MD16G1133500.v1.1

No description available

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr16
Physical Location & Seq
Forward (+)
10260580 .. 10261257
678 bp
Loading structure...
UTR
Exon/CDS
Intron
MD16G1133500.v1.1.491

Sequence Viewer

Length: 138 bp
ATGTTTTTTTCTTCAGTATCTATTAATGTGGTGCTCAAAAACCGATTGAGAATGACGCAACCAGAGACAATTTGGGTACAAACTCAACTGCAAACGAAAAAAATTGTTCAGGTATATGTCTTCCATTTGTGTTTTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

46

Amino Acids

5.4

Weight (kDa)

10.03

Isoelectric Point (pI)

18.84

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0024247)

Species Orthologous Gene IDs
malus_domestica MD13G1240700.v1.1 MD16G1133500.v1.1
pyrus_communis pycom13g27230

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AfaI GTAC 1 cut(s) 78
Alw21I GWGCWC 1 cut(s) 36
Alw26I GTCTC 1 cut(s) 59
AseI ATTAAT 1 cut(s) 24
BbsI GAAGAC 1 cut(s) 112
Bbv12I GWGCWC 1 cut(s) 36
BcoDI GTCTC 1 cut(s) 59
BpiI GAAGAC 1 cut(s) 112
BsiHKAI GWGCWC 1 cut(s) 36
BsmAI GTCTC 1 cut(s) 59
Bsp1286I GDGCHC 1 cut(s) 36
BstMAI GTCTC 1 cut(s) 59
BstV2I GAAGAC 1 cut(s) 112
CseI GACGC 1 cut(s) 64
Csp6I GTAC 1 cut(s) 77
CviQI GTAC 1 cut(s) 77
FaiI YATR 2 cut(s) 115, 117
FspEI CC 6 cut(s) 14, 56, 58, 59, 75, 95
HgaI GACGC 1 cut(s) 64
HpyCH4V TGCA 1 cut(s) 91
LpnPI CCDG 2 cut(s) 75, 95
MboII GAAGA 2 cut(s) 3, 112
MhlI GDGCHC 1 cut(s) 36
MluCI AATT 2 cut(s) 69, 102
MseI TTAA 2 cut(s) 24, 136
PshBI ATTAAT 1 cut(s) 24
RsaI GTAC 1 cut(s) 78
RsaNI GTAC 1 cut(s) 77
SaqAI TTAA 2 cut(s) 24, 136
SduI GDGCHC 1 cut(s) 36
SetI ASST 1 cut(s) 114
SgeI CNNG 2 cut(s) 74, 122
Sse9I AATT 2 cut(s) 69, 102
TasI AATT 2 cut(s) 69, 102
Tru1I TTAA 2 cut(s) 24, 136
Tru9I TTAA 2 cut(s) 24, 136
VspI ATTAAT 1 cut(s) 24
XcmI CCANNNNNNNNNTGG 1 cut(s) 69
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.