Belongs to the GRAS family
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| Species | Orthologous Gene IDs |
|---|---|
| malus_domestica | MD04G1046000.v1.1 |
| prunus_persica | Prupe.1G199300_v2.0.a1 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 1321 |
| Acc65I | GGTACC | 1 cut(s) | 1227 |
| AccB1I | GGYRCC | 2 cut(s) | 485, 1227 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 676 |
| AciI | CCGC | 1 cut(s) | 605 |
| AclWI | GGATC | 2 cut(s) | 771, 844 |
| AcoI | YGGCCR | 2 cut(s) | 171, 582 |
| AcuI | CTGAAG | 1 cut(s) | 1178 |
| AcyI | GRCGYC | 1 cut(s) | 602 |
| AfaI | GTAC | 2 cut(s) | 56, 1229 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 148, 676, 1262 |
| AflII | CTTAAG | 1 cut(s) | 814 |
| AgsI | TTSAA | 6 cut(s) | 268, 480, 827, 833, 896, 953 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 465 |
| AjnI | CCWGG | 1 cut(s) | 416 |
| AleI | CACNNNNGTG | 1 cut(s) | 623 |
| AluBI | AGCT | 9 cut(s) | 274, 307, 329, 389, 578, 616, 751, 918, 1002 |
| AluI | AGCT | 9 cut(s) | 274, 307, 329, 389, 578, 616, 751, 918, 1002 |
| Alw21I | GWGCWC | 2 cut(s) | 753, 1049 |
| Alw26I | GTCTC | 4 cut(s) | 226, 362, 506, 593 |
| AlwI | GGATC | 2 cut(s) | 771, 844 |
| Ama87I | CYCGRG | 1 cut(s) | 876 |
| AoxI | GGCC | 7 cut(s) | 171, 342, 560, 582, 667, 810, 872 |
| ApeKI | GCWGC | 2 cut(s) | 49, 86 |
| AseI | ATTAAT | 1 cut(s) | 717 |
| Asp718I | GGTACC | 1 cut(s) | 1227 |
| AspLEI | GCGC | 1 cut(s) | 1246 |
| AspS9I | GGNCC | 2 cut(s) | 153, 810 |
| AsuHPI | GGTGA | 4 cut(s) | 242, 664, 1073, 1164 |
| AsuNHI | GCTAGC | 1 cut(s) | 307 |
| AvaI | CYCGRG | 1 cut(s) | 876 |
| AvaII | GGWCC | 1 cut(s) | 153 |
| AxyI | CCTNAGG | 1 cut(s) | 962 |
| BalI | TGGCCA | 1 cut(s) | 584 |
| BanI | GGYRCC | 2 cut(s) | 485, 1227 |
| BanII | GRGCYC | 1 cut(s) | 753 |
| Bbv12I | GWGCWC | 2 cut(s) | 753, 1049 |
| BbvI | GCAGC | 2 cut(s) | 61, 98 |
| BccI | CCATC | 1 cut(s) | 500 |
| BceAI | ACGGC | 1 cut(s) | 126 |
| BciT130I | CCWGG | 1 cut(s) | 418 |
| BclI | TGATCA | 3 cut(s) | 723, 1087, 1276 |
| BcoDI | GTCTC | 4 cut(s) | 226, 362, 506, 593 |
| BfaI | CTAG | 7 cut(s) | 192, 308, 572, 690, 767, 992, 1034 |
| BfmI | CTRYAG | 3 cut(s) | 47, 384, 1314 |
| BfoI | RGCGCY | 1 cut(s) | 1247 |
| BfrI | CTTAAG | 1 cut(s) | 814 |
| BfuAI | ACCTGC | 1 cut(s) | 1321 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 1241 |
| BglII | AGATCT | 1 cut(s) | 907 |
| BisI | GCNGC | 3 cut(s) | 50, 87, 605 |
| BlsI | GCNGC | 3 cut(s) | 51, 88, 606 |
| BmcAI | AGTACT | 1 cut(s) | 56 |
| Bme1390I | CCNGG | 1 cut(s) | 418 |
| Bme18I | GGWCC | 1 cut(s) | 153 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 465 |
| BmeT110I | CYCGRG | 1 cut(s) | 876 |
| BmgT120I | GGNCC | 2 cut(s) | 153, 810 |
| BmiI | GGNNCC | 5 cut(s) | 154, 487, 811, 1229, 1311 |
| BmrFI | CCNGG | 1 cut(s) | 418 |
| BmsI | GCATC | 3 cut(s) | 197, 353, 1020 |
| BmtI | GCTAGC | 1 cut(s) | 311 |
| BoxI | GACNNNNGTC | 1 cut(s) | 354 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 218, 250 |
| Bpu10I | CCTNAGC | 1 cut(s) | 869 |
| BpuEI | CTTGAG | 1 cut(s) | 1033 |
| BsaBI | GATNNNNATC | 2 cut(s) | 71, 1275 |
| BsaHI | GRCGYC | 1 cut(s) | 602 |
| BsaI | GGTCTC | 2 cut(s) | 362, 506 |
| BsaJI | CCNNGG | 2 cut(s) | 452, 501 |
| BsaWI | WCCGGW | 1 cut(s) | 353 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 148, 676, 1262 |
| Bse118I | RCCGGY | 2 cut(s) | 173, 1235 |
| Bse21I | CCTNAGG | 1 cut(s) | 962 |
| Bse3DI | GCAATG | 1 cut(s) | 1024 |
| Bse8I | GATNNNNATC | 2 cut(s) | 71, 1275 |
| BseBI | CCWGG | 1 cut(s) | 418 |
| BseDI | CCNNGG | 2 cut(s) | 452, 501 |
| BseGI | GGATG | 4 cut(s) | 267, 511, 787, 1207 |
| BseJI | GATNNNNATC | 2 cut(s) | 71, 1275 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 148, 676, 1262 |
| BseMI | GCAATG | 1 cut(s) | 1024 |
| BseMII | CTCAG | 2 cut(s) | 237, 1140 |
| BseX3I | CGGCCG | 1 cut(s) | 171 |
| BseXI | GCAGC | 2 cut(s) | 61, 98 |
| Bsh1285I | CGRYCG | 2 cut(s) | 174, 624 |
| BshFI | GGCC | 7 cut(s) | 173, 344, 562, 584, 669, 812, 874 |
| BshNI | GGYRCC | 2 cut(s) | 485, 1227 |
| BsiEI | CGRYCG | 2 cut(s) | 174, 624 |
| BsiHKAI | GWGCWC | 2 cut(s) | 753, 1049 |
| BsiHKCI | CYCGRG | 1 cut(s) | 876 |
| BsiSI | CCGG | 4 cut(s) | 170, 174, 354, 1236 |
| BslFI | GGGAC | 1 cut(s) | 992 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 148, 676, 1262 |
| BsmAI | GTCTC | 4 cut(s) | 226, 362, 506, 593 |
| BsmBI | CGTCTC | 1 cut(s) | 593 |
| BsmFI | GGGAC | 1 cut(s) | 992 |
| BsnI | GGCC | 7 cut(s) | 173, 344, 562, 584, 669, 812, 874 |
| Bso31I | GGTCTC | 2 cut(s) | 362, 506 |
| BsoBI | CYCGRG | 1 cut(s) | 876 |
| Bsp1286I | GDGCHC | 2 cut(s) | 753, 1049 |
| Bsp143I | GATC | 9 cut(s) | 66, 72, 723, 763, 849, 907, 1078, 1087, 1276 |
| Bsp19I | CCATGG | 1 cut(s) | 452 |
| BspACI | CCGC | 1 cut(s) | 605 |
| BspANI | GGCC | 7 cut(s) | 173, 344, 562, 584, 669, 812, 874 |
| BspCNI | CTCAG | 2 cut(s) | 236, 1141 |
| BspHI | TCATGA | 1 cut(s) | 1090 |
| BspLI | GGNNCC | 5 cut(s) | 154, 487, 811, 1229, 1311 |
| BspMAI | CTGCAG | 2 cut(s) | 51, 1318 |
| BspMI | ACCTGC | 1 cut(s) | 1321 |
| BspOI | GCTAGC | 1 cut(s) | 311 |
| BspPI | GGATC | 2 cut(s) | 771, 844 |
| BspT107I | GGYRCC | 2 cut(s) | 485, 1227 |
| BspTI | CTTAAG | 1 cut(s) | 814 |
| BspTNI | GGTCTC | 2 cut(s) | 362, 506 |
| BsrDI | GCAATG | 1 cut(s) | 1024 |
| BsrFI | RCCGGY | 2 cut(s) | 173, 1235 |
| BssAI | RCCGGY | 2 cut(s) | 173, 1235 |
| BssECI | CCNNGG | 2 cut(s) | 452, 501 |
| BssMI | GATC | 9 cut(s) | 66, 72, 723, 763, 849, 907, 1078, 1087, 1276 |
| BssNI | GRCGYC | 1 cut(s) | 602 |
| BssT1I | CCWWGG | 2 cut(s) | 452, 501 |
| Bst2UI | CCWGG | 1 cut(s) | 418 |
| Bst4CI | ACNGT | 3 cut(s) | 485, 622, 889 |
| Bst6I | CTCTTC | 2 cut(s) | 241, 948 |
| BstACI | GRCGYC | 1 cut(s) | 602 |
| BstAFI | CTTAAG | 1 cut(s) | 814 |
| BstC8I | GCNNGC | 5 cut(s) | 161, 175, 276, 309, 327 |
| BstDEI | CTNAG | 4 cut(s) | 223, 869, 962, 1149 |
| BstDSI | CCRYGG | 1 cut(s) | 452 |
| BstF5I | GGATG | 4 cut(s) | 267, 511, 787, 1207 |
| BstH2I | RGCGCY | 1 cut(s) | 1247 |
| BstHHI | GCGC | 1 cut(s) | 1246 |
| BstKTI | GATC | 9 cut(s) | 69, 75, 726, 766, 852, 910, 1081, 1090, 1279 |
| BstMAI | GTCTC | 4 cut(s) | 226, 362, 506, 593 |
| BstMBI | GATC | 9 cut(s) | 66, 72, 723, 763, 849, 907, 1078, 1087, 1276 |
| BstMCI | CGRYCG | 2 cut(s) | 174, 624 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 568, 613, 1053, 1241, 1322 |
| BstNI | CCWGG | 1 cut(s) | 418 |
| BstNSI | RCATGY | 2 cut(s) | 100, 991 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 354 |
| BstSCI | CCNGG | 1 cut(s) | 416 |
| BstSFI | CTRYAG | 3 cut(s) | 47, 384, 1314 |
| BstV1I | GCAGC | 2 cut(s) | 61, 98 |
| BstX2I | RGATCY | 2 cut(s) | 763, 907 |
| BstYI | RGATCY | 2 cut(s) | 763, 907 |
| BstZI | CGGCCG | 1 cut(s) | 171 |
| Bsu36I | CCTNAGG | 1 cut(s) | 962 |
| BsuRI | GGCC | 7 cut(s) | 173, 344, 562, 584, 669, 812, 874 |
| BtgI | CCRYGG | 1 cut(s) | 452 |
| BtsCI | GGATG | 4 cut(s) | 267, 511, 787, 1207 |
| BtsIMutI | CAGTG | 1 cut(s) | 733 |
| BveI | ACCTGC | 1 cut(s) | 1321 |
| Cac8I | GCNNGC | 5 cut(s) | 161, 175, 276, 309, 327 |
| CciI | TCATGA | 1 cut(s) | 1090 |
| CfoI | GCGC | 1 cut(s) | 1246 |
| Cfr10I | RCCGGY | 2 cut(s) | 173, 1235 |
| Cfr13I | GGNCC | 2 cut(s) | 153, 810 |
| CseI | GACGC | 1 cut(s) | 610 |
| Csp6I | GTAC | 2 cut(s) | 55, 1228 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 1087, 1122 |
| CviAII | CATG | 8 cut(s) | 97, 453, 470, 932, 988, 1085, 1091, 1299 |
| CviQI | GTAC | 2 cut(s) | 55, 1228 |
| DdeI | CTNAG | 4 cut(s) | 223, 869, 962, 1149 |
| DpnI | GATC | 9 cut(s) | 68, 74, 725, 765, 851, 909, 1080, 1089, 1278 |
| DpnII | GATC | 9 cut(s) | 66, 72, 723, 763, 849, 907, 1078, 1087, 1276 |
| DraI | TTTAAA | 1 cut(s) | 612 |
| DriI | GACNNNNNGTC | 1 cut(s) | 465 |
| EaeI | YGGCCR | 2 cut(s) | 171, 582 |
| EagI | CGGCCG | 1 cut(s) | 171 |
| Eam1104I | CTCTTC | 2 cut(s) | 241, 948 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 465 |
| EarI | CTCTTC | 2 cut(s) | 241, 948 |
| Ecl136II | GAGCTC | 1 cut(s) | 751 |
| EclXI | CGGCCG | 1 cut(s) | 171 |
| Eco130I | CCWWGG | 2 cut(s) | 452, 501 |
| Eco147I | AGGCCT | 1 cut(s) | 874 |
| Eco24I | GRGCYC | 1 cut(s) | 753 |
| Eco31I | GGTCTC | 2 cut(s) | 362, 506 |
| Eco47I | GGWCC | 1 cut(s) | 153 |
| Eco52I | CGGCCG | 1 cut(s) | 171 |
| Eco53kI | GAGCTC | 1 cut(s) | 751 |
| Eco57I | CTGAAG | 1 cut(s) | 1178 |
| Eco81I | CCTNAGG | 1 cut(s) | 962 |
| Eco88I | CYCGRG | 1 cut(s) | 876 |
| EcoICRI | GAGCTC | 1 cut(s) | 751 |
| EcoO109I | RGGNCCY | 1 cut(s) | 810 |
| EcoRII | CCWGG | 1 cut(s) | 416 |
| EcoT14I | CCWWGG | 2 cut(s) | 452, 501 |
| EcoT38I | GRGCYC | 1 cut(s) | 753 |
| ErhI | CCWWGG | 2 cut(s) | 452, 501 |
| Esp3I | CGTCTC | 1 cut(s) | 593 |
| FaeI | CATG | 8 cut(s) | 100, 456, 473, 935, 991, 1088, 1094, 1302 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 894, 926, 945, 977 |
| FaqI | GGGAC | 1 cut(s) | 992 |
| FatI | CATG | 8 cut(s) | 96, 452, 469, 931, 987, 1084, 1090, 1298 |
| FauNDI | CATATG | 1 cut(s) | 1331 |
| FbaI | TGATCA | 3 cut(s) | 723, 1087, 1276 |
| Fnu4HI | GCNGC | 3 cut(s) | 50, 87, 605 |
| FokI | GGATG | 4 cut(s) | 274, 518, 794, 1214 |
| FriOI | GRGCYC | 1 cut(s) | 753 |
| Fsp4HI | GCNGC | 3 cut(s) | 50, 87, 605 |
| FspBI | CTAG | 7 cut(s) | 192, 308, 572, 690, 767, 992, 1034 |
| GlaI | GCGC | 1 cut(s) | 1245 |
| GluI | GCNGC | 3 cut(s) | 50, 87, 605 |
| HaeII | RGCGCY | 1 cut(s) | 1247 |
| HaeIII | GGCC | 7 cut(s) | 173, 344, 562, 584, 669, 812, 874 |
| HapII | CCGG | 4 cut(s) | 170, 174, 354, 1236 |
| HgaI | GACGC | 1 cut(s) | 610 |
| HhaI | GCGC | 1 cut(s) | 1246 |
| Hin1I | GRCGYC | 1 cut(s) | 602 |
| Hin1II | CATG | 8 cut(s) | 100, 456, 473, 935, 991, 1088, 1094, 1302 |
| Hin6I | GCGC | 1 cut(s) | 1244 |
| HinP1I | GCGC | 1 cut(s) | 1244 |
| HindIII | AAGCTT | 2 cut(s) | 576, 1000 |
| HinfI | GANTC | 4 cut(s) | 233, 350, 410, 1287 |
| HpaII | CCGG | 4 cut(s) | 170, 174, 354, 1236 |
| HphI | GGTGA | 4 cut(s) | 242, 664, 1073, 1164 |
| Hpy166II | GTNNAC | 2 cut(s) | 799, 928 |
| Hpy188I | TCNGA | 4 cut(s) | 226, 362, 854, 1150 |
| Hpy188III | TCNNGA | 4 cut(s) | 70, 776, 1050, 1091 |
| Hpy8I | GTNNAC | 2 cut(s) | 799, 928 |
| Hpy99I | CGWCG | 2 cut(s) | 1193, 1196 |
| HpyAV | CCTTC | 5 cut(s) | 263, 652, 1119, 1153, 1350 |
| HpyCH4III | ACNGT | 3 cut(s) | 485, 622, 889 |
| HpyCH4IV | ACGT | 1 cut(s) | 1194 |
| HpyCH4V | TGCA | 8 cut(s) | 49, 100, 212, 325, 339, 552, 804, 1316 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 568, 613, 1053, 1241, 1322 |
| HpyF3I | CTNAG | 4 cut(s) | 223, 869, 962, 1149 |
| HpySE526I | ACGT | 1 cut(s) | 1194 |
| Hsp92I | GRCGYC | 1 cut(s) | 602 |
| Hsp92II | CATG | 8 cut(s) | 100, 456, 473, 935, 991, 1088, 1094, 1302 |
| HspAI | GCGC | 1 cut(s) | 1244 |
| KpnI | GGTACC | 1 cut(s) | 1231 |
| KroI | GCCGGC | 1 cut(s) | 173 |
| KroNI | GCCGGC | 1 cut(s) | 175 |
| Ksp22I | TGATCA | 3 cut(s) | 723, 1087, 1276 |
| Kzo9I | GATC | 9 cut(s) | 66, 72, 723, 763, 849, 907, 1078, 1087, 1276 |
| Lsp1109I | GCAGC | 2 cut(s) | 61, 98 |
| LweI | GCATC | 3 cut(s) | 197, 353, 1020 |
| MaeI | CTAG | 7 cut(s) | 192, 308, 572, 690, 767, 992, 1034 |
| MaeII | ACGT | 1 cut(s) | 1194 |
| MaeIII | GTNAC | 3 cut(s) | 125, 628, 883 |
| MalI | GATC | 9 cut(s) | 68, 74, 725, 765, 851, 909, 1080, 1089, 1278 |
| MboI | GATC | 9 cut(s) | 66, 72, 723, 763, 849, 907, 1078, 1087, 1276 |
| MboII | GAAGA | 7 cut(s) | 228, 831, 845, 908, 911, 965, 1280 |
| MflI | RGATCY | 2 cut(s) | 763, 907 |
| MhlI | GDGCHC | 2 cut(s) | 753, 1049 |
| MlsI | TGGCCA | 1 cut(s) | 584 |
| MluCI | AATT | 4 cut(s) | 528, 739, 822, 1345 |
| MluNI | TGGCCA | 1 cut(s) | 584 |
| MlyI | GAGTC | 3 cut(s) | 227, 344, 1296 |
| MmeI | TCCRAC | 1 cut(s) | 84 |
| Mox20I | TGGCCA | 1 cut(s) | 584 |
| MroNI | GCCGGC | 1 cut(s) | 173 |
| MscI | TGGCCA | 1 cut(s) | 584 |
| MseI | TTAA | 6 cut(s) | 425, 611, 695, 717, 815, 1295 |
| MslI | CAYNNNNRTG | 3 cut(s) | 95, 623, 1089 |
| Msp20I | TGGCCA | 1 cut(s) | 584 |
| MspCI | CTTAAG | 1 cut(s) | 814 |
| MspI | CCGG | 4 cut(s) | 170, 174, 354, 1236 |
| MspR9I | CCNGG | 1 cut(s) | 418 |
| MvaI | CCWGG | 1 cut(s) | 418 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 568, 613, 1053, 1241, 1322 |
| NaeI | GCCGGC | 1 cut(s) | 175 |
| NcoI | CCATGG | 1 cut(s) | 452 |
| NdeI | CATATG | 1 cut(s) | 1331 |
| NdeII | GATC | 9 cut(s) | 66, 72, 723, 763, 849, 907, 1078, 1087, 1276 |
| NgoMIV | GCCGGC | 1 cut(s) | 173 |
| NheI | GCTAGC | 1 cut(s) | 307 |
| NlaIII | CATG | 8 cut(s) | 100, 456, 473, 935, 991, 1088, 1094, 1302 |
| NlaIV | GGNNCC | 5 cut(s) | 154, 487, 811, 1229, 1311 |
| NmuCI | GTSAC | 2 cut(s) | 125, 883 |
| NspI | RCATGY | 2 cut(s) | 100, 991 |
| OliI | CACNNNNGTG | 1 cut(s) | 623 |
| PaeR7I | CTCGAG | 1 cut(s) | 876 |
| PagI | TCATGA | 1 cut(s) | 1090 |
| PceI | AGGCCT | 1 cut(s) | 874 |
| PdiI | GCCGGC | 1 cut(s) | 175 |
| PfeI | GAWTC | 1 cut(s) | 410 |
| PflFI | GACNNNGTC | 1 cut(s) | 938 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 676 |
| PkrI | GCNGC | 3 cut(s) | 51, 88, 606 |
| PleI | GAGTC | 3 cut(s) | 227, 344, 1295 |
| PpsI | GAGTC | 3 cut(s) | 227, 344, 1295 |
| PshAI | GACNNNNGTC | 1 cut(s) | 354 |
| PshBI | ATTAAT | 1 cut(s) | 717 |
| Psp124BI | GAGCTC | 1 cut(s) | 753 |
| Psp6I | CCWGG | 1 cut(s) | 416 |
| PspGI | CCWGG | 1 cut(s) | 416 |
| PspN4I | GGNNCC | 5 cut(s) | 154, 487, 811, 1229, 1311 |
| PspPI | GGNCC | 2 cut(s) | 153, 810 |
| PspXI | VCTCGAGB | 1 cut(s) | 876 |
| PstI | CTGCAG | 2 cut(s) | 51, 1318 |
| PsuI | RGATCY | 2 cut(s) | 763, 907 |
| PsyI | GACNNNGTC | 1 cut(s) | 938 |
| RsaI | GTAC | 2 cut(s) | 56, 1229 |
| RsaNI | GTAC | 2 cut(s) | 55, 1228 |
| RseI | CAYNNNNRTG | 3 cut(s) | 95, 623, 1089 |
| SacI | GAGCTC | 1 cut(s) | 753 |
| SaqAI | TTAA | 6 cut(s) | 425, 611, 695, 717, 815, 1295 |
| SatI | GCNGC | 3 cut(s) | 50, 87, 605 |
| Sau3AI | GATC | 9 cut(s) | 66, 72, 723, 763, 849, 907, 1078, 1087, 1276 |
| Sau96I | GGNCC | 2 cut(s) | 153, 810 |
| ScaI | AGTACT | 1 cut(s) | 56 |
| SchI | GAGTC | 3 cut(s) | 227, 344, 1296 |
| ScrFI | CCNGG | 1 cut(s) | 418 |
| SduI | GDGCHC | 2 cut(s) | 753, 1049 |
| SfaNI | GCATC | 3 cut(s) | 197, 353, 1020 |
| SfcI | CTRYAG | 3 cut(s) | 47, 384, 1314 |
| Sfr274I | CTCGAG | 1 cut(s) | 876 |
| SinI | GGWCC | 1 cut(s) | 153 |
| SlaI | CTCGAG | 1 cut(s) | 876 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 95, 623, 1089 |
| SmlI | CTYRAG | 3 cut(s) | 814, 876, 1048 |
| SmoI | CTYRAG | 3 cut(s) | 814, 876, 1048 |
| Sse9I | AATT | 4 cut(s) | 528, 739, 822, 1345 |
| SseBI | AGGCCT | 1 cut(s) | 874 |
| SsiI | CCGC | 1 cut(s) | 605 |
| SspMI | CTAG | 7 cut(s) | 192, 308, 572, 690, 767, 992, 1034 |
| SstI | GAGCTC | 1 cut(s) | 753 |
| StuI | AGGCCT | 1 cut(s) | 874 |
| StyD4I | CCNGG | 1 cut(s) | 416 |
| StyI | CCWWGG | 2 cut(s) | 452, 501 |
| TaaI | ACNGT | 3 cut(s) | 485, 622, 889 |
| TaiI | ACGT | 1 cut(s) | 1197 |
| TaqI | TCGA | 1 cut(s) | 877 |
| TasI | AATT | 4 cut(s) | 528, 739, 822, 1345 |
| TatI | WGTACW | 1 cut(s) | 54 |
| TauI | GCSGC | 1 cut(s) | 607 |
| TfiI | GAWTC | 1 cut(s) | 410 |
| Tru1I | TTAA | 6 cut(s) | 425, 611, 695, 717, 815, 1295 |
| Tru9I | TTAA | 6 cut(s) | 425, 611, 695, 717, 815, 1295 |
| TscAI | CASTG | 1 cut(s) | 733 |
| TseFI | GTSAC | 2 cut(s) | 125, 883 |
| TseI | GCWGC | 2 cut(s) | 49, 86 |
| Tsp45I | GTSAC | 2 cut(s) | 125, 883 |
| TspDTI | ATGAA | 3 cut(s) | 135, 671, 1035 |
| TspRI | CASTG | 1 cut(s) | 733 |
| Tth111I | GACNNNGTC | 1 cut(s) | 938 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 676 |
| Vha464I | CTTAAG | 1 cut(s) | 814 |
| VpaK11BI | GGWCC | 1 cut(s) | 153 |
| VspI | ATTAAT | 1 cut(s) | 717 |
| XceI | RCATGY | 2 cut(s) | 100, 991 |
| XhoI | CTCGAG | 1 cut(s) | 876 |
| XspI | CTAG | 7 cut(s) | 192, 308, 572, 690, 767, 992, 1034 |
| ZrmI | AGTACT | 1 cut(s) | 56 |