Prupe.1G158000_v2.0.a1

F-box LRR-repeat protein

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
Physical Location & Seq
Forward (+)
12541680 .. 12543556
1877 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G158000.1

Sequence Viewer

Length: 834 bp
ATGGATCAAAGAAGATGGGAGGACTTAGACGTGGACTGTTTGTTGATTGTGTTGGGAAAAGTTGGAATGGAGTCGCTGCTTTTGGGTGTCCCTTTTGTGTGCAAGTCATGGTACAAAGCAAGCCTCGATCCTTCATTCTGGCAATGTCTCATATTACCGGACTTTCATGATGGTTTTATGGTTGCTCGGTTTTCTTATTTTGCAAAAAATCAATTTTGGATCGCTACTCCCTTTTATAGAAAATTCATACGTCAGTACCGAATGAGTAAGTACCGTTTCTCCATGACTGGTTTTGTAAAGCTTGTTGTTAGTCGTAGCTGTGGAAATGCTACTTCTCTGAGCCTACCTGAATGTTCAAACAGACTACTGAGATTAGTCGCAAATACGTGTCCTAGCCTCAAGGCTTTGACTTTGCCTAGAAATTTCGTGTTACGGGAATCAAGCATAATTATGGAACTGACTGAAAAGTTGAAACATTTGGAGTCATTGTCTTTGGGAAACGACATAGATATTACTGAAATTCTTTCACAGATCAGCCTTCACTGCAAGAACTTTCGTAGGTTAGACGTCTTTCGTGCTTCATTATGTAAAGATAAGGCATTGTCGATTGTCAAGTTCGTACCTAATATTGAATACTTAAGCTTGAGGAGGGCAATCATTCGTCGGTGCGATCTCATCACAATACTGCAGGGATGTAGGGAGCTTGTGTTTTTGGATGTCAGTGGTACTGGTTTTGATGAGGGTGACCATGAAATATCAATGTTTGCTTCTCATATTTCTAATTTTAGGTGTAAGGGTTTGATGCATGACAAAATATGTGGTGTGAAAAATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

278

Amino Acids

31.9

Weight (kDa)

9.08

Isoelectric Point (pI)

46.35

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0029167)

Species Orthologous Gene IDs
prunus_persica Prupe.1G157700_v2.0.a1 Prupe.1G158000_v2.0.a1

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 570
AclWI GGATC 3 cut(s) 12, 122, 227
AcsI RAATTY 3 cut(s) 242, 421, 519
AcyI GRCGYC 1 cut(s) 567
AfaI GTAC 5 cut(s) 113, 257, 272, 621, 727
AflII CTTAAG 1 cut(s) 637
AflIII ACRYGT 1 cut(s) 386
AgsI TTSAA 3 cut(s) 357, 472, 632
AjiI CACGTC 1 cut(s) 31
AluBI AGCT 4 cut(s) 301, 318, 642, 703
AluI AGCT 4 cut(s) 301, 318, 642, 703
Alw26I GTCTC 1 cut(s) 152
AlwI GGATC 3 cut(s) 12, 122, 227
ApeKI GCWGC 1 cut(s) 76
ApoI RAATTY 3 cut(s) 242, 421, 519
AsuHPI GGTGA 1 cut(s) 755
BaeI ACNNNNGTAYC 2 cut(s) 239, 272
BbvI GCAGC 1 cut(s) 63
BccI CCATC 2 cut(s) 9, 164
BcoDI GTCTC 1 cut(s) 152
BfaI CTAG 2 cut(s) 393, 417
BfmI CTRYAG 1 cut(s) 686
BfrI CTTAAG 1 cut(s) 637
BisI GCNGC 1 cut(s) 77
BlsI GCNGC 1 cut(s) 78
BmgBI CACGTC 1 cut(s) 31
BmsI GCATC 1 cut(s) 792
BpuEI CTTGAG 2 cut(s) 383, 664
BsaAI YACGTR 1 cut(s) 387
BsaHI GRCGYC 1 cut(s) 567
BsaWI WCCGGW 1 cut(s) 157
BsaXI ACNNNNNCTCC 6 cut(s) 263, 293, 473, 503, 692, 722
Bse1I ACTGG 2 cut(s) 292, 733
Bse3DI GCAATG 1 cut(s) 149
BseGI GGATG 2 cut(s) 698, 721
BseMI GCAATG 1 cut(s) 149
BseMII CTCAG 2 cut(s) 329, 359
BseNI ACTGG 2 cut(s) 292, 733
BseRI GAGGAG 1 cut(s) 661
BseXI GCAGC 1 cut(s) 63
BsiSI CCGG 1 cut(s) 158
BslFI GGGAC 1 cut(s) 74
BsmAI GTCTC 1 cut(s) 152
BsmFI GGGAC 1 cut(s) 74
Bsp143I GATC 5 cut(s) 4, 127, 219, 531, 670
BspCNI CTCAG 2 cut(s) 330, 360
BspHI TCATGA 1 cut(s) 166
BspMAI CTGCAG 1 cut(s) 690
BspPI GGATC 3 cut(s) 12, 122, 227
BspTI CTTAAG 1 cut(s) 637
BsrDI GCAATG 1 cut(s) 149
BsrI ACTGG 2 cut(s) 292, 733
BssMI GATC 5 cut(s) 4, 127, 219, 531, 670
BssNI GRCGYC 1 cut(s) 567
Bst4CI ACNGT 2 cut(s) 38, 275
BstACI GRCGYC 1 cut(s) 567
BstAFI CTTAAG 1 cut(s) 637
BstBAI YACGTR 1 cut(s) 387
BstC8I GCNNGC 1 cut(s) 121
BstDEI CTNAG 3 cut(s) 25, 338, 368
BstEII GGTNACC 1 cut(s) 743
BstF5I GGATG 2 cut(s) 698, 721
BstKTI GATC 5 cut(s) 7, 130, 222, 534, 673
BstMAI GTCTC 1 cut(s) 152
BstMBI GATC 5 cut(s) 4, 127, 219, 531, 670
BstMWI GCNNNNNNNGC 1 cut(s) 543
BstPI GGTNACC 1 cut(s) 743
BstSFI CTRYAG 1 cut(s) 686
BstV1I GCAGC 1 cut(s) 63
BtrI CACGTC 1 cut(s) 31
BtsCI GGATG 2 cut(s) 698, 721
BtsI GCAGTG 1 cut(s) 541
BtsIMutI CAGTG 2 cut(s) 541, 727
Cac8I GCNNGC 1 cut(s) 121
CciI TCATGA 1 cut(s) 166
Csp6I GTAC 5 cut(s) 112, 256, 271, 620, 726
CspCI CAANNNNNGTGG 2 cut(s) 799, 834
CviAII CATG 5 cut(s) 108, 167, 283, 749, 806
CviJI RGCY 9 cut(s) 123, 301, 318, 342, 396, 404, 537, 642, 703
CviKI_1 RGCY 9 cut(s) 123, 301, 318, 342, 396, 404, 537, 642, 703
CviQI GTAC 5 cut(s) 112, 256, 271, 620, 726
DdeI CTNAG 3 cut(s) 25, 338, 368
DpnI GATC 5 cut(s) 6, 129, 221, 533, 672
DpnII GATC 5 cut(s) 4, 127, 219, 531, 670
Eco91I GGTNACC 1 cut(s) 743
EcoO65I GGTNACC 1 cut(s) 743
EcoT22I ATGCAT 1 cut(s) 807
FaeI CATG 5 cut(s) 111, 170, 286, 752, 809
FaqI GGGAC 1 cut(s) 74
FatI CATG 5 cut(s) 107, 166, 282, 748, 805
Fnu4HI GCNGC 1 cut(s) 77
FokI GGATG 2 cut(s) 705, 728
Fsp4HI GCNGC 1 cut(s) 77
FspBI CTAG 2 cut(s) 393, 417
GluI GCNGC 1 cut(s) 77
HapII CCGG 1 cut(s) 158
Hin1I GRCGYC 1 cut(s) 567
Hin1II CATG 5 cut(s) 111, 170, 286, 752, 809
HindIII AAGCTT 2 cut(s) 299, 640
HinfI GANTC 3 cut(s) 71, 437, 482
HpaII CCGG 1 cut(s) 158
HphI GGTGA 1 cut(s) 755
Hpy166II GTNNAC 1 cut(s) 34
Hpy188I TCNGA 1 cut(s) 339
Hpy188III TCNNGA 1 cut(s) 167
Hpy8I GTNNAC 1 cut(s) 34
Hpy99I CGWCG 1 cut(s) 666
HpyAV CCTTC 2 cut(s) 141, 548
HpyCH4III ACNGT 2 cut(s) 38, 275
HpyCH4IV ACGT 4 cut(s) 30, 250, 386, 567
HpyCH4V TGCA 5 cut(s) 102, 203, 546, 688, 805
HpyF10VI GCNNNNNNNGC 1 cut(s) 543
HpyF3I CTNAG 3 cut(s) 25, 338, 368
HpySE526I ACGT 4 cut(s) 30, 250, 386, 567
Hsp92I GRCGYC 1 cut(s) 567
Hsp92II CATG 5 cut(s) 111, 170, 286, 752, 809
Kzo9I GATC 5 cut(s) 4, 127, 219, 531, 670
LmnI GCTCC 1 cut(s) 700
LpnPI CCDG 6 cut(s) 124, 171, 273, 360, 674, 714
Lsp1109I GCAGC 1 cut(s) 63
LweI GCATC 1 cut(s) 792
MaeI CTAG 2 cut(s) 393, 417
MaeII ACGT 4 cut(s) 30, 250, 386, 567
MaeIII GTNAC 2 cut(s) 429, 743
MalI GATC 5 cut(s) 6, 129, 221, 533, 672
MboI GATC 5 cut(s) 4, 127, 219, 531, 670
MboII GAAGA 1 cut(s) 24
MluCI AATT 7 cut(s) 212, 242, 421, 447, 519, 781, 829
MlyI GAGTC 2 cut(s) 80, 491
MmeI TCCRAC 1 cut(s) 43
MnlI CCTC 6 cut(s) 13, 134, 407, 639, 642, 733
Mph1103I ATGCAT 1 cut(s) 807
MseI TTAA 2 cut(s) 638, 832
MslI CAYNNNNRTG 1 cut(s) 449
MspCI CTTAAG 1 cut(s) 637
MspI CCGG 1 cut(s) 158
MwoI GCNNNNNNNGC 1 cut(s) 543
NdeII GATC 5 cut(s) 4, 127, 219, 531, 670
NlaIII CATG 5 cut(s) 111, 170, 286, 752, 809
NmuCI GTSAC 1 cut(s) 743
NsiI ATGCAT 1 cut(s) 807
PagI TCATGA 1 cut(s) 166
PcsI WCGNNNNNNNCGW 1 cut(s) 256
PfeI GAWTC 1 cut(s) 437
PkrI GCNGC 1 cut(s) 78
PleI GAGTC 2 cut(s) 79, 490
PpsI GAGTC 2 cut(s) 79, 490
Ppu21I YACGTR 1 cut(s) 387
PspEI GGTNACC 1 cut(s) 743
PstI CTGCAG 1 cut(s) 690
RsaI GTAC 5 cut(s) 113, 257, 272, 621, 727
RsaNI GTAC 5 cut(s) 112, 256, 271, 620, 726
RseI CAYNNNNRTG 1 cut(s) 449
SaqAI TTAA 2 cut(s) 638, 832
SatI GCNGC 1 cut(s) 77
Sau3AI GATC 5 cut(s) 4, 127, 219, 531, 670
SchI GAGTC 2 cut(s) 80, 491
SfaNI GCATC 1 cut(s) 792
SfcI CTRYAG 1 cut(s) 686
SmiMI CAYNNNNRTG 1 cut(s) 449
SmlI CTYRAG 3 cut(s) 398, 637, 643
SmoI CTYRAG 3 cut(s) 398, 637, 643
Sse9I AATT 7 cut(s) 212, 242, 421, 447, 519, 781, 829
SspI AATATT 1 cut(s) 628
SspMI CTAG 2 cut(s) 393, 417
TaaI ACNGT 2 cut(s) 38, 275
TaiI ACGT 4 cut(s) 33, 253, 389, 570
TaqI TCGA 2 cut(s) 126, 605
TasI AATT 7 cut(s) 212, 242, 421, 447, 519, 781, 829
TfiI GAWTC 1 cut(s) 437
Tru1I TTAA 2 cut(s) 638, 832
Tru9I TTAA 2 cut(s) 638, 832
TscAI CASTG 2 cut(s) 548, 727
TseFI GTSAC 1 cut(s) 743
TseI GCWGC 1 cut(s) 76
Tsp45I GTSAC 1 cut(s) 743
TspDTI ATGAA 5 cut(s) 123, 155, 235, 570, 765
TspRI CASTG 2 cut(s) 548, 727
Vha464I CTTAAG 1 cut(s) 637
XapI RAATTY 3 cut(s) 242, 421, 519
XspI CTAG 2 cut(s) 393, 417
ZraI GACGTC 1 cut(s) 568
Zsp2I ATGCAT 1 cut(s) 807
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.