Prupe.1G162000_v2.0.a1

receptor-like serine threonine-protein kinase At5g57670

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
Physical Location & Seq
Reverse (-)
12978062 .. 12978451
390 bp
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UTR
Exon/CDS
Intron
Prupe.1G162000.1

Sequence Viewer

Length: 246 bp
CGTCCGTGCACTCCTCCTCGTCAGTTTTCCATTGAAGACTCTCTCTGTGCCAAAGAAATTGTGGATCAAGATGGGAAGTCGTCACTTCTTTCCCCTGTGAAAGCGTTCGACTCTGTTGTTCTTGCCATCTATGAAGGTTTCTGCAACTTGAAACAGGTTCATTTCTCGCAAATTTTTGTTCTTTTATTCGTTGGGATTTTGTTGTCCTTTTGTATATTTAGTTATATCCTCTGGTTGTTTGCTTAG

Protein Analysis

82

Amino Acids

9.16

Weight (kDa)

5.61

Isoelectric Point (pI)

51.16

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0024579)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AclWI GGATC 1 cut(s) 72
AcsI RAATTY 1 cut(s) 171
AgsI TTSAA 2 cut(s) 35, 151
Alw21I GWGCWC 1 cut(s) 11
Alw44I GTGCAC 1 cut(s) 7
AlwI GGATC 1 cut(s) 72
ApaLI GTGCAC 1 cut(s) 7
ApoI RAATTY 1 cut(s) 171
Asp700I GAANNNNTTC 1 cut(s) 104
BaeGI GKGCMC 1 cut(s) 11
BbsI GAAGAC 1 cut(s) 42
Bbv12I GWGCWC 1 cut(s) 11
BccI CCATC 2 cut(s) 65, 134
BpiI GAAGAC 1 cut(s) 42
BseRI GAGGAG 1 cut(s) 6
BseSI GKGCMC 1 cut(s) 11
BsiHKAI GWGCWC 1 cut(s) 11
Bsp1286I GDGCHC 1 cut(s) 11
Bsp143I GATC 1 cut(s) 64
BspPI GGATC 1 cut(s) 72
BssMI GATC 1 cut(s) 64
BstDEI CTNAG 1 cut(s) 243
BstKTI GATC 1 cut(s) 67
BstMBI GATC 1 cut(s) 64
BstSLI GKGCMC 1 cut(s) 11
BstV2I GAAGAC 1 cut(s) 42
DdeI CTNAG 1 cut(s) 243
DpnI GATC 1 cut(s) 66
DpnII GATC 1 cut(s) 64
FaiI YATR 3 cut(s) 132, 215, 225
HinfI GANTC 2 cut(s) 38, 110
Hpy166II GTNNAC 1 cut(s) 9
Hpy188III TCNNGA 1 cut(s) 68
Hpy8I GTNNAC 1 cut(s) 9
HpyAV CCTTC 1 cut(s) 128
HpyCH4V TGCA 2 cut(s) 9, 144
HpyF3I CTNAG 1 cut(s) 243
Kzo9I GATC 1 cut(s) 64
LpnPI CCDG 3 cut(s) 108, 140, 217
MaeIII GTNAC 1 cut(s) 81
MalI GATC 1 cut(s) 66
MboI GATC 1 cut(s) 64
MboII GAAGA 1 cut(s) 47
MhlI GDGCHC 1 cut(s) 11
MluCI AATT 2 cut(s) 57, 171
MlyI GAGTC 2 cut(s) 32, 104
MnlI CCTC 3 cut(s) 24, 27, 239
MroXI GAANNNNTTC 1 cut(s) 104
NdeII GATC 1 cut(s) 64
NmuCI GTSAC 1 cut(s) 81
PdmI GAANNNNTTC 1 cut(s) 104
PleI GAGTC 2 cut(s) 32, 104
PpsI GAGTC 2 cut(s) 32, 104
Sau3AI GATC 1 cut(s) 64
SchI GAGTC 2 cut(s) 32, 104
SduI GDGCHC 1 cut(s) 11
SetI ASST 2 cut(s) 139, 159
SgeI CNNG 8 cut(s) 18, 30, 80, 107, 134, 160, 167, 178
Sse9I AATT 2 cut(s) 57, 171
TaqI TCGA 1 cut(s) 108
TasI AATT 2 cut(s) 57, 171
TseFI GTSAC 1 cut(s) 81
Tsp45I GTSAC 1 cut(s) 81
TspDTI ATGAA 2 cut(s) 147, 149
VneI GTGCAC 1 cut(s) 7
XapI RAATTY 1 cut(s) 171
XcmI CCANNNNNNNNNTGG 1 cut(s) 58
XmnI GAANNNNTTC 1 cut(s) 104
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.