MD13G1233800.v1.1

Protein of unknown function (DUF1681)

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr13
Physical Location & Seq
Forward (+)
23337998 .. 23338717
720 bp
Loading structure...
UTR
Exon/CDS
Intron
MD13G1233800.v1.1.491

Sequence Viewer

Length: 366 bp
ATGGTGGTTGTATTTGTCTGTTATTTGAAAGGAATTCAAACAGAGAGAGAGGGAGAGGGTAGGTTTGTTGTCAGTGAAATTGAAGGATGGTCTGATGTATCCTTGCAAGTGAACTATATGCTCGCACACCCTCATCCAGTGGAACCTGTAACTGATAACTGCAGATATTTTGTTCTACGTGTAGAGGGGAACATTGGTGGGCTTATATACTCTCTAACCGTTGCAATCTCTAATGATTTAGTGAATCCTATTATCCTATTGTTGGAACAATTCAAAGAGTGTTTTAGCTTGTATTTCCCTTCGTTATTGGCTCCTAAGATAGATTTCCCCCCTTACCCAGTTCACTGTTGTGCATTTGACCTATAA

Protein Analysis

122

Amino Acids

13.7

Weight (kDa)

4.71

Isoelectric Point (pI)

44.87

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0028250)

Species Orthologous Gene IDs
malus_domestica MD13G1233800.v1.1
pyrus_communis pycom01g09190

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcsI RAATTY 1 cut(s) 33
AfiI CCNNNNNNNGG 1 cut(s) 262
AflIII ACRYGT 1 cut(s) 178
AgsI TTSAA 4 cut(s) 28, 38, 83, 274
AleI CACNNNNGTG 1 cut(s) 348
AluBI AGCT 1 cut(s) 288
AluI AGCT 1 cut(s) 288
ApoI RAATTY 1 cut(s) 33
BccI CCATC 1 cut(s) 81
BciVI GTATCC 1 cut(s) 109
BfmI CTRYAG 1 cut(s) 160
BfuI GTATCC 1 cut(s) 109
BmiI GGNNCC 2 cut(s) 144, 312
BmrI ACTGGG 1 cut(s) 332
BmuI ACTGGG 1 cut(s) 332
BsaAI YACGTR 1 cut(s) 179
Bsc4I CCNNNNNNNGG 1 cut(s) 262
Bse1I ACTGG 2 cut(s) 137, 338
BseGI GGATG 2 cut(s) 92, 133
BseLI CCNNNNNNNGG 1 cut(s) 262
BseNI ACTGG 2 cut(s) 137, 338
BslI CCNNNNNNNGG 1 cut(s) 262
BspLI GGNNCC 2 cut(s) 144, 312
BspMAI CTGCAG 1 cut(s) 164
BsrI ACTGG 2 cut(s) 137, 338
Bst4CI ACNGT 2 cut(s) 220, 347
BstBAI YACGTR 1 cut(s) 179
BstC8I GCNNGC 1 cut(s) 123
BstDEI CTNAG 1 cut(s) 315
BstF5I GGATG 2 cut(s) 92, 133
BstSFI CTRYAG 1 cut(s) 160
BsuI GTATCC 1 cut(s) 109
BtsCI GGATG 2 cut(s) 92, 133
BtsIMutI CAGTG 3 cut(s) 79, 144, 343
Cac8I GCNNGC 1 cut(s) 123
CviJI RGCY 3 cut(s) 202, 288, 311
CviKI_1 RGCY 3 cut(s) 202, 288, 311
DdeI CTNAG 1 cut(s) 315
EcoRI GAATTC 1 cut(s) 33
FaiI YATR 5 cut(s) 117, 119, 206, 208, 364
FokI GGATG 2 cut(s) 99, 120
HinfI GANTC 1 cut(s) 244
Hpy166II GTNNAC 2 cut(s) 112, 343
Hpy188I TCNGA 1 cut(s) 94
Hpy8I GTNNAC 2 cut(s) 112, 343
HpyAV CCTTC 2 cut(s) 77, 309
HpyCH4III ACNGT 2 cut(s) 220, 347
HpyCH4IV ACGT 1 cut(s) 178
HpyCH4V TGCA 4 cut(s) 106, 162, 224, 353
HpyF3I CTNAG 1 cut(s) 315
HpySE526I ACGT 1 cut(s) 178
LmnI GCTCC 1 cut(s) 316
LpnPI CCDG 3 cut(s) 150, 159, 351
MaeII ACGT 1 cut(s) 178
MaeIII GTNAC 1 cut(s) 148
MluCI AATT 3 cut(s) 33, 78, 269
MmeI TCCRAC 1 cut(s) 243
MnlI CCTC 4 cut(s) 43, 49, 141, 178
MslI CAYNNNNRTG 1 cut(s) 348
NlaIV GGNNCC 2 cut(s) 144, 312
OliI CACNNNNGTG 1 cut(s) 348
PfeI GAWTC 1 cut(s) 244
Ppu21I YACGTR 1 cut(s) 179
PspN4I GGNNCC 2 cut(s) 144, 312
PstI CTGCAG 1 cut(s) 164
RseI CAYNNNNRTG 1 cut(s) 348
SetI ASST 5 cut(s) 65, 148, 181, 290, 363
SfcI CTRYAG 1 cut(s) 160
SgeI CNNG 8 cut(s) 115, 119, 134, 149, 158, 191, 301, 350
SmiMI CAYNNNNRTG 1 cut(s) 348
Sse9I AATT 3 cut(s) 33, 78, 269
TaaI ACNGT 2 cut(s) 220, 347
TaiI ACGT 1 cut(s) 181
TasI AATT 3 cut(s) 33, 78, 269
TfiI GAWTC 1 cut(s) 244
TscAI CASTG 3 cut(s) 79, 144, 350
TspRI CASTG 3 cut(s) 79, 144, 350
XapI RAATTY 1 cut(s) 33
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.