HindII |
GTYRAC |
2 cut(s)
|
136, 180 |
| HinfI |
GANTC |
1 cut(s)
|
222 |
| HphI |
GGTGA |
3 cut(s)
|
31, 136, 201 |
| Hpy166II |
GTNNAC |
2 cut(s)
|
136, 180 |
| Hpy188I |
TCNGA |
1 cut(s)
|
248 |
| Hpy188III |
TCNNGA |
1 cut(s)
|
241 |
| Hpy8I |
GTNNAC |
2 cut(s)
|
136, 180 |
| HpyAV |
CCTTC |
5 cut(s)
|
20, 51, 121, 171, 222 |
| HpyCH4III |
ACNGT |
2 cut(s)
|
41, 118 |
| HpyCH4V |
TGCA |
2 cut(s)
|
102, 194 |
| HpyF10VI |
GCNNNNNNNGC |
1 cut(s)
|
194 |
| HpyF3I |
CTNAG |
1 cut(s)
|
80 |
| Hsp92II |
CATG |
1 cut(s)
|
178 |
| Kzo9I |
GATC |
1 cut(s)
|
243 |
| LpnPI |
CCDG |
2 cut(s)
|
92, 112 |
| Lsp1109I |
GCAGC |
1 cut(s)
|
206 |
| LweI |
GCATC |
1 cut(s)
|
175 |
| MalI |
GATC |
1 cut(s)
|
245 |
| MboI |
GATC |
1 cut(s)
|
243 |
| MflI |
RGATCY |
1 cut(s)
|
243 |
| MluCI |
AATT |
1 cut(s)
|
69 |
| MnlI |
CCTC |
1 cut(s)
|
115 |
| MseI |
TTAA |
1 cut(s)
|
90 |
| MslI |
CAYNNNNRTG |
1 cut(s)
|
173 |
| MwoI |
GCNNNNNNNGC |
1 cut(s)
|
194 |
| NdeII |
GATC |
1 cut(s)
|
243 |
| NlaIII |
CATG |
1 cut(s)
|
178 |
| NlaIV |
GGNNCC |
1 cut(s)
|
77 |
| PfeI |
GAWTC |
1 cut(s)
|
222 |
| PkrI |
GCNGC |
1 cut(s)
|
196 |
| PspN4I |
GGNNCC |
1 cut(s)
|
77 |
| PsuI |
RGATCY |
1 cut(s)
|
243 |
| RsaI |
GTAC |
1 cut(s)
|
5 |
| RsaNI |
GTAC |
1 cut(s)
|
4 |
| RseI |
CAYNNNNRTG |
1 cut(s)
|
173 |
| SalI |
GTCGAC |
1 cut(s)
|
134 |
| SaqAI |
TTAA |
1 cut(s)
|
90 |
| SatI |
GCNGC |
1 cut(s)
|
195 |
| Sau3AI |
GATC |
1 cut(s)
|
243 |
| SetI |
ASST |
6 cut(s)
|
9, 77, 126, 132, 141, 214 |
| SfaNI |
GCATC |
1 cut(s)
|
175 |
| SgeI |
CNNG |
7 cut(s)
|
63, 91, 111, 115, 168, 187, 231 |
| SmiMI |
CAYNNNNRTG |
1 cut(s)
|
173 |
| Sse9I |
AATT |
1 cut(s)
|
69 |
| SsiI |
CCGC |
1 cut(s)
|
17 |
| TaaI |
ACNGT |
2 cut(s)
|
41, 118 |
| TaqI |
TCGA |
2 cut(s)
|
135, 231 |
| TasI |
AATT |
1 cut(s)
|
69 |
| TfiI |
GAWTC |
1 cut(s)
|
222 |
| Tru1I |
TTAA |
1 cut(s)
|
90 |
| Tru9I |
TTAA |
1 cut(s)
|
90 |
| TseI |
GCWGC |
1 cut(s)
|
194 |
| XmiI |
GTMKAC |
1 cut(s)
|
135 |
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.