MD13G1200000.v1.1

Serine threonine-protein kinase WNK8-like

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr13
Physical Location & Seq
Forward (+)
17814103 .. 17814276
174 bp
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UTR
Exon/CDS
Intron
MD13G1200000.v1.1.491

Sequence Viewer

Length: 174 bp
ATGGCTAAGTCTCGGATAGTTTTAACAATGTGGATCTCCGCCCGAACCGCCGAAATTCAGGTACAGAATTCGGGGACATGTGGTTTAATTATGGGATGCAGTTTTCGTCTTCGATCAGCGTTTGATTCCTACACCGTTGCTTGCAAGGCATTTTTTGAGCATGCACCGTCTTAA

Protein Analysis

58

Amino Acids

6.29

Weight (kDa)

9.1

Isoelectric Point (pI)

42.73

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0021126)

Species Orthologous Gene IDs
malus_domestica MD13G1200000.v1.1
rosa_samantha Rh7AG065600 Rh7BG081500 Rh7CG082200 Rh7DG083200

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 2 cut(s) 39, 48
AclWI GGATC 1 cut(s) 41
AcsI RAATTY 2 cut(s) 54, 67
AfaI GTAC 1 cut(s) 63
AflIII ACRYGT 1 cut(s) 77
Alw26I GTCTC 1 cut(s) 15
AlwI GGATC 1 cut(s) 41
ApoI RAATTY 2 cut(s) 54, 67
BbsI GAAGAC 1 cut(s) 101
BcoDI GTCTC 1 cut(s) 15
BmsI GCATC 1 cut(s) 86
BpiI GAAGAC 1 cut(s) 101
BseGI GGATG 1 cut(s) 101
BslFI GGGAC 1 cut(s) 88
BsmAI GTCTC 1 cut(s) 15
BsmFI GGGAC 1 cut(s) 88
Bsp143I GATC 2 cut(s) 33, 113
BspACI CCGC 2 cut(s) 39, 48
BspPI GGATC 1 cut(s) 41
BssMI GATC 2 cut(s) 33, 113
Bst4CI ACNGT 2 cut(s) 136, 168
BstC8I GCNNGC 2 cut(s) 142, 162
BstDEI CTNAG 1 cut(s) 6
BstF5I GGATG 1 cut(s) 101
BstKTI GATC 2 cut(s) 36, 116
BstMAI GTCTC 1 cut(s) 15
BstMBI GATC 2 cut(s) 33, 113
BstMWI GCNNNNNNNGC 2 cut(s) 47, 146
BstNSI RCATGY 2 cut(s) 81, 164
BstV2I GAAGAC 1 cut(s) 101
BstX2I RGATCY 1 cut(s) 33
BstYI RGATCY 1 cut(s) 33
BtsCI GGATG 1 cut(s) 101
Cac8I GCNNGC 2 cut(s) 142, 162
Csp6I GTAC 1 cut(s) 62
CviAII CATG 2 cut(s) 78, 161
CviJI RGCY 1 cut(s) 5
CviKI_1 RGCY 1 cut(s) 5
CviQI GTAC 1 cut(s) 62
DdeI CTNAG 1 cut(s) 6
DpnI GATC 2 cut(s) 35, 115
DpnII GATC 2 cut(s) 33, 113
EciI GGCGGA 1 cut(s) 28
EcoRI GAATTC 1 cut(s) 67
FaeI CATG 2 cut(s) 81, 164
FaiI YATR 3 cut(s) 79, 92, 162
FaqI GGGAC 1 cut(s) 88
FatI CATG 2 cut(s) 77, 160
FokI GGATG 1 cut(s) 108
Hin1II CATG 2 cut(s) 81, 164
HinfI GANTC 1 cut(s) 125
Hpy188I TCNGA 1 cut(s) 15
HpyCH4III ACNGT 2 cut(s) 136, 168
HpyCH4V TGCA 3 cut(s) 99, 144, 164
HpyF10VI GCNNNNNNNGC 2 cut(s) 47, 146
HpyF3I CTNAG 1 cut(s) 6
Hsp92II CATG 2 cut(s) 81, 164
Kzo9I GATC 2 cut(s) 33, 113
LpnPI CCDG 1 cut(s) 44
LweI GCATC 1 cut(s) 86
MalI GATC 2 cut(s) 35, 115
MboI GATC 2 cut(s) 33, 113
MboII GAAGA 1 cut(s) 101
MflI RGATCY 1 cut(s) 33
MluCI AATT 3 cut(s) 54, 67, 87
MseI TTAA 3 cut(s) 23, 86, 172
MwoI GCNNNNNNNGC 2 cut(s) 47, 146
NdeII GATC 2 cut(s) 33, 113
NlaIII CATG 2 cut(s) 81, 164
NspI RCATGY 2 cut(s) 81, 164
PaeI GCATGC 1 cut(s) 164
PciI ACATGT 1 cut(s) 77
PfeI GAWTC 1 cut(s) 125
PscI ACATGT 1 cut(s) 77
PsuI RGATCY 1 cut(s) 33
RsaI GTAC 1 cut(s) 63
RsaNI GTAC 1 cut(s) 62
SaqAI TTAA 3 cut(s) 23, 86, 172
Sau3AI GATC 2 cut(s) 33, 113
SetI ASST 1 cut(s) 63
SfaNI GCATC 1 cut(s) 86
SgeI CNNG 7 cut(s) 24, 54, 71, 84, 90, 153, 157
SphI GCATGC 1 cut(s) 164
Sse9I AATT 3 cut(s) 54, 67, 87
SsiI CCGC 2 cut(s) 39, 48
TaaI ACNGT 2 cut(s) 136, 168
TaqI TCGA 1 cut(s) 112
TasI AATT 3 cut(s) 54, 67, 87
TfiI GAWTC 1 cut(s) 125
Tru1I TTAA 3 cut(s) 23, 86, 172
Tru9I TTAA 3 cut(s) 23, 86, 172
XapI RAATTY 2 cut(s) 54, 67
XceI RCATGY 2 cut(s) 81, 164
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.