Prupe.1G141300_v2.0.a1

aspartic-type endopeptidase activity

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
Physical Location & Seq
Forward (+)
11109060 .. 11110549
1490 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G141300.1

Sequence Viewer

Length: 1323 bp
ATGGGCATATCGCTGCCCTCTCTCTTCTCCAACATTTTCTTCTTCTTGAACACCATCTTTATTCTTCAATCCATAAACTCTATCAGCAGCAGTACTGCTGGTGATGGCTTTTCTGTTCGTCTGATCCACCGTGACTCACCTCTATCCCCATCATACAATCATTCCATGACCGCCTATGATCGTATACATGCTGCTGCTTATCGTTCTGTCTTGCGGCTTAACCACATCCACTCACTCACCACCACCTTTTCATCCTCAGAACATGACATCTCTTCTAGAATAGTCCCTGAAAATGGTGAGTACATAGTGACTTTCTCTGTGGGTACTCCCCCTATCCAAGTACATGCCTTCATGGACACTGGAAGTGAGGTCATTTGGGTCAAATGCTCACAAAGCTCCCCTGTCTTCAACCCTGCAAAATCCTCCTCTTATGGTCACCATCCGTGTGATTCCCTTGCCTGTGAGGTTTTAGGGGTAGGCAGGAGAACCTGCGCAGAGTTTCTTGACCCTTGTTACTATAGGGTAAGATATGGAGATGGTTCCACAACGGAGGGAACTCTGTCCCATGACAAGTTTGCATTTGAAGACCCTGAGAGGAACCTTGTGGATGTTGGTCACTTGGATTTTGGTTGTTCTGACTTCTCTTCATGGCATTTTCGTGGGAACCAATCAGGGGCTCTTGGCCTGAGCCGGCAACCCCTGTCCTTAATTTCTCAACTAGGCATAAAAAAGTTCTCATACTGCATGGTGCTCCCTGACAATGAGGGATCAGGAAGCAGGATGTATTTTGGCTCAGAGGCAGTGATCTCTGGTGGGCAAACTCCACTTCTGAAGGGAGTGGATTGGTATTACTATGTCACTCTTATTGGAATTAGCATTGGTGACCAAAATGTACCTCTCCCTGATGGGATTTTTAACATGACAAGTGATGGGAAAGGAGGGTTTATTATTGATTCAGGCACAACTTACACATTCCTTAGATCAGAAGCATATGATGCATTGATCGAGGCACTCGGGGAAGCCATAGATTTGCCTCAAAGGAGAGGACCAAGCCAATGGTATGAGTTGTGTTTTGAGGGAAGTTTTGAGGACTTGGATTCTGCAGCACCAGATTTGAAATTCATTTTTGATGGTGCAGAAGTCATTCTAATGAAACAAACTACTTACATTGAAGCAGAGAAGGGGCTTTGGTGCCTTGCCATGGTGAGGTCCAATGAAGAGTTGTCCATACTGGGAAATATGCAACAACAGAACTATTTTGTTGGTTATGACCTTGAACAAGAAGTGGTTTCTTTTGCTCCAGTTGACTGTGCTACCTTCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0001540 GO:0003008 GO:0003674 GO:0003824 GO:0004175 GO:0004190 GO:0005488 GO:0005515 GO:0005575 GO:0005576 GO:0005622 GO:0005623 GO:0005737 GO:0005768 GO:0005769 GO:0005770 GO:0005771 GO:0005783 GO:0005788 GO:0005794 GO:0005798 GO:0005802 GO:0005886 GO:0005887 GO:0006508 GO:0006509 GO:0006518 GO:0006807 GO:0007610 GO:0007611 GO:0007613 GO:0008150 GO:0008152 GO:0008233 GO:0008238 GO:0008242 GO:0008798 GO:0009056 GO:0009057 GO:0009889 GO:0009890 GO:0009892 GO:0009986 GO:0009987 GO:0010008 GO:0010467 GO:0010556 GO:0010558 GO:0010559 GO:0010561 GO:0010605 GO:0010646 GO:0010817 GO:0012505 GO:0016020 GO:0016021 GO:0016485 GO:0016486 GO:0016787 GO:0019222 GO:0019538 GO:0019899 GO:0023051 GO:0030163 GO:0030424 GO:0031090 GO:0031224 GO:0031226 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0031410 GO:0031974 GO:0031982 GO:0031983 GO:0031984 GO:0032501 GO:0033218 GO:0033619 GO:0034641 GO:0042277 GO:0042445 GO:0042984 GO:0042985 GO:0042995 GO:0043005 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043603 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044425 GO:0044431 GO:0044432 GO:0044433 GO:0044440 GO:0044444 GO:0044446 GO:0044459 GO:0044464 GO:0048167 GO:0048519 GO:0048523 GO:0050435 GO:0050789 GO:0050794 GO:0050804 GO:0050877 GO:0050890 GO:0051171 GO:0051172 GO:0051246 GO:0051248 GO:0051604 GO:0060205 GO:0060255 GO:0065007 GO:0065008 GO:0070001 GO:0070011 GO:0070013 GO:0070931 GO:0071704 GO:0071944 GO:0080090 GO:0097458 GO:0097708 GO:0098588 GO:0098791 GO:0098805 GO:0099177 GO:0120025 GO:0140096 GO:1901564 GO:1901565 GO:1901575 GO:1903018 GO:1903019 GO:2000112 GO:2000113
Pfam Domains
Protein Families

Protein Analysis

441

Amino Acids

48.6

Weight (kDa)

4.79

Isoelectric Point (pI)

48.61

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0024596)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 493
Acc36I ACCTGC 1 cut(s) 497
AccB1I GGYRCC 1 cut(s) 1191
AccI GTMKAC 1 cut(s) 184
AciI CCGC 2 cut(s) 171, 214
AclWI GGATC 2 cut(s) 118, 775
AcsI RAATTY 1 cut(s) 1118
AcuI CTGAAG 1 cut(s) 851
AfaI GTAC 5 cut(s) 94, 302, 325, 342, 894
AfiI CCNNNNNNNGG 4 cut(s) 293, 673, 1201, 1206
AgsI TTSAA 7 cut(s) 49, 68, 409, 584, 1117, 1172, 1277
AjuI GAANNNNNNNTTGG 2 cut(s) 23, 55
AluBI AGCT 1 cut(s) 396
AluI AGCT 1 cut(s) 396
Alw21I GWGCWC 1 cut(s) 753
AlwI GGATC 2 cut(s) 118, 775
Ama87I CYCGRG 1 cut(s) 1013
AoxI GGCC 1 cut(s) 682
ApeKI GCWGC 5 cut(s) 13, 87, 191, 194, 1103
ApoI RAATTY 1 cut(s) 1118
Asp700I GAANNNNTTC 1 cut(s) 1143
AspLEI GCGC 1 cut(s) 494
AspS9I GGNCC 2 cut(s) 1046, 1209
AsuHPI GGTGA 7 cut(s) 113, 129, 229, 308, 428, 893, 1216
AvaI CYCGRG 1 cut(s) 1013
AvaII GGWCC 2 cut(s) 1046, 1209
BanI GGYRCC 1 cut(s) 1191
BanII GRGCYC 1 cut(s) 679
BbsI GAAGAC 2 cut(s) 397, 591
Bbv12I GWGCWC 1 cut(s) 753
BbvI GCAGC 4 cut(s) 99, 178, 181, 1115
BccI CCATC 8 cut(s) 62, 98, 157, 447, 530, 899, 923, 1124
BfaI CTAG 3 cut(s) 276, 719, 1321
BfmI CTRYAG 2 cut(s) 517, 1101
BfuAI ACCTGC 1 cut(s) 497
BisI GCNGC 6 cut(s) 14, 88, 192, 195, 215, 1104
BlsI GCNGC 6 cut(s) 15, 89, 193, 196, 216, 1105
BmcAI AGTACT 1 cut(s) 94
Bme18I GGWCC 2 cut(s) 1046, 1209
BmeT110I CYCGRG 1 cut(s) 1013
BmgT120I GGNCC 2 cut(s) 1046, 1209
BmiI GGNNCC 4 cut(s) 541, 599, 665, 1193
BmrI ACTGGG 1 cut(s) 1241
BmsI GCATC 1 cut(s) 985
BmuI ACTGGG 1 cut(s) 1241
BpiI GAAGAC 2 cut(s) 397, 591
BpmI CTGGAG 1 cut(s) 1284
Bpu10I CCTNAGC 1 cut(s) 686
BsaJI CCNNGG 1 cut(s) 1200
Bsc4I CCNNNNNNNGG 4 cut(s) 293, 673, 1201, 1206
Bse118I RCCGGY 1 cut(s) 690
Bse1I ACTGG 3 cut(s) 364, 1236, 1301
BseDI CCNNGG 1 cut(s) 1200
BseGI GGATG 5 cut(s) 225, 251, 439, 613, 786
BseLI CCNNNNNNNGG 4 cut(s) 293, 673, 1201, 1206
BseMII CTCAG 4 cut(s) 270, 582, 677, 807
BseNI ACTGG 3 cut(s) 364, 1236, 1301
BseRI GAGGAG 1 cut(s) 415
BseXI GCAGC 4 cut(s) 99, 178, 181, 1115
BsgI GTGCAG 1 cut(s) 1155
BshFI GGCC 1 cut(s) 684
BshNI GGYRCC 1 cut(s) 1191
BsiHKAI GWGCWC 1 cut(s) 753
BsiHKCI CYCGRG 1 cut(s) 1013
BsiSI CCGG 1 cut(s) 691
BslFI GGGAC 2 cut(s) 269, 547
BslI CCNNNNNNNGG 4 cut(s) 293, 673, 1201, 1206
BsmFI GGGAC 2 cut(s) 269, 547
BsnI GGCC 1 cut(s) 684
BsoBI CYCGRG 1 cut(s) 1013
Bsp1286I GDGCHC 2 cut(s) 679, 753
Bsp143I GATC 6 cut(s) 123, 178, 767, 804, 980, 1002
Bsp19I CCATGG 1 cut(s) 1200
BspACI CCGC 2 cut(s) 171, 214
BspANI GGCC 1 cut(s) 684
BspCNI CTCAG 4 cut(s) 269, 583, 678, 806
BspLI GGNNCC 4 cut(s) 541, 599, 665, 1193
BspMAI CTGCAG 1 cut(s) 1105
BspMI ACCTGC 1 cut(s) 497
BspPI GGATC 2 cut(s) 118, 775
BspT107I GGYRCC 1 cut(s) 1191
BsrFI RCCGGY 1 cut(s) 690
BsrI ACTGG 3 cut(s) 364, 1236, 1301
BssAI RCCGGY 1 cut(s) 690
BssECI CCNNGG 1 cut(s) 1200
BssMI GATC 6 cut(s) 123, 178, 767, 804, 980, 1002
BssNAI GTATAC 1 cut(s) 185
BssT1I CCWWGG 1 cut(s) 1200
Bst1107I GTATAC 1 cut(s) 185
Bst4CI ACNGT 2 cut(s) 131, 1310
Bst6I CTCTTC 4 cut(s) 29, 277, 649, 1212
BstAPI GCANNNNNTGC 1 cut(s) 995
BstC8I GCNNGC 1 cut(s) 692
BstDEI CTNAG 5 cut(s) 256, 591, 686, 793, 977
BstDSI CCRYGG 1 cut(s) 1200
BstEII GGTNACC 2 cut(s) 434, 881
BstF5I GGATG 5 cut(s) 225, 251, 439, 613, 786
BstHHI GCGC 1 cut(s) 494
BstKTI GATC 6 cut(s) 126, 181, 770, 807, 983, 1005
BstMBI GATC 6 cut(s) 123, 178, 767, 804, 980, 1002
BstMWI GCNNNNNNNGC 2 cut(s) 393, 995
BstNSI RCATGY 2 cut(s) 191, 347
BstPI GGTNACC 2 cut(s) 434, 881
BstSFI CTRYAG 2 cut(s) 517, 1101
BstV1I GCAGC 4 cut(s) 99, 178, 181, 1115
BstV2I GAAGAC 2 cut(s) 397, 591
BstXI CCANNNNNNTGG 1 cut(s) 1056
BstZ17I GTATAC 1 cut(s) 185
BsuRI GGCC 1 cut(s) 684
BtgI CCRYGG 1 cut(s) 1200
BtsCI GGATG 5 cut(s) 225, 251, 439, 613, 786
BtsI GCAGTG 1 cut(s) 807
BtsIMutI CAGTG 2 cut(s) 357, 807
BveI ACCTGC 1 cut(s) 497
Cac8I GCNNGC 1 cut(s) 692
CfoI GCGC 1 cut(s) 494
Cfr10I RCCGGY 1 cut(s) 690
Cfr13I GGNCC 2 cut(s) 1046, 1209
Csp6I GTAC 5 cut(s) 93, 301, 324, 341, 893
CviQI GTAC 5 cut(s) 93, 301, 324, 341, 893
DdeI CTNAG 5 cut(s) 256, 591, 686, 793, 977
DpnI GATC 6 cut(s) 125, 180, 769, 806, 982, 1004
DpnII GATC 6 cut(s) 123, 178, 767, 804, 980, 1002
Eam1104I CTCTTC 4 cut(s) 29, 277, 649, 1212
EarI CTCTTC 4 cut(s) 29, 277, 649, 1212
Eco130I CCWWGG 1 cut(s) 1200
Eco24I GRGCYC 1 cut(s) 679
Eco47I GGWCC 2 cut(s) 1046, 1209
Eco57I CTGAAG 1 cut(s) 851
Eco88I CYCGRG 1 cut(s) 1013
Eco91I GGTNACC 2 cut(s) 434, 881
EcoO65I GGTNACC 2 cut(s) 434, 881
EcoT14I CCWWGG 1 cut(s) 1200
EcoT22I ATGCAT 1 cut(s) 1000
EcoT38I GRGCYC 1 cut(s) 679
ErhI CCWWGG 1 cut(s) 1200
FaqI GGGAC 2 cut(s) 269, 547
FauNDI CATATG 1 cut(s) 991
FblI GTMKAC 1 cut(s) 184
Fnu4HI GCNGC 6 cut(s) 14, 88, 192, 195, 215, 1104
FokI GGATG 5 cut(s) 212, 238, 426, 620, 793
FriOI GRGCYC 1 cut(s) 679
Fsp4HI GCNGC 6 cut(s) 14, 88, 192, 195, 215, 1104
FspBI CTAG 3 cut(s) 276, 719, 1321
FspI TGCGCA 1 cut(s) 493
GlaI GCGC 1 cut(s) 493
GluI GCNGC 6 cut(s) 14, 88, 192, 195, 215, 1104
GsuI CTGGAG 1 cut(s) 1284
HaeIII GGCC 1 cut(s) 684
HapII CCGG 1 cut(s) 691
HhaI GCGC 1 cut(s) 494
Hin6I GCGC 1 cut(s) 492
HinP1I GCGC 1 cut(s) 492
HincII GTYRAC 1 cut(s) 1306
HindII GTYRAC 1 cut(s) 1306
HinfI GANTC 4 cut(s) 134, 449, 953, 1097
HpaII CCGG 1 cut(s) 691
HphI GGTGA 7 cut(s) 113, 129, 229, 308, 428, 893, 1216
Hpy166II GTNNAC 2 cut(s) 185, 1306
Hpy188I TCNGA 6 cut(s) 123, 259, 637, 796, 831, 985
Hpy188III TCNNGA 4 cut(s) 46, 276, 503, 771
Hpy8I GTNNAC 2 cut(s) 185, 1306
HpyAV CCTTC 3 cut(s) 358, 826, 1174
HpyCH4III ACNGT 2 cut(s) 131, 1310
HpyCH4V TGCA 7 cut(s) 416, 578, 744, 998, 1103, 1136, 1243
HpyF10VI GCNNNNNNNGC 2 cut(s) 393, 995
HpyF3I CTNAG 5 cut(s) 256, 591, 686, 793, 977
HspAI GCGC 1 cut(s) 492
KroI GCCGGC 1 cut(s) 690
KroNI GCCGGC 1 cut(s) 692
Kzo9I GATC 6 cut(s) 123, 178, 767, 804, 980, 1002
LmnI GCTCC 3 cut(s) 401, 756, 1303
Lsp1109I GCAGC 4 cut(s) 99, 178, 181, 1115
LweI GCATC 1 cut(s) 985
MaeI CTAG 3 cut(s) 276, 719, 1321
MaeIII GTNAC 7 cut(s) 131, 307, 434, 512, 614, 856, 881
MalI GATC 6 cut(s) 125, 180, 769, 806, 982, 1004
MboI GATC 6 cut(s) 123, 178, 767, 804, 980, 1002
MboII GAAGA 9 cut(s) 16, 31, 34, 56, 264, 397, 596, 636, 1229
MhlI GDGCHC 2 cut(s) 679, 753
MluCI AATT 3 cut(s) 708, 870, 1118
MlyI GAGTC 1 cut(s) 128
MmeI TCCRAC 1 cut(s) 54
Mph1103I ATGCAT 1 cut(s) 1000
MroNI GCCGGC 1 cut(s) 690
MroXI GAANNNNTTC 1 cut(s) 1143
MseI TTAA 3 cut(s) 219, 707, 915
MslI CAYNNNNRTG 3 cut(s) 444, 657, 1148
MspI CCGG 1 cut(s) 691
MwoI GCNNNNNNNGC 2 cut(s) 393, 995
NaeI GCCGGC 1 cut(s) 692
NcoI CCATGG 1 cut(s) 1200
NdeI CATATG 1 cut(s) 991
NdeII GATC 6 cut(s) 123, 178, 767, 804, 980, 1002
NgoMIV GCCGGC 1 cut(s) 690
NlaIV GGNNCC 4 cut(s) 541, 599, 665, 1193
NmuCI GTSAC 6 cut(s) 131, 307, 434, 614, 856, 881
NsbI TGCGCA 1 cut(s) 493
NsiI ATGCAT 1 cut(s) 1000
NspI RCATGY 2 cut(s) 191, 347
PdiI GCCGGC 1 cut(s) 692
PdmI GAANNNNTTC 1 cut(s) 1143
PfeI GAWTC 3 cut(s) 449, 953, 1097
PkrI GCNGC 6 cut(s) 15, 89, 193, 196, 216, 1105
PleI GAGTC 1 cut(s) 128
PpsI GAGTC 1 cut(s) 128
PspEI GGTNACC 2 cut(s) 434, 881
PspN4I GGNNCC 4 cut(s) 541, 599, 665, 1193
PspPI GGNCC 2 cut(s) 1046, 1209
PstI CTGCAG 1 cut(s) 1105
RsaI GTAC 5 cut(s) 94, 302, 325, 342, 894
RsaNI GTAC 5 cut(s) 93, 301, 324, 341, 893
RseI CAYNNNNRTG 3 cut(s) 444, 657, 1148
SaqAI TTAA 3 cut(s) 219, 707, 915
SatI GCNGC 6 cut(s) 14, 88, 192, 195, 215, 1104
Sau3AI GATC 6 cut(s) 123, 178, 767, 804, 980, 1002
Sau96I GGNCC 2 cut(s) 1046, 1209
ScaI AGTACT 1 cut(s) 94
SchI GAGTC 1 cut(s) 128
SduI GDGCHC 2 cut(s) 679, 753
SfaNI GCATC 1 cut(s) 985
SfcI CTRYAG 2 cut(s) 517, 1101
SinI GGWCC 2 cut(s) 1046, 1209
SmiMI CAYNNNNRTG 3 cut(s) 444, 657, 1148
Sse9I AATT 3 cut(s) 708, 870, 1118
SsiI CCGC 2 cut(s) 171, 214
SspMI CTAG 3 cut(s) 276, 719, 1321
StyI CCWWGG 1 cut(s) 1200
TaaI ACNGT 2 cut(s) 131, 1310
TaqI TCGA 1 cut(s) 1005
TasI AATT 3 cut(s) 708, 870, 1118
TatI WGTACW 3 cut(s) 92, 300, 340
TauI GCSGC 1 cut(s) 217
TfiI GAWTC 3 cut(s) 449, 953, 1097
Tru1I TTAA 3 cut(s) 219, 707, 915
Tru9I TTAA 3 cut(s) 219, 707, 915
TscAI CASTG 2 cut(s) 364, 807
TseFI GTSAC 6 cut(s) 131, 307, 434, 614, 856, 881
TseI GCWGC 5 cut(s) 13, 87, 191, 194, 1103
Tsp45I GTSAC 6 cut(s) 131, 307, 434, 614, 856, 881
TspDTI ATGAA 6 cut(s) 240, 340, 636, 1111, 1166, 1230
TspGWI ACGGA 2 cut(s) 432, 563
TspRI CASTG 2 cut(s) 364, 807
VpaK11BI GGWCC 2 cut(s) 1046, 1209
XapI RAATTY 1 cut(s) 1118
XbaI TCTAGA 1 cut(s) 275
XceI RCATGY 2 cut(s) 191, 347
XmiI GTMKAC 1 cut(s) 184
XmnI GAANNNNTTC 1 cut(s) 1143
XspI CTAG 3 cut(s) 276, 719, 1321
ZrmI AGTACT 1 cut(s) 94
Zsp2I ATGCAT 1 cut(s) 1000
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.