Prupe.1G305400_v2.0.a1

DVL family

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
Physical Location & Seq
Reverse (-)
29893351 .. 29894137
787 bp
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UTR
Exon/CDS
Intron
Prupe.1G305400.1

Sequence Viewer

Length: 147 bp
ATGAAGATTGTGAGCAATTCCACCATGGCAGGCAGCAAGAGAAGGCTTTCTTCAAGCAAAGGACTTGGAGGGGTCCTCAGAGAGCAAAGAGCCAGGCTTTACATCATAAGGAGGTGTGTGGTCATGCTCCTTTGCTGGCATGATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

49

Amino Acids

5.48

Weight (kDa)

11.31

Isoelectric Point (pI)

64.63

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0019558)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G13245 AT1G68825 AT1G68825 AT3G25717
malus_domestica MD13G1046500.v1.1 MD16G1048200.v1.1
prunus_persica Prupe.1G305400_v2.0.a1

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AgsI TTSAA 1 cut(s) 54
AjnI CCWGG 1 cut(s) 92
ApeKI GCWGC 1 cut(s) 33
Asp700I GAANNNNTTC 1 cut(s) 46
AspS9I GGNCC 1 cut(s) 73
AvaII GGWCC 1 cut(s) 73
BbvI GCAGC 1 cut(s) 45
BciT130I CCWGG 1 cut(s) 94
BisI GCNGC 1 cut(s) 34
BlsI GCNGC 1 cut(s) 35
Bme1390I CCNGG 1 cut(s) 94
Bme18I GGWCC 1 cut(s) 73
BmgT120I GGNCC 1 cut(s) 73
BmiI GGNNCC 1 cut(s) 74
BmrFI CCNGG 1 cut(s) 94
BplI GAGNNNNNCTC 2 cut(s) 60, 92
BsaJI CCNNGG 1 cut(s) 24
BseBI CCWGG 1 cut(s) 94
BseDI CCNNGG 1 cut(s) 24
BseMII CTCAG 1 cut(s) 91
BseXI GCAGC 1 cut(s) 45
Bsp19I CCATGG 1 cut(s) 24
BspCNI CTCAG 1 cut(s) 90
BspLI GGNNCC 1 cut(s) 74
BssECI CCNNGG 1 cut(s) 24
BssT1I CCWWGG 1 cut(s) 24
Bst2UI CCWGG 1 cut(s) 94
BstC8I GCNNGC 2 cut(s) 31, 137
BstDEI CTNAG 1 cut(s) 77
BstDSI CCRYGG 1 cut(s) 24
BstNI CCWGG 1 cut(s) 94
BstSCI CCNGG 1 cut(s) 92
BstV1I GCAGC 1 cut(s) 45
BtgI CCRYGG 1 cut(s) 24
Cac8I GCNNGC 2 cut(s) 31, 137
Cfr13I GGNCC 1 cut(s) 73
CviAII CATG 3 cut(s) 25, 124, 140
CviJI RGCY 3 cut(s) 46, 92, 97
CviKI_1 RGCY 3 cut(s) 46, 92, 97
DdeI CTNAG 1 cut(s) 77
Eco130I CCWWGG 1 cut(s) 24
Eco47I GGWCC 1 cut(s) 73
EcoO109I RGGNCCY 1 cut(s) 73
EcoRII CCWGG 1 cut(s) 92
EcoT14I CCWWGG 1 cut(s) 24
ErhI CCWWGG 1 cut(s) 24
FaeI CATG 3 cut(s) 28, 127, 143
FaiI YATR 4 cut(s) 26, 107, 125, 141
FalI AAGNNNNNCTT 2 cut(s) 34, 66
FatI CATG 3 cut(s) 24, 123, 139
Fnu4HI GCNGC 1 cut(s) 34
Fsp4HI GCNGC 1 cut(s) 34
GluI GCNGC 1 cut(s) 34
Hin1II CATG 3 cut(s) 28, 127, 143
Hpy188I TCNGA 1 cut(s) 80
HpyAV CCTTC 1 cut(s) 36
HpyF3I CTNAG 1 cut(s) 77
Hsp92II CATG 3 cut(s) 28, 127, 143
LmnI GCTCC 1 cut(s) 132
LpnPI CCDG 4 cut(s) 15, 79, 106, 121
Lsp1109I GCAGC 1 cut(s) 45
MboII GAAGA 2 cut(s) 16, 42
MluCI AATT 1 cut(s) 16
MnlI CCTC 3 cut(s) 62, 86, 105
MroXI GAANNNNTTC 1 cut(s) 46
MseI TTAA 1 cut(s) 145
MspR9I CCNGG 1 cut(s) 94
MvaI CCWGG 1 cut(s) 94
NcoI CCATGG 1 cut(s) 24
NlaIII CATG 3 cut(s) 28, 127, 143
NlaIV GGNNCC 1 cut(s) 74
PdmI GAANNNNTTC 1 cut(s) 46
PkrI GCNGC 1 cut(s) 35
PpuMI RGGWCCY 1 cut(s) 73
Psp5II RGGWCCY 1 cut(s) 73
Psp6I CCWGG 1 cut(s) 92
PspGI CCWGG 1 cut(s) 92
PspN4I GGNNCC 1 cut(s) 74
PspPI GGNCC 1 cut(s) 73
PspPPI RGGWCCY 1 cut(s) 73
SaqAI TTAA 1 cut(s) 145
SatI GCNGC 1 cut(s) 34
Sau96I GGNCC 1 cut(s) 73
ScrFI CCNGG 1 cut(s) 94
SetI ASST 1 cut(s) 116
SgeI CNNG 8 cut(s) 37, 42, 49, 66, 77, 105, 106, 136
SinI GGWCC 1 cut(s) 73
Sse9I AATT 1 cut(s) 16
StyD4I CCNGG 1 cut(s) 92
StyI CCWWGG 1 cut(s) 24
TasI AATT 1 cut(s) 16
Tru1I TTAA 1 cut(s) 145
Tru9I TTAA 1 cut(s) 145
TseI GCWGC 1 cut(s) 33
TspDTI ATGAA 1 cut(s) 17
VpaK11BI GGWCC 1 cut(s) 73
XmnI GAANNNNTTC 1 cut(s) 46
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.