Prupe.1G474400_v2.0.a1

serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
Physical Location & Seq
Forward (+)
39422003 .. 39422275
273 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G474400.1

Sequence Viewer

Length: 273 bp
ATGGAGTTGATGGATCCAACATTGAGGAATTATTTTTCAAGCACTGAAGTCACCAGATGCATTCAGATGGGTCTTTTGTGTGTGCAAGAAAGAGCTATGGACCGACCAACCATGTCAGATGTTGTTTCAACGCTAAGCAACGAAACAATTGCTCTACCTCTTCCTAAAGAACCTGCATTTTTGAGTCGATCCAGTGATGCAGAATTATCTTCAAGTAGGCAAAGACGTCACTCTGGATATGATATAACGATTTCAGAAGTAGATGGAAGGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

91

Amino Acids

10.13

Weight (kDa)

5.02

Isoelectric Point (pI)

61.17

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0024598)

Species Orthologous Gene IDs
prunus_persica Prupe.1G474400_v2.0.a1
rosa_rugosa Rorug05G0086800
rosa_samantha Rh5CG195200

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 229
Acc36I ACCTGC 1 cut(s) 181
AclWI GGATC 3 cut(s) 8, 21, 183
AcuI CTGAAG 1 cut(s) 66
AcyI GRCGYC 1 cut(s) 226
AgsI TTSAA 3 cut(s) 39, 129, 213
AluBI AGCT 1 cut(s) 95
AluI AGCT 1 cut(s) 95
AlwI GGATC 3 cut(s) 8, 21, 183
AspS9I GGNCC 1 cut(s) 100
AsuHPI GGTGA 1 cut(s) 43
AvaII GGWCC 1 cut(s) 100
BamHI GGATCC 1 cut(s) 13
BccI CCATC 3 cut(s) 4, 61, 257
BcgI CGANNNNNNTGC 2 cut(s) 131, 165
BfuAI ACCTGC 1 cut(s) 181
BlpI GCTNAGC 1 cut(s) 134
Bme18I GGWCC 1 cut(s) 100
BmgT120I GGNCC 1 cut(s) 100
BmiI GGNNCC 1 cut(s) 15
BmsI GCATC 2 cut(s) 47, 187
Bpu1102I GCTNAGC 1 cut(s) 134
BsaHI GRCGYC 1 cut(s) 226
Bse1I ACTGG 1 cut(s) 192
BseNI ACTGG 1 cut(s) 192
BsmI GAATGC 1 cut(s) 60
Bsp143I GATC 2 cut(s) 13, 188
Bsp1720I GCTNAGC 1 cut(s) 134
BspLI GGNNCC 1 cut(s) 15
BspMI ACCTGC 1 cut(s) 181
BspPI GGATC 3 cut(s) 8, 21, 183
BsrI ACTGG 1 cut(s) 192
BssMI GATC 2 cut(s) 13, 188
BssNI GRCGYC 1 cut(s) 226
Bst6I CTCTTC 1 cut(s) 165
BstACI GRCGYC 1 cut(s) 226
BstDEI CTNAG 1 cut(s) 134
BstKTI GATC 2 cut(s) 16, 191
BstMBI GATC 2 cut(s) 13, 188
BstX2I RGATCY 1 cut(s) 13
BstYI RGATCY 1 cut(s) 13
BtsIMutI CAGTG 2 cut(s) 42, 199
BveI ACCTGC 1 cut(s) 181
Cfr13I GGNCC 1 cut(s) 100
CviAII CATG 1 cut(s) 112
CviJI RGCY 1 cut(s) 95
CviKI_1 RGCY 1 cut(s) 95
DdeI CTNAG 1 cut(s) 134
DpnI GATC 2 cut(s) 15, 190
DpnII GATC 2 cut(s) 13, 188
Eam1104I CTCTTC 1 cut(s) 165
EarI CTCTTC 1 cut(s) 165
Eco47I GGWCC 1 cut(s) 100
Eco57I CTGAAG 1 cut(s) 66
EcoT22I ATGCAT 1 cut(s) 62
FaeI CATG 1 cut(s) 115
FaiI YATR 4 cut(s) 98, 113, 240, 245
FatI CATG 1 cut(s) 111
Hin1I GRCGYC 1 cut(s) 226
Hin1II CATG 1 cut(s) 115
HinfI GANTC 1 cut(s) 184
HphI GGTGA 1 cut(s) 43
Hpy188I TCNGA 3 cut(s) 66, 118, 256
Hpy188III TCNNGA 1 cut(s) 234
HpyAV CCTTC 1 cut(s) 261
HpyCH4IV ACGT 1 cut(s) 226
HpyCH4V TGCA 4 cut(s) 60, 85, 176, 200
HpyF3I CTNAG 1 cut(s) 134
HpySE526I ACGT 1 cut(s) 226
Hsp92I GRCGYC 1 cut(s) 226
Hsp92II CATG 1 cut(s) 115
Kzo9I GATC 2 cut(s) 13, 188
LpnPI CCDG 4 cut(s) 67, 186, 205, 219
LweI GCATC 2 cut(s) 47, 187
MaeII ACGT 1 cut(s) 226
MaeIII GTNAC 2 cut(s) 49, 227
MalI GATC 2 cut(s) 15, 190
MboI GATC 2 cut(s) 13, 188
MboII GAAGA 2 cut(s) 152, 201
MfeI CAATTG 1 cut(s) 147
MflI RGATCY 1 cut(s) 13
MluCI AATT 3 cut(s) 28, 147, 203
MlyI GAGTC 1 cut(s) 193
MmeI TCCRAC 1 cut(s) 41
MnlI CCTC 2 cut(s) 18, 168
Mph1103I ATGCAT 1 cut(s) 62
MslI CAYNNNNRTG 1 cut(s) 65
MunI CAATTG 1 cut(s) 147
Mva1269I GAATGC 1 cut(s) 60
NdeII GATC 2 cut(s) 13, 188
NlaIII CATG 1 cut(s) 115
NlaIV GGNNCC 1 cut(s) 15
NmuCI GTSAC 2 cut(s) 49, 227
NsiI ATGCAT 1 cut(s) 62
PctI GAATGC 1 cut(s) 60
PleI GAGTC 1 cut(s) 192
PpsI GAGTC 1 cut(s) 192
PspN4I GGNNCC 1 cut(s) 15
PspPI GGNCC 1 cut(s) 100
PsuI RGATCY 1 cut(s) 13
RseI CAYNNNNRTG 1 cut(s) 65
Sau3AI GATC 2 cut(s) 13, 188
Sau96I GGNCC 1 cut(s) 100
SchI GAGTC 1 cut(s) 193
SetI ASST 5 cut(s) 97, 160, 175, 229, 272
SfaNI GCATC 2 cut(s) 47, 187
SgeI CNNG 8 cut(s) 51, 66, 98, 124, 185, 204, 225, 246
SinI GGWCC 1 cut(s) 100
SmiMI CAYNNNNRTG 1 cut(s) 65
Sse9I AATT 3 cut(s) 28, 147, 203
TaiI ACGT 1 cut(s) 229
TaqI TCGA 1 cut(s) 187
TaqII GACCGA 1 cut(s) 117
TasI AATT 3 cut(s) 28, 147, 203
TscAI CASTG 2 cut(s) 49, 199
TseFI GTSAC 2 cut(s) 49, 227
Tsp45I GTSAC 2 cut(s) 49, 227
TspRI CASTG 2 cut(s) 49, 199
VpaK11BI GGWCC 1 cut(s) 100
ZraI GACGTC 1 cut(s) 227
Zsp2I ATGCAT 1 cut(s) 62
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.