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| Species | Orthologous Gene IDs |
|---|---|
| malus_domestica | MD04G1046200.v1.1 |
| prunus_persica | Prupe.1G199700_v2.0.a1 |
| pyrus_communis | pycom04g04010 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 402 |
| Acc65I | GGTACC | 1 cut(s) | 569 |
| AccB1I | GGYRCC | 1 cut(s) | 569 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1531 |
| AccII | CGCG | 1 cut(s) | 503 |
| AciI | CCGC | 1 cut(s) | 1448 |
| AclWI | GGATC | 3 cut(s) | 191, 204, 1055 |
| AcsI | RAATTY | 3 cut(s) | 321, 949, 1333 |
| AcuI | CTGAAG | 1 cut(s) | 407 |
| AcyI | GRCGYC | 1 cut(s) | 721 |
| AfaI | GTAC | 4 cut(s) | 26, 571, 1154, 1191 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 1348, 1531 |
| AgsI | TTSAA | 9 cut(s) | 214, 264, 624, 645, 781, 823, 924, 947, 1423 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1514, 1546 |
| Alw21I | GWGCWC | 1 cut(s) | 986 |
| Alw26I | GTCTC | 3 cut(s) | 163, 743, 1194 |
| AlwI | GGATC | 3 cut(s) | 191, 204, 1055 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 812 |
| Ama87I | CYCGRG | 1 cut(s) | 1342 |
| ApeKI | GCWGC | 4 cut(s) | 6, 686, 1254, 1562 |
| ApoI | RAATTY | 3 cut(s) | 321, 949, 1333 |
| Asp718I | GGTACC | 1 cut(s) | 569 |
| AsuC2I | CCSGG | 2 cut(s) | 1343, 1344 |
| AsuHPI | GGTGA | 4 cut(s) | 58, 544, 646, 1081 |
| AvaI | CYCGRG | 1 cut(s) | 1342 |
| BamHI | GGATCC | 1 cut(s) | 196 |
| BanI | GGYRCC | 1 cut(s) | 569 |
| BanII | GRGCYC | 2 cut(s) | 165, 986 |
| Bbv12I | GWGCWC | 1 cut(s) | 986 |
| BbvI | GCAGC | 4 cut(s) | 18, 673, 1241, 1574 |
| BccI | CCATC | 4 cut(s) | 37, 100, 1432, 1533 |
| BceAI | ACGGC | 1 cut(s) | 848 |
| BcnI | CCSGG | 2 cut(s) | 1343, 1344 |
| BcoDI | GTCTC | 3 cut(s) | 163, 743, 1194 |
| BfaI | CTAG | 4 cut(s) | 32, 836, 1358, 1620 |
| BfmI | CTRYAG | 5 cut(s) | 552, 687, 1051, 1560, 1593 |
| BisI | GCNGC | 5 cut(s) | 7, 687, 1255, 1449, 1563 |
| BlsI | GCNGC | 5 cut(s) | 8, 688, 1256, 1450, 1564 |
| Bme1390I | CCNGG | 2 cut(s) | 1343, 1344 |
| BmeT110I | CYCGRG | 1 cut(s) | 1342 |
| BmiI | GGNNCC | 2 cut(s) | 198, 571 |
| BmrFI | CCNGG | 2 cut(s) | 1343, 1344 |
| BmsI | GCATC | 4 cut(s) | 164, 572, 1228, 1372 |
| BoxI | GACNNNNGTC | 1 cut(s) | 735 |
| BpmI | CTGGAG | 3 cut(s) | 277, 702, 1598 |
| BpuEI | CTTGAG | 4 cut(s) | 79, 725, 1000, 1237 |
| BpuMI | CCSGG | 2 cut(s) | 1343, 1344 |
| BsaHI | GRCGYC | 1 cut(s) | 721 |
| BsaI | GGTCTC | 1 cut(s) | 743 |
| BsaJI | CCNNGG | 1 cut(s) | 1342 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 1348, 1531 |
| Bse1I | ACTGG | 4 cut(s) | 260, 631, 685, 1299 |
| Bse3DI | GCAATG | 3 cut(s) | 600, 1252, 1458 |
| BseDI | CCNNGG | 1 cut(s) | 1342 |
| BseGI | GGATG | 4 cut(s) | 92, 662, 1203, 1387 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 1348, 1531 |
| BseMI | GCAATG | 3 cut(s) | 600, 1252, 1458 |
| BseMII | CTCAG | 3 cut(s) | 34, 627, 1152 |
| BseNI | ACTGG | 4 cut(s) | 260, 631, 685, 1299 |
| BseRI | GAGGAG | 1 cut(s) | 240 |
| BseXI | GCAGC | 4 cut(s) | 18, 673, 1241, 1574 |
| BsgI | GTGCAG | 1 cut(s) | 1062 |
| Bsh1236I | CGCG | 1 cut(s) | 503 |
| BshNI | GGYRCC | 1 cut(s) | 569 |
| BsiHKAI | GWGCWC | 1 cut(s) | 986 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1342 |
| BsiSI | CCGG | 2 cut(s) | 1178, 1343 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 1348, 1531 |
| BsmAI | GTCTC | 3 cut(s) | 163, 743, 1194 |
| BsmI | GAATGC | 2 cut(s) | 476, 1078 |
| Bso31I | GGTCTC | 1 cut(s) | 743 |
| BsoBI | CYCGRG | 1 cut(s) | 1342 |
| Bsp1286I | GDGCHC | 2 cut(s) | 165, 986 |
| Bsp143I | GATC | 2 cut(s) | 196, 1047 |
| BspACI | CCGC | 1 cut(s) | 1448 |
| BspCNI | CTCAG | 3 cut(s) | 33, 628, 1151 |
| BspFNI | CGCG | 1 cut(s) | 503 |
| BspHI | TCATGA | 1 cut(s) | 1513 |
| BspLI | GGNNCC | 2 cut(s) | 198, 571 |
| BspMAI | CTGCAG | 3 cut(s) | 556, 691, 1564 |
| BspPI | GGATC | 3 cut(s) | 191, 204, 1055 |
| BspT107I | GGYRCC | 1 cut(s) | 569 |
| BspTNI | GGTCTC | 1 cut(s) | 743 |
| BsrDI | GCAATG | 3 cut(s) | 600, 1252, 1458 |
| BsrI | ACTGG | 4 cut(s) | 260, 631, 685, 1299 |
| BssECI | CCNNGG | 1 cut(s) | 1342 |
| BssMI | GATC | 2 cut(s) | 196, 1047 |
| BssNI | GRCGYC | 1 cut(s) | 721 |
| Bst4CI | ACNGT | 7 cut(s) | 174, 187, 268, 766, 874, 1175, 1375 |
| Bst6I | CTCTTC | 1 cut(s) | 368 |
| BstACI | GRCGYC | 1 cut(s) | 721 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 152, 797 |
| BstC8I | GCNNGC | 4 cut(s) | 248, 519, 705, 1243 |
| BstDEI | CTNAG | 7 cut(s) | 20, 616, 636, 708, 910, 1138, 1226 |
| BstF5I | GGATG | 4 cut(s) | 92, 662, 1203, 1387 |
| BstFNI | CGCG | 1 cut(s) | 503 |
| BstKTI | GATC | 2 cut(s) | 199, 1050 |
| BstMAI | GTCTC | 3 cut(s) | 163, 743, 1194 |
| BstMBI | GATC | 2 cut(s) | 196, 1047 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 152, 473, 560, 797, 1251 |
| BstNSI | RCATGY | 2 cut(s) | 847, 936 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 735 |
| BstSCI | CCNGG | 2 cut(s) | 1341, 1342 |
| BstSFI | CTRYAG | 5 cut(s) | 552, 687, 1051, 1560, 1593 |
| BstUI | CGCG | 1 cut(s) | 503 |
| BstV1I | GCAGC | 4 cut(s) | 18, 673, 1241, 1574 |
| BstX2I | RGATCY | 2 cut(s) | 196, 1047 |
| BstYI | RGATCY | 2 cut(s) | 196, 1047 |
| BtsCI | GGATG | 4 cut(s) | 92, 662, 1203, 1387 |
| BtsI | GCAGTG | 5 cut(s) | 419, 434, 549, 798, 1408 |
| BtsIMutI | CAGTG | 9 cut(s) | 183, 419, 434, 549, 771, 798, 813, 1380, 1408 |
| Cac8I | GCNNGC | 4 cut(s) | 248, 519, 705, 1243 |
| CaiI | CAGNNNCTG | 1 cut(s) | 812 |
| CciI | TCATGA | 1 cut(s) | 1513 |
| Cfr9I | CCCGGG | 1 cut(s) | 1342 |
| CseI | GACGC | 1 cut(s) | 710 |
| Csp6I | GTAC | 4 cut(s) | 25, 570, 1153, 1190 |
| CspCI | CAANNNNNGTGG | 4 cut(s) | 85, 120, 510, 545 |
| CviAII | CATG | 6 cut(s) | 40, 166, 284, 844, 933, 1514 |
| CviQI | GTAC | 4 cut(s) | 25, 570, 1153, 1190 |
| DdeI | CTNAG | 7 cut(s) | 20, 616, 636, 708, 910, 1138, 1226 |
| DpnI | GATC | 2 cut(s) | 198, 1049 |
| DpnII | GATC | 2 cut(s) | 196, 1047 |
| DraI | TTTAAA | 1 cut(s) | 364 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 402 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 402 |
| Eam1104I | CTCTTC | 1 cut(s) | 368 |
| EarI | CTCTTC | 1 cut(s) | 368 |
| Ecl136II | GAGCTC | 1 cut(s) | 984 |
| Eco24I | GRGCYC | 2 cut(s) | 165, 986 |
| Eco31I | GGTCTC | 1 cut(s) | 743 |
| Eco53kI | GAGCTC | 1 cut(s) | 984 |
| Eco57I | CTGAAG | 1 cut(s) | 407 |
| Eco88I | CYCGRG | 1 cut(s) | 1342 |
| EcoICRI | GAGCTC | 1 cut(s) | 984 |
| EcoT22I | ATGCAT | 1 cut(s) | 157 |
| EcoT38I | GRGCYC | 2 cut(s) | 165, 986 |
| FaeI | CATG | 6 cut(s) | 43, 169, 287, 847, 936, 1517 |
| FatI | CATG | 6 cut(s) | 39, 165, 283, 843, 932, 1513 |
| Fnu4HI | GCNGC | 5 cut(s) | 7, 687, 1255, 1449, 1563 |
| FokI | GGATG | 4 cut(s) | 79, 649, 1190, 1394 |
| FriOI | GRGCYC | 2 cut(s) | 165, 986 |
| Fsp4HI | GCNGC | 5 cut(s) | 7, 687, 1255, 1449, 1563 |
| FspBI | CTAG | 4 cut(s) | 32, 836, 1358, 1620 |
| GluI | GCNGC | 5 cut(s) | 7, 687, 1255, 1449, 1563 |
| GsuI | CTGGAG | 3 cut(s) | 277, 702, 1598 |
| HapII | CCGG | 2 cut(s) | 1178, 1343 |
| HgaI | GACGC | 1 cut(s) | 710 |
| Hin1I | GRCGYC | 1 cut(s) | 721 |
| Hin1II | CATG | 6 cut(s) | 43, 169, 287, 847, 936, 1517 |
| HindIII | AAGCTT | 1 cut(s) | 646 |
| HinfI | GANTC | 4 cut(s) | 139, 620, 961, 1194 |
| HpaII | CCGG | 2 cut(s) | 1178, 1343 |
| HphI | GGTGA | 4 cut(s) | 58, 544, 646, 1081 |
| Hpy166II | GTNNAC | 5 cut(s) | 27, 535, 841, 1497, 1549 |
| Hpy188III | TCNNGA | 5 cut(s) | 742, 813, 944, 1216, 1514 |
| Hpy8I | GTNNAC | 5 cut(s) | 27, 535, 841, 1497, 1549 |
| HpyAV | CCTTC | 2 cut(s) | 1144, 1372 |
| HpyCH4III | ACNGT | 7 cut(s) | 174, 187, 268, 766, 874, 1175, 1375 |
| HpyCH4IV | ACGT | 1 cut(s) | 1431 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 152, 473, 560, 797, 1251 |
| HpyF3I | CTNAG | 7 cut(s) | 20, 616, 636, 708, 910, 1138, 1226 |
| HpySE526I | ACGT | 1 cut(s) | 1431 |
| Hsp92I | GRCGYC | 1 cut(s) | 721 |
| Hsp92II | CATG | 6 cut(s) | 43, 169, 287, 847, 936, 1517 |
| KpnI | GGTACC | 1 cut(s) | 573 |
| Kzo9I | GATC | 2 cut(s) | 196, 1047 |
| LmnI | GCTCC | 3 cut(s) | 590, 683, 1300 |
| Lsp1109I | GCAGC | 4 cut(s) | 18, 673, 1241, 1574 |
| LweI | GCATC | 4 cut(s) | 164, 572, 1228, 1372 |
| MaeI | CTAG | 4 cut(s) | 32, 836, 1358, 1620 |
| MaeII | ACGT | 1 cut(s) | 1431 |
| MaeIII | GTNAC | 3 cut(s) | 416, 757, 926 |
| MalI | GATC | 2 cut(s) | 198, 1049 |
| MboI | GATC | 2 cut(s) | 196, 1047 |
| MboII | GAAGA | 5 cut(s) | 385, 400, 445, 724, 898 |
| MflI | RGATCY | 2 cut(s) | 196, 1047 |
| MhlI | GDGCHC | 2 cut(s) | 165, 986 |
| MmeI | TCCRAC | 1 cut(s) | 979 |
| Mph1103I | ATGCAT | 1 cut(s) | 157 |
| MseI | TTAA | 7 cut(s) | 234, 363, 869, 1062, 1434, 1572, 1602 |
| MslI | CAYNNNNRTG | 2 cut(s) | 44, 288 |
| MspI | CCGG | 2 cut(s) | 1178, 1343 |
| MspR9I | CCNGG | 2 cut(s) | 1343, 1344 |
| Mva1269I | GAATGC | 2 cut(s) | 476, 1078 |
| MvnI | CGCG | 1 cut(s) | 503 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 152, 473, 560, 797, 1251 |
| NciI | CCSGG | 2 cut(s) | 1343, 1344 |
| NdeII | GATC | 2 cut(s) | 196, 1047 |
| NlaIII | CATG | 6 cut(s) | 43, 169, 287, 847, 936, 1517 |
| NlaIV | GGNNCC | 2 cut(s) | 198, 571 |
| NmuCI | GTSAC | 1 cut(s) | 926 |
| NsiI | ATGCAT | 1 cut(s) | 157 |
| NspI | RCATGY | 2 cut(s) | 847, 936 |
| PagI | TCATGA | 1 cut(s) | 1513 |
| PctI | GAATGC | 2 cut(s) | 476, 1078 |
| PfeI | GAWTC | 4 cut(s) | 139, 620, 961, 1194 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1531 |
| PkrI | GCNGC | 5 cut(s) | 8, 688, 1256, 1450, 1564 |
| PshAI | GACNNNNGTC | 1 cut(s) | 735 |
| Psp124BI | GAGCTC | 1 cut(s) | 986 |
| PspN4I | GGNNCC | 2 cut(s) | 198, 571 |
| PstI | CTGCAG | 3 cut(s) | 556, 691, 1564 |
| PstNI | CAGNNNCTG | 1 cut(s) | 812 |
| PsuI | RGATCY | 2 cut(s) | 196, 1047 |
| RsaI | GTAC | 4 cut(s) | 26, 571, 1154, 1191 |
| RsaNI | GTAC | 4 cut(s) | 25, 570, 1153, 1190 |
| RseI | CAYNNNNRTG | 2 cut(s) | 44, 288 |
| SacI | GAGCTC | 1 cut(s) | 986 |
| SaqAI | TTAA | 7 cut(s) | 234, 363, 869, 1062, 1434, 1572, 1602 |
| SatI | GCNGC | 5 cut(s) | 7, 687, 1255, 1449, 1563 |
| Sau3AI | GATC | 2 cut(s) | 196, 1047 |
| ScrFI | CCNGG | 2 cut(s) | 1343, 1344 |
| SduI | GDGCHC | 2 cut(s) | 165, 986 |
| SfaNI | GCATC | 4 cut(s) | 164, 572, 1228, 1372 |
| SfcI | CTRYAG | 5 cut(s) | 552, 687, 1051, 1560, 1593 |
| SmaI | CCCGGG | 1 cut(s) | 1344 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 44, 288 |
| SmlI | CTYRAG | 4 cut(s) | 58, 740, 979, 1216 |
| SmoI | CTYRAG | 4 cut(s) | 58, 740, 979, 1216 |
| SsiI | CCGC | 1 cut(s) | 1448 |
| SspMI | CTAG | 4 cut(s) | 32, 836, 1358, 1620 |
| SstI | GAGCTC | 1 cut(s) | 986 |
| StyD4I | CCNGG | 2 cut(s) | 1341, 1342 |
| TaaI | ACNGT | 7 cut(s) | 174, 187, 268, 766, 874, 1175, 1375 |
| TaiI | ACGT | 1 cut(s) | 1434 |
| TatI | WGTACW | 1 cut(s) | 1152 |
| TauI | GCSGC | 1 cut(s) | 1451 |
| TfiI | GAWTC | 4 cut(s) | 139, 620, 961, 1194 |
| Tru1I | TTAA | 7 cut(s) | 234, 363, 869, 1062, 1434, 1572, 1602 |
| Tru9I | TTAA | 7 cut(s) | 234, 363, 869, 1062, 1434, 1572, 1602 |
| TscAI | CASTG | 9 cut(s) | 190, 419, 434, 556, 771, 798, 813, 1380, 1415 |
| TseFI | GTSAC | 1 cut(s) | 926 |
| TseI | GCWGC | 4 cut(s) | 6, 686, 1254, 1562 |
| Tsp45I | GTSAC | 1 cut(s) | 926 |
| TspDTI | ATGAA | 7 cut(s) | 272, 500, 573, 611, 1017, 1261, 1326 |
| TspMI | CCCGGG | 1 cut(s) | 1342 |
| TspRI | CASTG | 9 cut(s) | 190, 419, 434, 556, 771, 798, 813, 1380, 1415 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1531 |
| XapI | RAATTY | 3 cut(s) | 321, 949, 1333 |
| XceI | RCATGY | 2 cut(s) | 847, 936 |
| XmaI | CCCGGG | 1 cut(s) | 1342 |
| XspI | CTAG | 4 cut(s) | 32, 836, 1358, 1620 |
| Zsp2I | ATGCAT | 1 cut(s) | 157 |