Prupe.1G364100_v2.0.a1

No description available

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
Physical Location & Seq
Forward (+)
33469681 .. 33469788
108 bp
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UTR
Exon/CDS
Intron
Prupe.1G364100.1

Sequence Viewer

Length: 108 bp
ATGGCCGAGTGGTCTAAGGCGCCAGACTCAAGTTCTGGTCTTCGAGAGAGGGCGTGGGTTCAAATCCCACTTCTGACATATTTTTTGACAATTTTTATATTTGATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

36

Amino Acids

4.09

Weight (kDa)

4.94

Isoelectric Point (pI)

34.58

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0022505)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 19
AcoI YGGCCR 1 cut(s) 3
AcyI GRCGYC 1 cut(s) 20
AgsI TTSAA 1 cut(s) 62
AoxI GGCC 1 cut(s) 3
ArsI GACNNNNNNTTYG 2 cut(s) 67, 99
AspLEI GCGC 1 cut(s) 22
BanI GGYRCC 1 cut(s) 19
BbsI GAAGAC 1 cut(s) 32
BfoI RGCGCY 1 cut(s) 23
BmiI GGNNCC 1 cut(s) 21
BpiI GAAGAC 1 cut(s) 32
BpuEI CTTGAG 1 cut(s) 13
BsaHI GRCGYC 1 cut(s) 20
BshFI GGCC 1 cut(s) 5
BshNI GGYRCC 1 cut(s) 19
BsnI GGCC 1 cut(s) 5
BspANI GGCC 1 cut(s) 5
BspLI GGNNCC 1 cut(s) 21
BspT107I GGYRCC 1 cut(s) 19
BssNI GRCGYC 1 cut(s) 20
BstACI GRCGYC 1 cut(s) 20
BstDEI CTNAG 1 cut(s) 15
BstH2I RGCGCY 1 cut(s) 23
BstHHI GCGC 1 cut(s) 22
BstV2I GAAGAC 1 cut(s) 32
BsuRI GGCC 1 cut(s) 5
CfoI GCGC 1 cut(s) 22
CviJI RGCY 1 cut(s) 5
CviKI_1 RGCY 1 cut(s) 5
DdeI CTNAG 1 cut(s) 15
DinI GGCGCC 1 cut(s) 21
EaeI YGGCCR 1 cut(s) 3
EgeI GGCGCC 1 cut(s) 21
EheI GGCGCC 1 cut(s) 21
FaiI YATR 2 cut(s) 79, 98
GlaI GCGC 1 cut(s) 21
HaeII RGCGCY 1 cut(s) 23
HaeIII GGCC 1 cut(s) 5
HhaI GCGC 1 cut(s) 22
Hin1I GRCGYC 1 cut(s) 20
Hin6I GCGC 1 cut(s) 20
HinP1I GCGC 1 cut(s) 20
HinfI GANTC 1 cut(s) 26
Hpy188I TCNGA 1 cut(s) 75
Hpy188III TCNNGA 1 cut(s) 44
HpyF3I CTNAG 1 cut(s) 15
Hsp92I GRCGYC 1 cut(s) 20
HspAI GCGC 1 cut(s) 20
KasI GGCGCC 1 cut(s) 19
LpnPI CCDG 2 cut(s) 21, 36
MboII GAAGA 1 cut(s) 32
MluCI AATT 1 cut(s) 90
Mly113I GGCGCC 1 cut(s) 20
MlyI GAGTC 1 cut(s) 20
MnlI CCTC 1 cut(s) 42
MseI TTAA 1 cut(s) 106
NarI GGCGCC 1 cut(s) 20
NlaIV GGNNCC 1 cut(s) 21
NmeAIII GCCGAG 1 cut(s) 31
PleI GAGTC 1 cut(s) 20
PluTI GGCGCC 1 cut(s) 23
PpsI GAGTC 1 cut(s) 20
PspN4I GGNNCC 1 cut(s) 21
SaqAI TTAA 1 cut(s) 106
SchI GAGTC 1 cut(s) 20
SfoI GGCGCC 1 cut(s) 21
SgeI CNNG 6 cut(s) 19, 35, 42, 48, 56, 66
SmlI CTYRAG 1 cut(s) 28
SmoI CTYRAG 1 cut(s) 28
Sse9I AATT 1 cut(s) 90
SspDI GGCGCC 1 cut(s) 19
TaqI TCGA 1 cut(s) 43
TasI AATT 1 cut(s) 90
Tru1I TTAA 1 cut(s) 106
Tru9I TTAA 1 cut(s) 106
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.