Prupe.1G569500_v2.0.a1
ERF Family

2OG-Fe(II) oxygenase superfamily

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
OG0022335
Physical Location & Seq
Reverse (-)
46433633 .. 46437167
3535 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G569500.2

Sequence Viewer

Length: 1464 bp
ATGAGGACTGAAGAAGAGTCCAGAAGTGTCACTGCTTGCCAAGACTGGATGAGTTTGCTGAGGACTTTAGAACGCGACCAAATTTTGCAGGTTTTGTCAGATGGGTTTTGCCGAAACTGCCAAGTCCTCTTGAAGGATCGAATTCACAAAAAAGTAGGTGATGTATCCTTTTCTAGTGATAATAACAAAAGGGCTGTGGATGTACCAAGCCAGTCCGGGAATGCACCAATTGCGCGGTCATCGGAGAATGCTAGTATGGAGTCATGTGATAAAAGGTTTGACCAACAAGAGTGCACTCCACCCCAAACAATTCCTATCCACTCATCAACGCAGAGAGGGTACACTGCTAATTCTTGGCCCGCATCCATAAACAGCAAAAGGAATTCAGTTGAGCACTCAGCTTCTCCAGTATTATTCAATGATGCAACCAGAGGAGATTCCTCTTTCATTTGTGGTGGATTATTGGAGGATCCAAACAAGCATAATCGAGTATTACAAGTTGGGAGAGAGAAGGACTTCATCCACATTGAGAGTATAAATGGTAGACGAACAAATGTGCTACAGGGCTTAGAGCTACATACTCAGGTTTTTAATGCCAATGAGCAGAAGGAGATTGTTGATTGTGTCTACAATTTACAACGTATGGGGCAAAGGGGACAACTTAGAGAGCGGACATATTCCGAACCTAGAAAGTGGATGCGTGGTAAAGGACGTGTAACAATACAATTTGGTTGTTGTTACAATTATGCAGTGGATAGGAATGGGAACCCGCCAGGTATTGTTAGAAATGAAGATGTGGATCCCCTACCCCCTTTGTTCAAGCAAATGATAAAGAGGATGGTCAGTTGGCATATATTACCTCCAACATGCATCCCTGACAGCTGCATTGTGAATATATACGATGAAGGGGATTGTATTCCTCCTCATATTGACCATCATGATTTTGTTAGACCTTTCTGCACGGTTTCATTTTTGACAGAATGCGACATACTTTTTGGTTCAAATCTAAAGGTTGTGGGTCCAGGAGAGTTTTCGGGACCTGTTTCTCTACCTTTGCCTGTTGGGTCAGTGCTTATTCTAAATGGTAATGCAGCTGACATTGCTAAGCATTGTGTACCTGGTGTTCCAGCAAGAAGGATTTCAATTACTTTCAGAAAAATGGATAATAGCAAGATTCCATACAATTTTTCTCACGATCCAGAGCTTCAGGAAATGAAACCTTTTGTTCATTCTCCCTTTTCCAAATCAAAAATCCCGCAAGATGAACAAGGAAAACCTTATTCCTATTTTCCAGTCAAGTCACAAGTCCAACATAACTTGCATCAAGACGATGAACTTAACCGTACTGAATCCAAGAGTGGTAAGAAGCGGAATATTAACCCTTCTTTTGTTCTTGAGAAAGATGATTTCCCTCCCCTTGGCAGTTTAAGGTCTGTGAACAGACGGAACGTTAGCAGACAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
2OG-FeII_Oxy_2

Protein Analysis

488

Amino Acids

55.08

Weight (kDa)

8.43

Isoelectric Point (pI)

62.77

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0022335)

Species Orthologous Gene IDs
malus_domestica MD15G1423500.v1.1
prunus_persica Prupe.1G569500_v2.0.a1 Prupe.1G569500_v2.0.a1
pyrus_communis pycom15g37550

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 79
AccBSI CCGCTC 1 cut(s) 670
AccI GTMKAC 2 cut(s) 544, 627
AccII CGCG 2 cut(s) 75, 235
AciI CCGC 6 cut(s) 235, 360, 670, 770, 1256, 1369
AclI AACGTT 1 cut(s) 1449
AclWI GGATC 6 cut(s) 144, 464, 477, 794, 807, 1190
AcsI RAATTY 3 cut(s) 81, 141, 382
AcuI CTGAAG 2 cut(s) 30, 1190
AfaI GTAC 4 cut(s) 204, 341, 1116, 1345
AfiI CCNNNNNNNGG 2 cut(s) 133, 1418
AflIII ACRYGT 1 cut(s) 712
AgsI TTSAA 5 cut(s) 133, 418, 820, 1002, 1143
AjiI CACGTC 1 cut(s) 713
AjnI CCWGG 3 cut(s) 772, 1021, 1117
AluBI AGCT 5 cut(s) 401, 574, 882, 1094, 1204
AluI AGCT 5 cut(s) 401, 574, 882, 1094, 1204
Alw21I GWGCWC 2 cut(s) 296, 396
Alw44I GTGCAC 1 cut(s) 292
AlwI GGATC 6 cut(s) 144, 464, 477, 794, 807, 1190
AoxI GGCC 1 cut(s) 356
ApaLI GTGCAC 1 cut(s) 292
ApeKI GCWGC 2 cut(s) 882, 1091
ApoI RAATTY 3 cut(s) 81, 141, 382
ArsI GACNNNNNNTTYG 2 cut(s) 977, 1009
Asp700I GAANNNNTTC 2 cut(s) 515, 1138
AspLEI GCGC 1 cut(s) 235
AspS9I GGNCC 3 cut(s) 357, 1019, 1037
AsuC2I CCSGG 1 cut(s) 217
AsuHPI GGTGA 1 cut(s) 170
AvaII GGWCC 2 cut(s) 1019, 1037
BaeGI GKGCMC 1 cut(s) 296
BamHI GGATCC 2 cut(s) 469, 799
Bbv12I GWGCWC 2 cut(s) 296, 396
BbvCI CCTCAGC 1 cut(s) 59
BbvI GCAGC 2 cut(s) 869, 1103
BccI CCATC 3 cut(s) 95, 832, 942
BciT130I CCWGG 3 cut(s) 774, 1023, 1119
BciVI GTATCC 1 cut(s) 175
BcnI CCSGG 1 cut(s) 217
BfaI CTAG 3 cut(s) 174, 252, 687
BfmI CTRYAG 1 cut(s) 560
BfuAI ACCTGC 1 cut(s) 79
BfuI GTATCC 1 cut(s) 175
BisI GCNGC 2 cut(s) 883, 1092
BlpI GCTNAGC 1 cut(s) 1104
BlsI GCNGC 2 cut(s) 884, 1093
Bme1390I CCNGG 4 cut(s) 217, 774, 1023, 1119
Bme18I GGWCC 2 cut(s) 1019, 1037
BmgBI CACGTC 1 cut(s) 713
BmgT120I GGNCC 3 cut(s) 357, 1019, 1037
BmiI GGNNCC 5 cut(s) 471, 767, 801, 1020, 1038
BmrFI CCNGG 4 cut(s) 217, 774, 1023, 1119
BmsI GCATC 5 cut(s) 371, 412, 687, 879, 1330
BpmI CTGGAG 1 cut(s) 390
Bpu10I CCTNAGC 1 cut(s) 59
Bpu1102I GCTNAGC 1 cut(s) 1104
BpuEI CTTGAG 1 cut(s) 1415
BpuMI CCSGG 1 cut(s) 217
BsaBI GATNNNNATC 1 cut(s) 798
BsaJI CCNNGG 1 cut(s) 1417
Bsc4I CCNNNNNNNGG 2 cut(s) 133, 1418
Bse1I ACTGG 4 cut(s) 50, 211, 407, 1292
Bse3DI GCAATG 1 cut(s) 1098
Bse8I GATNNNNATC 1 cut(s) 798
BseBI CCWGG 3 cut(s) 774, 1023, 1119
BseDI CCNNGG 1 cut(s) 1417
BseGI GGATG 7 cut(s) 54, 205, 362, 519, 702, 843, 870
BseJI GATNNNNATC 1 cut(s) 798
BseLI CCNNNNNNNGG 2 cut(s) 133, 1418
BseMI GCAATG 1 cut(s) 1098
BseMII CTCAG 3 cut(s) 50, 411, 596
BseNI ACTGG 4 cut(s) 50, 211, 407, 1292
BseRI GAGGAG 2 cut(s) 447, 912
BseSI GKGCMC 1 cut(s) 296
BseXI GCAGC 2 cut(s) 869, 1103
BsgI GTGCAG 1 cut(s) 943
Bsh1236I CGCG 2 cut(s) 75, 235
BshFI GGCC 1 cut(s) 358
BsiHKAI GWGCWC 2 cut(s) 296, 396
BsiSI CCGG 1 cut(s) 216
BslFI GGGAC 2 cut(s) 669, 1050
BslI CCNNNNNNNGG 2 cut(s) 133, 1418
BsmFI GGGAC 2 cut(s) 669, 1050
BsmI GAATGC 3 cut(s) 226, 253, 986
BsnI GGCC 1 cut(s) 358
Bsp1286I GDGCHC 2 cut(s) 296, 396
Bsp143I GATC 4 cut(s) 136, 469, 799, 1195
Bsp1720I GCTNAGC 1 cut(s) 1104
BspACI CCGC 6 cut(s) 235, 360, 670, 770, 1256, 1369
BspANI GGCC 1 cut(s) 358
BspCNI CTCAG 3 cut(s) 51, 410, 595
BspFNI CGCG 2 cut(s) 75, 235
BspHI TCATGA 1 cut(s) 937
BspLI GGNNCC 5 cut(s) 471, 767, 801, 1020, 1038
BspMI ACCTGC 1 cut(s) 79
BspPI GGATC 6 cut(s) 144, 464, 477, 794, 807, 1190
BsrBI CCGCTC 1 cut(s) 670
BsrDI GCAATG 1 cut(s) 1098
BsrI ACTGG 4 cut(s) 50, 211, 407, 1292
BssECI CCNNGG 1 cut(s) 1417
BssMI GATC 4 cut(s) 136, 469, 799, 1195
BssT1I CCWWGG 1 cut(s) 1417
Bst2UI CCWGG 3 cut(s) 774, 1023, 1119
Bst4CI ACNGT 2 cut(s) 964, 1343
Bst6I CTCTTC 1 cut(s) 9
BstAPI GCANNNNNTGC 1 cut(s) 230
BstC8I GCNNGC 2 cut(s) 37, 360
BstDEI CTNAG 6 cut(s) 59, 397, 568, 582, 662, 1104
BstENI CCTNNNNNAGG 1 cut(s) 131
BstF5I GGATG 7 cut(s) 54, 205, 362, 519, 702, 843, 870
BstFNI CGCG 2 cut(s) 75, 235
BstHHI GCGC 1 cut(s) 235
BstKTI GATC 4 cut(s) 139, 472, 802, 1198
BstMBI GATC 4 cut(s) 136, 469, 799, 1195
BstMWI GCNNNNNNNGC 3 cut(s) 117, 230, 1100
BstNI CCWGG 3 cut(s) 774, 1023, 1119
BstNSI RCATGY 1 cut(s) 870
BstSCI CCNGG 4 cut(s) 215, 772, 1021, 1117
BstSFI CTRYAG 1 cut(s) 560
BstSLI GKGCMC 1 cut(s) 296
BstUI CGCG 2 cut(s) 75, 235
BstV1I GCAGC 2 cut(s) 869, 1103
BstX2I RGATCY 2 cut(s) 469, 799
BstYI RGATCY 2 cut(s) 469, 799
BsuI GTATCC 1 cut(s) 175
BsuRI GGCC 1 cut(s) 358
BtrI CACGTC 1 cut(s) 713
BtsCI GGATG 7 cut(s) 54, 205, 362, 519, 702, 843, 870
BtsI GCAGTG 3 cut(s) 30, 342, 756
BtsIMutI CAGTG 4 cut(s) 30, 342, 756, 1074
BveI ACCTGC 1 cut(s) 79
Cac8I GCNNGC 2 cut(s) 37, 360
CciI TCATGA 1 cut(s) 937
CfoI GCGC 1 cut(s) 235
Cfr13I GGNCC 3 cut(s) 357, 1019, 1037
CsiI ACCWGGT 1 cut(s) 1117
Csp6I GTAC 4 cut(s) 203, 340, 1115, 1344
CviAII CATG 3 cut(s) 264, 867, 938
CviJI RGCY 9 cut(s) 194, 210, 358, 401, 567, 574, 882, 1094, 1204
CviKI_1 RGCY 9 cut(s) 194, 210, 358, 401, 567, 574, 882, 1094, 1204
CviQI GTAC 4 cut(s) 203, 340, 1115, 1344
DdeI CTNAG 6 cut(s) 59, 397, 568, 582, 662, 1104
DpnI GATC 4 cut(s) 138, 471, 801, 1197
DpnII GATC 4 cut(s) 136, 469, 799, 1195
Eam1104I CTCTTC 1 cut(s) 9
EarI CTCTTC 1 cut(s) 9
Eco130I CCWWGG 1 cut(s) 1417
Eco47I GGWCC 2 cut(s) 1019, 1037
Eco57I CTGAAG 2 cut(s) 30, 1190
EcoNI CCTNNNNNAGG 1 cut(s) 131
EcoO109I RGGNCCY 1 cut(s) 1037
EcoRI GAATTC 2 cut(s) 141, 382
EcoRII CCWGG 3 cut(s) 772, 1021, 1117
EcoT14I CCWWGG 1 cut(s) 1417
EcoT22I ATGCAT 1 cut(s) 872
ErhI CCWWGG 1 cut(s) 1417
FaeI CATG 3 cut(s) 267, 870, 941
FaqI GGGAC 2 cut(s) 669, 1050
FatI CATG 3 cut(s) 263, 866, 937
FauI CCCGC 3 cut(s) 367, 777, 1263
FblI GTMKAC 2 cut(s) 544, 627
Fnu4HI GCNGC 2 cut(s) 883, 1092
FokI GGATG 7 cut(s) 61, 212, 349, 506, 709, 850, 857
Fsp4HI GCNGC 2 cut(s) 883, 1092
FspBI CTAG 3 cut(s) 174, 252, 687
GlaI GCGC 1 cut(s) 234
GluI GCNGC 2 cut(s) 883, 1092
GsuI CTGGAG 1 cut(s) 390
HaeIII GGCC 1 cut(s) 358
HapII CCGG 1 cut(s) 216
HhaI GCGC 1 cut(s) 235
Hin1II CATG 3 cut(s) 267, 870, 941
Hin6I GCGC 1 cut(s) 233
HinP1I GCGC 1 cut(s) 233
HinfI GANTC 5 cut(s) 17, 260, 437, 1174, 1349
HpaII CCGG 1 cut(s) 216
HphI GGTGA 1 cut(s) 170
Hpy166II GTNNAC 6 cut(s) 294, 342, 545, 628, 1115, 1438
Hpy188I TCNGA 4 cut(s) 100, 244, 682, 1154
Hpy188III TCNNGA 9 cut(s) 21, 130, 938, 1035, 1193, 1199, 1208, 1325, 1394
Hpy8I GTNNAC 6 cut(s) 294, 342, 545, 628, 1115, 1438
HpyAV CCTTC 6 cut(s) 127, 505, 601, 899, 1128, 1392
HpyCH4III ACNGT 2 cut(s) 964, 1343
HpyCH4IV ACGT 3 cut(s) 640, 712, 1449
HpyF10VI GCNNNNNNNGC 3 cut(s) 117, 230, 1100
HpyF3I CTNAG 6 cut(s) 59, 397, 568, 582, 662, 1104
HpySE526I ACGT 3 cut(s) 640, 712, 1449
Hsp92II CATG 3 cut(s) 267, 870, 941
HspAI GCGC 1 cut(s) 233
Kzo9I GATC 4 cut(s) 136, 469, 799, 1195
Lsp1109I GCAGC 2 cut(s) 869, 1103
LweI GCATC 5 cut(s) 371, 412, 687, 879, 1330
MabI ACCWGGT 1 cut(s) 1117
MaeI CTAG 3 cut(s) 174, 252, 687
MaeII ACGT 3 cut(s) 640, 712, 1449
MaeIII GTNAC 4 cut(s) 28, 715, 737, 1299
MalI GATC 4 cut(s) 138, 471, 801, 1197
MbiI CCGCTC 1 cut(s) 670
MboI GATC 4 cut(s) 136, 469, 799, 1195
MboII GAAGA 3 cut(s) 23, 26, 803
MfeI CAATTG 1 cut(s) 228
MflI RGATCY 2 cut(s) 469, 799
MhlI GDGCHC 2 cut(s) 296, 396
MlyI GAGTC 2 cut(s) 26, 269
MmeI TCCRAC 2 cut(s) 887, 1333
Mph1103I ATGCAT 1 cut(s) 872
MroXI GAANNNNTTC 2 cut(s) 515, 1138
MseI TTAA 4 cut(s) 591, 1338, 1377, 1427
MspA1I CMGCKG 2 cut(s) 882, 1094
MspI CCGG 1 cut(s) 216
MspR9I CCNGG 4 cut(s) 217, 774, 1023, 1119
MunI CAATTG 1 cut(s) 228
Mva1269I GAATGC 3 cut(s) 226, 253, 986
MvaI CCWGG 3 cut(s) 774, 1023, 1119
MvnI CGCG 2 cut(s) 75, 235
MwoI GCNNNNNNNGC 3 cut(s) 117, 230, 1100
NciI CCSGG 1 cut(s) 217
NdeII GATC 4 cut(s) 136, 469, 799, 1195
NlaIII CATG 3 cut(s) 267, 870, 941
NlaIV GGNNCC 5 cut(s) 471, 767, 801, 1020, 1038
NmuCI GTSAC 2 cut(s) 28, 1299
NsiI ATGCAT 1 cut(s) 872
NspI RCATGY 1 cut(s) 870
PagI TCATGA 1 cut(s) 937
PctI GAATGC 3 cut(s) 226, 253, 986
PdmI GAANNNNTTC 2 cut(s) 515, 1138
PfeI GAWTC 3 cut(s) 437, 1174, 1349
PfoI TCCNGGA 2 cut(s) 215, 1021
PkrI GCNGC 2 cut(s) 884, 1093
PleI GAGTC 2 cut(s) 25, 268
PpsI GAGTC 2 cut(s) 25, 268
PpuMI RGGWCCY 1 cut(s) 1037
Psp1406I AACGTT 1 cut(s) 1449
Psp5II RGGWCCY 1 cut(s) 1037
Psp6I CCWGG 3 cut(s) 772, 1021, 1117
PspGI CCWGG 3 cut(s) 772, 1021, 1117
PspN4I GGNNCC 5 cut(s) 471, 767, 801, 1020, 1038
PspPI GGNCC 3 cut(s) 357, 1019, 1037
PspPPI RGGWCCY 1 cut(s) 1037
PsrI GAACNNNNNNTAC 2 cut(s) 1107, 1139
PsuI RGATCY 2 cut(s) 469, 799
PvuII CAGCTG 2 cut(s) 882, 1094
RsaI GTAC 4 cut(s) 204, 341, 1116, 1345
RsaNI GTAC 4 cut(s) 203, 340, 1115, 1344
SaqAI TTAA 4 cut(s) 591, 1338, 1377, 1427
SatI GCNGC 2 cut(s) 883, 1092
Sau3AI GATC 4 cut(s) 136, 469, 799, 1195
Sau96I GGNCC 3 cut(s) 357, 1019, 1037
SchI GAGTC 2 cut(s) 26, 269
ScrFI CCNGG 4 cut(s) 217, 774, 1023, 1119
SduI GDGCHC 2 cut(s) 296, 396
SexAI ACCWGGT 1 cut(s) 1117
SfaNI GCATC 5 cut(s) 371, 412, 687, 879, 1330
SfcI CTRYAG 1 cut(s) 560
SinI GGWCC 2 cut(s) 1019, 1037
SmlI CTYRAG 1 cut(s) 1394
SmoI CTYRAG 1 cut(s) 1394
SsiI CCGC 6 cut(s) 235, 360, 670, 770, 1256, 1369
SspI AATATT 1 cut(s) 1375
SspMI CTAG 3 cut(s) 174, 252, 687
StyD4I CCNGG 4 cut(s) 215, 772, 1021, 1117
StyI CCWWGG 1 cut(s) 1417
TaaI ACNGT 2 cut(s) 964, 1343
TaiI ACGT 3 cut(s) 643, 715, 1452
TaqI TCGA 2 cut(s) 139, 487
TfiI GAWTC 3 cut(s) 437, 1174, 1349
Tru1I TTAA 4 cut(s) 591, 1338, 1377, 1427
Tru9I TTAA 4 cut(s) 591, 1338, 1377, 1427
TscAI CASTG 4 cut(s) 37, 349, 756, 1074
TseFI GTSAC 2 cut(s) 28, 1299
TseI GCWGC 2 cut(s) 882, 1091
Tsp45I GTSAC 2 cut(s) 28, 1299
TspDTI ATGAA 9 cut(s) 436, 508, 804, 918, 957, 1217, 1229, 1278, 1347
TspGWI ACGGA 1 cut(s) 1459
TspRI CASTG 4 cut(s) 37, 349, 756, 1074
VneI GTGCAC 1 cut(s) 292
VpaK11BI GGWCC 2 cut(s) 1019, 1037
XagI CCTNNNNNAGG 1 cut(s) 131
XapI RAATTY 3 cut(s) 81, 141, 382
XceI RCATGY 1 cut(s) 870
XmiI GTMKAC 2 cut(s) 544, 627
XmnI GAANNNNTTC 2 cut(s) 515, 1138
XspI CTAG 3 cut(s) 174, 252, 687
Zsp2I ATGCAT 1 cut(s) 872
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.