pycom01g09190

Protein of unknown function (DUF1681)

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr1
Physical Location & Seq
Forward (+)
10201006 .. 10201661
656 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom01g09190.2

Sequence Viewer

Length: 471 bp
ATGATTGAAGTTATTCCCTTTGCTTTCATTTCTGCTTTTGTTCTTTTGGGCTTTGAGCACGTTGAGGATGGTAAAATCAATTATTTTGATTTTGGAAGTCTACTTTGTTTTTCAGCTTTAGCACTTGGGAGAAGTGAAAATATGATTTCGTGTATGGTGCTTGTATTTGTCTGTCATTTGAAAGGAATTCAGAGAGAGAGAGAGAAAGGAGAGGGTAGGTTTGTTGTCAGTGAGATTGAAGGATGGTCTGATGTATCCTTGCAGGTGAACTACATGCTCGCGCACCCTCATCCAGTGGAACCTGTAACTGATAGCTGCAGATATTTTGTTCTACGTGTAGAGGGGAACATTGGTGAGCTTATATACTCTCTCATTGTTGCAATCTCTAATGATTTAGTGAATCCTATTATCCTATCGTTCGAACAATTCAAAGAGTGTTTTAGCCTGTATTTCCTTCCGTTAGTGTTTTAG

Protein Analysis

157

Amino Acids

17.72

Weight (kDa)

4.79

Isoelectric Point (pI)

44.39

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0028250)

Species Orthologous Gene IDs
malus_domestica MD13G1233800.v1.1
pyrus_communis pycom01g09190

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 253
Acc36I ACCTGC 1 cut(s) 253
AccI GTMKAC 1 cut(s) 100
AccII CGCG 1 cut(s) 281
AcsI RAATTY 1 cut(s) 186
AflIII ACRYGT 1 cut(s) 334
AgsI TTSAA 4 cut(s) 8, 181, 239, 430
AluBI AGCT 3 cut(s) 116, 315, 358
AluI AGCT 3 cut(s) 116, 315, 358
Alw21I GWGCWC 1 cut(s) 60
ApeKI GCWGC 1 cut(s) 315
ApoI RAATTY 1 cut(s) 186
Asp700I GAANNNNTTC 1 cut(s) 12
AspLEI GCGC 1 cut(s) 283
AsuHPI GGTGA 2 cut(s) 277, 365
AsuII TTCGAA 1 cut(s) 420
Bbv12I GWGCWC 1 cut(s) 60
BbvI GCAGC 1 cut(s) 302
BccI CCATC 2 cut(s) 62, 237
BciVI GTATCC 1 cut(s) 265
BfmI CTRYAG 1 cut(s) 316
BfuAI ACCTGC 1 cut(s) 253
BfuI GTATCC 1 cut(s) 265
BisI GCNGC 1 cut(s) 316
BlsI GCNGC 1 cut(s) 317
BmiI GGNNCC 1 cut(s) 300
Bpu14I TTCGAA 1 cut(s) 420
BsaAI YACGTR 1 cut(s) 335
Bse1I ACTGG 1 cut(s) 293
BseGI GGATG 3 cut(s) 73, 248, 289
BseNI ACTGG 1 cut(s) 293
BseXI GCAGC 1 cut(s) 302
Bsh1236I CGCG 1 cut(s) 281
BsiHKAI GWGCWC 1 cut(s) 60
Bsp119I TTCGAA 1 cut(s) 420
Bsp1286I GDGCHC 1 cut(s) 60
BspFNI CGCG 1 cut(s) 281
BspLI GGNNCC 1 cut(s) 300
BspMAI CTGCAG 1 cut(s) 320
BspMI ACCTGC 1 cut(s) 253
BspT104I TTCGAA 1 cut(s) 420
BsrI ACTGG 1 cut(s) 293
BstBAI YACGTR 1 cut(s) 335
BstBI TTCGAA 1 cut(s) 420
BstC8I GCNNGC 1 cut(s) 279
BstF5I GGATG 3 cut(s) 73, 248, 289
BstFNI CGCG 1 cut(s) 281
BstHHI GCGC 1 cut(s) 283
BstNSI RCATGY 1 cut(s) 277
BstSFI CTRYAG 1 cut(s) 316
BstUI CGCG 1 cut(s) 281
BstV1I GCAGC 1 cut(s) 302
BsuI GTATCC 1 cut(s) 265
BtsCI GGATG 3 cut(s) 73, 248, 289
BtsIMutI CAGTG 2 cut(s) 235, 300
BveI ACCTGC 1 cut(s) 253
Cac8I GCNNGC 1 cut(s) 279
CfoI GCGC 1 cut(s) 283
CviAII CATG 1 cut(s) 274
CviJI RGCY 5 cut(s) 51, 116, 315, 358, 444
CviKI_1 RGCY 5 cut(s) 51, 116, 315, 358, 444
EcoRI GAATTC 1 cut(s) 186
FaeI CATG 1 cut(s) 277
FaiI YATR 5 cut(s) 143, 155, 275, 362, 364
FatI CATG 1 cut(s) 273
FblI GTMKAC 1 cut(s) 100
Fnu4HI GCNGC 1 cut(s) 316
FokI GGATG 3 cut(s) 80, 255, 276
Fsp4HI GCNGC 1 cut(s) 316
GlaI GCGC 1 cut(s) 282
GluI GCNGC 1 cut(s) 316
HhaI GCGC 1 cut(s) 283
Hin1II CATG 1 cut(s) 277
Hin6I GCGC 1 cut(s) 281
HinP1I GCGC 1 cut(s) 281
HinfI GANTC 1 cut(s) 400
HphI GGTGA 2 cut(s) 277, 365
Hpy166II GTNNAC 2 cut(s) 101, 268
Hpy188I TCNGA 2 cut(s) 192, 250
Hpy8I GTNNAC 2 cut(s) 101, 268
HpyAV CCTTC 2 cut(s) 233, 464
HpyCH4IV ACGT 2 cut(s) 60, 334
HpyCH4V TGCA 3 cut(s) 262, 318, 380
HpySE526I ACGT 2 cut(s) 60, 334
Hsp92II CATG 1 cut(s) 277
HspAI GCGC 1 cut(s) 281
LpnPI CCDG 4 cut(s) 248, 306, 315, 458
Lsp1109I GCAGC 1 cut(s) 302
MaeII ACGT 2 cut(s) 60, 334
MaeIII GTNAC 1 cut(s) 304
MhlI GDGCHC 1 cut(s) 60
MluCI AATT 3 cut(s) 79, 186, 425
MnlI CCTC 4 cut(s) 58, 205, 297, 334
MroXI GAANNNNTTC 1 cut(s) 12
MvnI CGCG 1 cut(s) 281
NlaIII CATG 1 cut(s) 277
NlaIV GGNNCC 1 cut(s) 300
NspI RCATGY 1 cut(s) 277
NspV TTCGAA 1 cut(s) 420
PaqCI CACCTGC 1 cut(s) 253
PdmI GAANNNNTTC 1 cut(s) 12
PfeI GAWTC 1 cut(s) 400
PkrI GCNGC 1 cut(s) 317
Ppu21I YACGTR 1 cut(s) 335
PspN4I GGNNCC 1 cut(s) 300
PstI CTGCAG 1 cut(s) 320
SatI GCNGC 1 cut(s) 316
SduI GDGCHC 1 cut(s) 60
SetI ASST 8 cut(s) 63, 118, 221, 267, 304, 317, 337, 360
SfcI CTRYAG 1 cut(s) 316
SfuI TTCGAA 1 cut(s) 420
Sse9I AATT 3 cut(s) 79, 186, 425
TaiI ACGT 2 cut(s) 63, 337
TaqI TCGA 1 cut(s) 420
TasI AATT 3 cut(s) 79, 186, 425
TfiI GAWTC 1 cut(s) 400
TscAI CASTG 2 cut(s) 235, 300
TseI GCWGC 1 cut(s) 315
TspDTI ATGAA 1 cut(s) 16
TspGWI ACGGA 1 cut(s) 447
TspRI CASTG 2 cut(s) 235, 300
XapI RAATTY 1 cut(s) 186
XceI RCATGY 1 cut(s) 277
XmiI GTMKAC 1 cut(s) 100
XmnI GAANNNNTTC 1 cut(s) 12
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.