Prupe.1G508300_v2.0.a1

No description available

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
Physical Location & Seq
Reverse (-)
41927113 .. 41927229
117 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G508300.1

Sequence Viewer

Length: 117 bp
ATGGCCGAGTGGTCTAAGGCGCCAGACTCAAGTTCTGGTCCTCTAACGAGGGCGTGGGTTCAAATCCCACTTCTGACAATTCATGTATTCTATTTTTTTTATTTCTTGTACTCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

39

Amino Acids

4.47

Weight (kDa)

6.5

Isoelectric Point (pI)

44.73

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0022505)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 19
AcoI YGGCCR 1 cut(s) 3
AcyI GRCGYC 1 cut(s) 20
AfaI GTAC 1 cut(s) 110
AgsI TTSAA 1 cut(s) 62
AoxI GGCC 1 cut(s) 3
AspLEI GCGC 1 cut(s) 22
AspS9I GGNCC 1 cut(s) 38
AvaII GGWCC 1 cut(s) 38
BanI GGYRCC 1 cut(s) 19
BfoI RGCGCY 1 cut(s) 23
Bme18I GGWCC 1 cut(s) 38
BmgT120I GGNCC 1 cut(s) 38
BmiI GGNNCC 1 cut(s) 21
BpuEI CTTGAG 1 cut(s) 13
BsaHI GRCGYC 1 cut(s) 20
BshFI GGCC 1 cut(s) 5
BshNI GGYRCC 1 cut(s) 19
BsnI GGCC 1 cut(s) 5
BspANI GGCC 1 cut(s) 5
BspLI GGNNCC 1 cut(s) 21
BspT107I GGYRCC 1 cut(s) 19
BssNI GRCGYC 1 cut(s) 20
BstACI GRCGYC 1 cut(s) 20
BstDEI CTNAG 1 cut(s) 15
BstH2I RGCGCY 1 cut(s) 23
BstHHI GCGC 1 cut(s) 22
BsuRI GGCC 1 cut(s) 5
CfoI GCGC 1 cut(s) 22
Cfr13I GGNCC 1 cut(s) 38
Csp6I GTAC 1 cut(s) 109
CviAII CATG 1 cut(s) 83
CviJI RGCY 1 cut(s) 5
CviKI_1 RGCY 1 cut(s) 5
CviQI GTAC 1 cut(s) 109
DdeI CTNAG 1 cut(s) 15
DinI GGCGCC 1 cut(s) 21
EaeI YGGCCR 1 cut(s) 3
Eco47I GGWCC 1 cut(s) 38
EgeI GGCGCC 1 cut(s) 21
EheI GGCGCC 1 cut(s) 21
FaeI CATG 1 cut(s) 86
FaiI YATR 1 cut(s) 84
FatI CATG 1 cut(s) 82
GlaI GCGC 1 cut(s) 21
HaeII RGCGCY 1 cut(s) 23
HaeIII GGCC 1 cut(s) 5
HhaI GCGC 1 cut(s) 22
Hin1I GRCGYC 1 cut(s) 20
Hin1II CATG 1 cut(s) 86
Hin6I GCGC 1 cut(s) 20
HinP1I GCGC 1 cut(s) 20
HinfI GANTC 1 cut(s) 26
Hpy188I TCNGA 1 cut(s) 75
Hpy188III TCNNGA 1 cut(s) 114
HpyF3I CTNAG 1 cut(s) 15
Hsp92I GRCGYC 1 cut(s) 20
Hsp92II CATG 1 cut(s) 86
HspAI GCGC 1 cut(s) 20
KasI GGCGCC 1 cut(s) 19
LpnPI CCDG 2 cut(s) 21, 36
MluCI AATT 1 cut(s) 78
Mly113I GGCGCC 1 cut(s) 20
MlyI GAGTC 1 cut(s) 20
MnlI CCTC 2 cut(s) 42, 51
NarI GGCGCC 1 cut(s) 20
NlaIII CATG 1 cut(s) 86
NlaIV GGNNCC 1 cut(s) 21
NmeAIII GCCGAG 1 cut(s) 31
PleI GAGTC 1 cut(s) 20
PluTI GGCGCC 1 cut(s) 23
PpsI GAGTC 1 cut(s) 20
PspN4I GGNNCC 1 cut(s) 21
PspPI GGNCC 1 cut(s) 38
RsaI GTAC 1 cut(s) 110
RsaNI GTAC 1 cut(s) 109
Sau96I GGNCC 1 cut(s) 38
SchI GAGTC 1 cut(s) 20
SfoI GGCGCC 1 cut(s) 21
SgeI CNNG 7 cut(s) 19, 35, 42, 48, 60, 66, 95
SinI GGWCC 1 cut(s) 38
SmlI CTYRAG 1 cut(s) 28
SmoI CTYRAG 1 cut(s) 28
Sse9I AATT 1 cut(s) 78
SspDI GGCGCC 1 cut(s) 19
TasI AATT 1 cut(s) 78
TatI WGTACW 1 cut(s) 108
TspDTI ATGAA 1 cut(s) 71
VpaK11BI GGWCC 1 cut(s) 38
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.