Prupe.1G020500_v2.0.a1

late embryogenesis abundant protein

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
Physical Location & Seq
Forward (+)
1447287 .. 1449189
1903 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G020500.1

Sequence Viewer

Length: 1344 bp
ATGGAAAACGAGAACATTTCTGATCTGAGAGAAGAAAGTGGAGTCACGAATCAAGATTCTCAAAGTCTTGATCTTGAAGCTGTTCAAGCGACATCAGAAATGAACAAATCCACCATGGAAGATAAGCATAAGGGCAGTGGATCGATCTTGACTGAAGAAATTATGGGCCATGACCAGCGTACTGGTTTGGTGGTTGAGAAAGAAGAAAGCCCAAAAATGAGTGGGGTTTTGCGGGGTAAGACTGAAGGGTTGAAAAGCGAAAAAGAAGAAGAGGCTGTGAAAGCAAAGTTCTTGAATGAAAAATTGGTGGGTTGCGATGAGATTGTGGGTTTGAGAACTGGGTCAGTGTGTGGACAAGAGAACAGTACTGAAGATGGGAATGGGGTAGTTGCTGATCAGCAGGGCCTCAATCTTCCTCTTGATTCTGAAATTACTGATTCAGAATTGAGGCATTCTTGTAGTTCTGAAGGAGATGGGAAAATGATTGTGGATTCGGATGAGATTGCGAAAGAAGAGGTTGTGAAATCAGTGTTCTTGAATGAAAAAATGGTGGGTTCGGATGAGATTGTGGGTTCAGCAAAGACTGAAAATGGGAAAGGGGTAGTTACTGATCAGCAAGACCTCAATAATCTTGTTCCTGAAATTGCTGAGAAAGAACAGATTGGTTCTGGTTCAGGGTCGAGTTTATGTTGTAGTGAAGGAGTTACAGATCAATATTTGAAGTTTGTAATGAGAGCAGATGACGTGACATTAGGAGAGGCTGATGAATCCAATCAAGAATGGAGGGATTTCAAAGATGCTATCATGAGAGCAGATCAGCTGGACCTAGAGTCTATTGGCCTAAAGATTGAACGTCGGGTGCAAGCTTCGGTTGAGGACGTGGTGAAAAGATATTCCCAGATGAATTCAATGACAATGTCTCTCTCTATAGGTGACTGGGAGAAAATTCTGGAGAGCAGAGATGTTTCTGGATTGGAAGCTGATCGAGTAACTATGCTGAGAGAATCTGGAGAGCAAAGAAAGATGCAGGCATTAAAGGCCTATTCTGAGTCTCAACTTTCTGATATGGAAGATAAACTTGGTGTTATTAAGGAAGCAGAAGTTGATAATGGGAAGACTATTGCTGAACTTGAAGAAGAAACAAAAACTGAAGTTGAGAAGGAAAACAATGCGATTCATGAATTGCAGGAACTAGTTACCGTGGAAGAATCAAAAGAGACTGAGTTGAAAATGGAGATGCCATCAAAGGCCCCAGGGCTGCTGCATCGGCCTAAGCTGCTGATGTCTGTCGGTGTCGTAATAACTGCTATACTTTACACAGCATTGAAGATGAAGCGAAGGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

448

Amino Acids

49.34

Weight (kDa)

4.55

Isoelectric Point (pI)

50.83

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0024548)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 232
AclWI GGATC 1 cut(s) 148
AcsI RAATTY 2 cut(s) 904, 945
AcuI CTGAAG 5 cut(s) 174, 264, 390, 486, 1170
AfaI GTAC 2 cut(s) 181, 367
AhdI GACNNNNNGTC 1 cut(s) 829
AhlI ACTAGT 1 cut(s) 1192
AjiI CACGTC 2 cut(s) 745, 880
AjnI CCWGG 1 cut(s) 1252
AjuI GAANNNNNNNTTGG 4 cut(s) 287, 319, 1062, 1094
AluBI AGCT 5 cut(s) 80, 820, 866, 980, 1276
AluI AGCT 5 cut(s) 80, 820, 866, 980, 1276
Alw26I GTCTC 3 cut(s) 924, 1056, 1211
AlwI GGATC 1 cut(s) 148
AoxI GGCC 6 cut(s) 166, 403, 838, 1038, 1248, 1268
ApeKI GCWGC 3 cut(s) 1258, 1261, 1276
ApoI RAATTY 2 cut(s) 904, 945
Asp700I GAANNNNTTC 1 cut(s) 81
AspS9I GGNCC 4 cut(s) 166, 403, 823, 1249
AsuHPI GGTGA 2 cut(s) 895, 944
AvaII GGWCC 1 cut(s) 823
BbsI GAAGAC 1 cut(s) 1121
BbvI GCAGC 3 cut(s) 1245, 1248, 1263
BccI CCATC 3 cut(s) 368, 467, 1249
BciT130I CCWGG 1 cut(s) 1254
BclI TGATCA 2 cut(s) 394, 610
BcoDI GTCTC 3 cut(s) 924, 1056, 1211
BcuI ACTAGT 1 cut(s) 1192
BfaI CTAG 2 cut(s) 827, 1193
BfmI CTRYAG 1 cut(s) 927
BisI GCNGC 3 cut(s) 1259, 1262, 1277
BlsI GCNGC 3 cut(s) 1260, 1263, 1278
BmcAI AGTACT 1 cut(s) 367
Bme1390I CCNGG 1 cut(s) 1254
Bme18I GGWCC 1 cut(s) 823
BmeRI GACNNNNNGTC 1 cut(s) 829
BmgBI CACGTC 2 cut(s) 745, 880
BmgT120I GGNCC 4 cut(s) 166, 403, 823, 1249
BmiI GGNNCC 1 cut(s) 1251
BmrFI CCNGG 1 cut(s) 1254
BmrI ACTGGG 2 cut(s) 348, 946
BmsI GCATC 4 cut(s) 787, 1014, 1227, 1273
BmuI ACTGGG 2 cut(s) 348, 946
BpiI GAAGAC 1 cut(s) 1121
BpmI CTGGAG 2 cut(s) 971, 1029
Bpu10I CCTNAGC 1 cut(s) 1272
Bsa29I ATCGAT 1 cut(s) 143
BsaJI CCNNGG 4 cut(s) 114, 1200, 1252, 1253
Bse1I ACTGG 3 cut(s) 187, 343, 941
BseBI CCWGG 1 cut(s) 1254
BseCI ATCGAT 1 cut(s) 143
BseDI CCNNGG 4 cut(s) 114, 1200, 1252, 1253
BseGI GGATG 2 cut(s) 502, 565
BseMII CTCAG 5 cut(s) 17, 639, 989, 1038, 1212
BseNI ACTGG 3 cut(s) 187, 343, 941
BseXI GCAGC 3 cut(s) 1245, 1248, 1263
BshFI GGCC 6 cut(s) 168, 405, 840, 1040, 1250, 1270
BshVI ATCGAT 1 cut(s) 143
BsmAI GTCTC 3 cut(s) 924, 1056, 1211
BsmI GAATGC 1 cut(s) 451
BsnI GGCC 6 cut(s) 168, 405, 840, 1040, 1250, 1270
Bsp143I GATC 9 cut(s) 22, 70, 140, 144, 394, 610, 709, 814, 982
Bsp19I CCATGG 1 cut(s) 114
BspACI CCGC 1 cut(s) 232
BspANI GGCC 6 cut(s) 168, 405, 840, 1040, 1250, 1270
BspCNI CTCAG 5 cut(s) 18, 640, 990, 1039, 1213
BspDI ATCGAT 1 cut(s) 143
BspHI TCATGA 2 cut(s) 804, 1177
BspLI GGNNCC 1 cut(s) 1251
BspPI GGATC 1 cut(s) 148
BsrI ACTGG 3 cut(s) 187, 343, 941
BssECI CCNNGG 4 cut(s) 114, 1200, 1252, 1253
BssMI GATC 9 cut(s) 22, 70, 140, 144, 394, 610, 709, 814, 982
BssT1I CCWWGG 1 cut(s) 114
Bst2UI CCWGG 1 cut(s) 1254
Bst4CI ACNGT 2 cut(s) 365, 1201
Bst6I CTCTTC 2 cut(s) 264, 507
BstC8I GCNNGC 2 cut(s) 864, 1029
BstDEI CTNAG 6 cut(s) 26, 648, 998, 1047, 1221, 1272
BstDSI CCRYGG 2 cut(s) 114, 1200
BstF5I GGATG 2 cut(s) 502, 565
BstKTI GATC 9 cut(s) 25, 73, 143, 147, 397, 613, 712, 817, 985
BstMAI GTCTC 3 cut(s) 924, 1056, 1211
BstMBI GATC 9 cut(s) 22, 70, 140, 144, 394, 610, 709, 814, 982
BstMWI GCNNNNNNNGC 5 cut(s) 86, 281, 1037, 1267, 1276
BstNI CCWGG 1 cut(s) 1254
BstSCI CCNGG 1 cut(s) 1252
BstSFI CTRYAG 1 cut(s) 927
BstV1I GCAGC 3 cut(s) 1245, 1248, 1263
BstV2I GAAGAC 1 cut(s) 1121
BstXI CCANNNNNNTGG 1 cut(s) 182
Bsu15I ATCGAT 1 cut(s) 143
BsuRI GGCC 6 cut(s) 168, 405, 840, 1040, 1250, 1270
BsuTUI ATCGAT 1 cut(s) 143
BtgI CCRYGG 2 cut(s) 114, 1200
BtgZI GCGATG 1 cut(s) 330
BtrI CACGTC 2 cut(s) 745, 880
BtsCI GGATG 2 cut(s) 502, 565
BtsI GCAGTG 1 cut(s) 142
BtsIMutI CAGTG 3 cut(s) 142, 351, 534
Cac8I GCNNGC 2 cut(s) 864, 1029
CciI TCATGA 2 cut(s) 804, 1177
Cfr13I GGNCC 4 cut(s) 166, 403, 823, 1249
ClaI ATCGAT 1 cut(s) 143
Csp6I GTAC 2 cut(s) 180, 366
CviAII CATG 4 cut(s) 115, 170, 805, 1178
CviQI GTAC 2 cut(s) 180, 366
DdeI CTNAG 6 cut(s) 26, 648, 998, 1047, 1221, 1272
DpnI GATC 9 cut(s) 24, 72, 142, 146, 396, 612, 711, 816, 984
DpnII GATC 9 cut(s) 22, 70, 140, 144, 394, 610, 709, 814, 982
DriI GACNNNNNGTC 1 cut(s) 829
Eam1104I CTCTTC 2 cut(s) 264, 507
Eam1105I GACNNNNNGTC 1 cut(s) 829
EarI CTCTTC 2 cut(s) 264, 507
Eco130I CCWWGG 1 cut(s) 114
Eco147I AGGCCT 1 cut(s) 1040
Eco47I GGWCC 1 cut(s) 823
Eco57I CTGAAG 5 cut(s) 174, 264, 390, 486, 1170
EcoO109I RGGNCCY 2 cut(s) 403, 1249
EcoRI GAATTC 1 cut(s) 904
EcoRII CCWGG 1 cut(s) 1252
EcoT14I CCWWGG 1 cut(s) 114
ErhI CCWWGG 1 cut(s) 114
FaeI CATG 4 cut(s) 118, 173, 808, 1181
FalI AAGNNNNNCTT 2 cut(s) 1062, 1094
FatI CATG 4 cut(s) 114, 169, 804, 1177
FauI CCCGC 1 cut(s) 225
FbaI TGATCA 2 cut(s) 394, 610
Fnu4HI GCNGC 3 cut(s) 1259, 1262, 1277
FokI GGATG 2 cut(s) 509, 572
Fsp4HI GCNGC 3 cut(s) 1259, 1262, 1277
FspBI CTAG 2 cut(s) 827, 1193
GluI GCNGC 3 cut(s) 1259, 1262, 1277
GsuI CTGGAG 2 cut(s) 971, 1029
HaeIII GGCC 6 cut(s) 168, 405, 840, 1040, 1250, 1270
Hin1II CATG 4 cut(s) 118, 173, 808, 1181
HindIII AAGCTT 1 cut(s) 864
HphI GGTGA 2 cut(s) 895, 944
Hpy166II GTNNAC 1 cut(s) 353
Hpy8I GTNNAC 1 cut(s) 353
Hpy99I CGWCG 1 cut(s) 858
HpyAV CCTTC 5 cut(s) 239, 461, 692, 1153, 1332
HpyCH4III ACNGT 2 cut(s) 365, 1201
HpyCH4IV ACGT 3 cut(s) 744, 853, 879
HpyCH4V TGCA 4 cut(s) 862, 1027, 1186, 1264
HpyF10VI GCNNNNNNNGC 5 cut(s) 86, 281, 1037, 1267, 1276
HpyF3I CTNAG 6 cut(s) 26, 648, 998, 1047, 1221, 1272
HpySE526I ACGT 3 cut(s) 744, 853, 879
Hsp92II CATG 4 cut(s) 118, 173, 808, 1181
Ksp22I TGATCA 2 cut(s) 394, 610
Kzo9I GATC 9 cut(s) 22, 70, 140, 144, 394, 610, 709, 814, 982
Lsp1109I GCAGC 3 cut(s) 1245, 1248, 1263
LweI GCATC 4 cut(s) 787, 1014, 1227, 1273
MaeI CTAG 2 cut(s) 827, 1193
MaeII ACGT 3 cut(s) 744, 853, 879
MaeIII GTNAC 7 cut(s) 43, 604, 703, 745, 932, 988, 1195
MalI GATC 9 cut(s) 24, 72, 142, 146, 396, 612, 711, 816, 984
MboI GATC 9 cut(s) 22, 70, 140, 144, 394, 610, 709, 814, 982
MluCI AATT 8 cut(s) 159, 302, 429, 443, 642, 904, 945, 1181
MlyI GAGTC 3 cut(s) 51, 839, 1058
MnlI CCTC 9 cut(s) 265, 416, 426, 441, 508, 632, 751, 777, 868
MroXI GAANNNNTTC 1 cut(s) 81
MseI TTAA 2 cut(s) 1034, 1089
MspA1I CMGCKG 1 cut(s) 820
MspR9I CCNGG 1 cut(s) 1254
Mva1269I GAATGC 1 cut(s) 451
MvaI CCWGG 1 cut(s) 1254
MwoI GCNNNNNNNGC 5 cut(s) 86, 281, 1037, 1267, 1276
NcoI CCATGG 1 cut(s) 114
NdeII GATC 9 cut(s) 22, 70, 140, 144, 394, 610, 709, 814, 982
NlaIII CATG 4 cut(s) 118, 173, 808, 1181
NlaIV GGNNCC 1 cut(s) 1251
NmuCI GTSAC 3 cut(s) 43, 745, 932
PagI TCATGA 2 cut(s) 804, 1177
PasI CCCWGGG 1 cut(s) 1253
PceI AGGCCT 1 cut(s) 1040
PctI GAATGC 1 cut(s) 451
PdmI GAANNNNTTC 1 cut(s) 81
PfeI GAWTC 9 cut(s) 49, 56, 422, 437, 491, 767, 1004, 1174, 1208
PflFI GACNNNGTC 1 cut(s) 916
PkrI GCNGC 3 cut(s) 1260, 1263, 1278
PleI GAGTC 3 cut(s) 50, 838, 1057
PpsI GAGTC 3 cut(s) 50, 838, 1057
Psp6I CCWGG 1 cut(s) 1252
PspGI CCWGG 1 cut(s) 1252
PspN4I GGNNCC 1 cut(s) 1251
PspPI GGNCC 4 cut(s) 166, 403, 823, 1249
PsyI GACNNNGTC 1 cut(s) 916
PvuII CAGCTG 1 cut(s) 820
RsaI GTAC 2 cut(s) 181, 367
RsaNI GTAC 2 cut(s) 180, 366
SaqAI TTAA 2 cut(s) 1034, 1089
SatI GCNGC 3 cut(s) 1259, 1262, 1277
Sau3AI GATC 9 cut(s) 22, 70, 140, 144, 394, 610, 709, 814, 982
Sau96I GGNCC 4 cut(s) 166, 403, 823, 1249
ScaI AGTACT 1 cut(s) 367
SchI GAGTC 3 cut(s) 51, 839, 1058
ScrFI CCNGG 1 cut(s) 1254
SfaNI GCATC 4 cut(s) 787, 1014, 1227, 1273
SfcI CTRYAG 1 cut(s) 927
SinI GGWCC 1 cut(s) 823
SpeI ACTAGT 1 cut(s) 1192
Sse9I AATT 8 cut(s) 159, 302, 429, 443, 642, 904, 945, 1181
SseBI AGGCCT 1 cut(s) 1040
SsiI CCGC 1 cut(s) 232
SspI AATATT 1 cut(s) 716
SspMI CTAG 2 cut(s) 827, 1193
StuI AGGCCT 1 cut(s) 1040
StyD4I CCNGG 1 cut(s) 1252
StyI CCWWGG 1 cut(s) 114
TaaI ACNGT 2 cut(s) 365, 1201
TaiI ACGT 3 cut(s) 747, 856, 882
TaqI TCGA 3 cut(s) 143, 680, 985
TasI AATT 8 cut(s) 159, 302, 429, 443, 642, 904, 945, 1181
TatI WGTACW 1 cut(s) 365
TfiI GAWTC 9 cut(s) 49, 56, 422, 437, 491, 767, 1004, 1174, 1208
Tru1I TTAA 2 cut(s) 1034, 1089
Tru9I TTAA 2 cut(s) 1034, 1089
TscAI CASTG 3 cut(s) 142, 351, 534
TseFI GTSAC 3 cut(s) 43, 745, 932
TseI GCWGC 3 cut(s) 1258, 1261, 1276
Tsp45I GTSAC 3 cut(s) 43, 745, 932
TspDTI ATGAA 7 cut(s) 116, 312, 555, 780, 917, 1166, 1194
TspRI CASTG 3 cut(s) 142, 351, 534
Tth111I GACNNNGTC 1 cut(s) 916
VpaK11BI GGWCC 1 cut(s) 823
XapI RAATTY 2 cut(s) 904, 945
XmnI GAANNNNTTC 1 cut(s) 81
XspI CTAG 2 cut(s) 827, 1193
ZrmI AGTACT 1 cut(s) 367
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.