Pentatricopeptide repeat-containing protein
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| Species | Orthologous Gene IDs |
|---|---|
| prunus_persica | Prupe.1G571700_v2.0.a1 Prupe.1G571700_v2.0.a1 Prupe.1G571700_v2.0.a1 Prupe.1G571700_v2.0.a1 Prupe.8G043900_v2.0.a1 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 2 cut(s) | 1036, 1337 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 457, 959 |
| AccII | CGCG | 1 cut(s) | 168 |
| AccIII | TCCGGA | 1 cut(s) | 862 |
| AciI | CCGC | 3 cut(s) | 166, 1092, 1252 |
| AclWI | GGATC | 9 cut(s) | 66, 302, 315, 513, 526, 860, 873, 1482, 1635 |
| AcoI | YGGCCR | 1 cut(s) | 1363 |
| AcsI | RAATTY | 5 cut(s) | 403, 469, 628, 1121, 1182 |
| AfaI | GTAC | 3 cut(s) | 964, 1171, 1510 |
| AfiI | CCNNNNNNNGG | 8 cut(s) | 457, 710, 737, 764, 791, 959, 1471, 1723 |
| AflIII | ACRYGT | 1 cut(s) | 838 |
| AjiI | CACGTC | 1 cut(s) | 658 |
| Alw21I | GWGCWC | 4 cut(s) | 222, 323, 1623, 2135 |
| Alw26I | GTCTC | 3 cut(s) | 1158, 1880, 1948 |
| AlwI | GGATC | 9 cut(s) | 66, 302, 315, 513, 526, 860, 873, 1482, 1635 |
| Ama87I | CYCGRG | 2 cut(s) | 1465, 1622 |
| Aor13HI | TCCGGA | 1 cut(s) | 862 |
| AoxI | GGCC | 3 cut(s) | 1300, 1363, 1690 |
| ApeKI | GCWGC | 9 cut(s) | 149, 439, 442, 826, 1042, 1426, 1651, 1748, 1983 |
| ApoI | RAATTY | 5 cut(s) | 403, 469, 628, 1121, 1182 |
| AspLEI | GCGC | 3 cut(s) | 149, 170, 1753 |
| AsuHPI | GGTGA | 2 cut(s) | 1989, 2045 |
| AvaI | CYCGRG | 2 cut(s) | 1465, 1622 |
| BalI | TGGCCA | 1 cut(s) | 1365 |
| BamHI | GGATCC | 3 cut(s) | 307, 518, 865 |
| BanII | GRGCYC | 3 cut(s) | 289, 323, 1623 |
| BauI | CACGAG | 2 cut(s) | 215, 288 |
| BbsI | GAAGAC | 1 cut(s) | 1586 |
| Bbv12I | GWGCWC | 4 cut(s) | 222, 323, 1623, 2135 |
| BbvCI | CCTCAGC | 1 cut(s) | 1979 |
| BbvI | GCAGC | 9 cut(s) | 136, 426, 429, 838, 1054, 1413, 1663, 1760, 1995 |
| BccI | CCATC | 6 cut(s) | 34, 290, 392, 455, 1355, 2117 |
| BcoDI | GTCTC | 3 cut(s) | 1158, 1880, 1948 |
| BfaI | CTAG | 9 cut(s) | 678, 705, 759, 786, 1034, 1109, 1502, 1655, 1890 |
| BfmI | CTRYAG | 5 cut(s) | 207, 443, 1393, 1413, 1597 |
| BfuAI | ACCTGC | 2 cut(s) | 1036, 1337 |
| BglII | AGATCT | 1 cut(s) | 1020 |
| BisI | GCNGC | 9 cut(s) | 150, 440, 443, 827, 1043, 1427, 1652, 1749, 1984 |
| BlpI | GCTNAGC | 1 cut(s) | 1638 |
| BlsI | GCNGC | 9 cut(s) | 151, 441, 444, 828, 1044, 1428, 1653, 1750, 1985 |
| BmeT110I | CYCGRG | 2 cut(s) | 1465, 1622 |
| BmgBI | CACGTC | 1 cut(s) | 658 |
| BmiI | GGNNCC | 5 cut(s) | 309, 520, 867, 1560, 1775 |
| BpiI | GAAGAC | 1 cut(s) | 1586 |
| BpmI | CTGGAG | 2 cut(s) | 379, 1648 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1979 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 1638 |
| BpuEI | CTTGAG | 1 cut(s) | 879 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1062 |
| BsaJI | CCNNGG | 1 cut(s) | 1303 |
| BsaWI | WCCGGW | 1 cut(s) | 862 |
| Bsc4I | CCNNNNNNNGG | 8 cut(s) | 457, 710, 737, 764, 791, 959, 1471, 1723 |
| Bse1I | ACTGG | 2 cut(s) | 189, 462 |
| Bse3DI | GCAATG | 1 cut(s) | 263 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1062 |
| BseAI | TCCGGA | 1 cut(s) | 862 |
| BseDI | CCNNGG | 1 cut(s) | 1303 |
| BseGI | GGATG | 3 cut(s) | 161, 466, 1810 |
| BseJI | GATNNNNATC | 1 cut(s) | 1062 |
| BseLI | CCNNNNNNNGG | 8 cut(s) | 457, 710, 737, 764, 791, 959, 1471, 1723 |
| BseMI | GCAATG | 1 cut(s) | 263 |
| BseMII | CTCAG | 6 cut(s) | 47, 228, 1323, 1629, 1806, 1993 |
| BseNI | ACTGG | 2 cut(s) | 189, 462 |
| BseRI | GAGGAG | 2 cut(s) | 148, 1967 |
| BseXI | GCAGC | 9 cut(s) | 136, 426, 429, 838, 1054, 1413, 1663, 1760, 1995 |
| BseYI | CCCAGC | 2 cut(s) | 312, 1987 |
| BsgI | GTGCAG | 1 cut(s) | 312 |
| Bsh1236I | CGCG | 1 cut(s) | 168 |
| BshFI | GGCC | 3 cut(s) | 1302, 1365, 1692 |
| BsiHKAI | GWGCWC | 4 cut(s) | 222, 323, 1623, 2135 |
| BsiHKCI | CYCGRG | 2 cut(s) | 1465, 1622 |
| BsiSI | CCGG | 1 cut(s) | 863 |
| BslFI | GGGAC | 2 cut(s) | 1283, 1448 |
| BslI | CCNNNNNNNGG | 8 cut(s) | 457, 710, 737, 764, 791, 959, 1471, 1723 |
| BsmAI | GTCTC | 3 cut(s) | 1158, 1880, 1948 |
| BsmFI | GGGAC | 2 cut(s) | 1283, 1448 |
| BsnI | GGCC | 3 cut(s) | 1302, 1365, 1692 |
| BsoBI | CYCGRG | 2 cut(s) | 1465, 1622 |
| Bsp1286I | GDGCHC | 5 cut(s) | 222, 289, 323, 1623, 2135 |
| Bsp13I | TCCGGA | 1 cut(s) | 862 |
| Bsp143I | GATC | 9 cut(s) | 71, 307, 518, 865, 1020, 1474, 1627, 1912, 2055 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 1638 |
| BspACI | CCGC | 3 cut(s) | 166, 1092, 1252 |
| BspANI | GGCC | 3 cut(s) | 1302, 1365, 1692 |
| BspCNI | CTCAG | 6 cut(s) | 46, 229, 1324, 1630, 1807, 1992 |
| BspEI | TCCGGA | 1 cut(s) | 862 |
| BspFNI | CGCG | 1 cut(s) | 168 |
| BspLI | GGNNCC | 5 cut(s) | 309, 520, 867, 1560, 1775 |
| BspMAI | CTGCAG | 2 cut(s) | 447, 1601 |
| BspMI | ACCTGC | 2 cut(s) | 1036, 1337 |
| BspPI | GGATC | 9 cut(s) | 66, 302, 315, 513, 526, 860, 873, 1482, 1635 |
| BsrDI | GCAATG | 1 cut(s) | 263 |
| BsrI | ACTGG | 2 cut(s) | 189, 462 |
| BssECI | CCNNGG | 1 cut(s) | 1303 |
| BssMI | GATC | 9 cut(s) | 71, 307, 518, 865, 1020, 1474, 1627, 1912, 2055 |
| BssSI | CACGAG | 2 cut(s) | 215, 288 |
| BssT1I | CCWWGG | 1 cut(s) | 1303 |
| Bst2BI | CACGAG | 2 cut(s) | 215, 288 |
| Bst4CI | ACNGT | 2 cut(s) | 690, 1152 |
| Bst6I | CTCTTC | 3 cut(s) | 115, 190, 966 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1289 |
| BstC8I | GCNNGC | 6 cut(s) | 807, 1086, 1090, 1290, 1690, 1941 |
| BstDEI | CTNAG | 9 cut(s) | 33, 237, 1293, 1332, 1638, 1815, 1841, 1979, 2100 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 1721 |
| BstF5I | GGATG | 3 cut(s) | 161, 466, 1810 |
| BstFNI | CGCG | 1 cut(s) | 168 |
| BstHHI | GCGC | 3 cut(s) | 149, 170, 1753 |
| BstKTI | GATC | 9 cut(s) | 74, 310, 521, 868, 1023, 1477, 1630, 1915, 2058 |
| BstMAI | GTCTC | 3 cut(s) | 1158, 1880, 1948 |
| BstMBI | GATC | 9 cut(s) | 71, 307, 518, 865, 1020, 1474, 1627, 1912, 2055 |
| BstMWI | GCNNNNNNNGC | 7 cut(s) | 421, 996, 1039, 1289, 1618, 1648, 1940 |
| BstNSI | RCATGY | 2 cut(s) | 842, 1092 |
| BstSFI | CTRYAG | 5 cut(s) | 207, 443, 1393, 1413, 1597 |
| BstUI | CGCG | 1 cut(s) | 168 |
| BstV1I | GCAGC | 9 cut(s) | 136, 426, 429, 838, 1054, 1413, 1663, 1760, 1995 |
| BstV2I | GAAGAC | 1 cut(s) | 1586 |
| BstX2I | RGATCY | 5 cut(s) | 71, 307, 518, 865, 1020 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 842 |
| BstYI | RGATCY | 5 cut(s) | 71, 307, 518, 865, 1020 |
| BsuRI | GGCC | 3 cut(s) | 1302, 1365, 1692 |
| BtrI | CACGTC | 1 cut(s) | 658 |
| BtsCI | GGATG | 3 cut(s) | 161, 466, 1810 |
| BtsIMutI | CAGTG | 1 cut(s) | 196 |
| BveI | ACCTGC | 2 cut(s) | 1036, 1337 |
| Cac8I | GCNNGC | 6 cut(s) | 807, 1086, 1090, 1290, 1690, 1941 |
| CfoI | GCGC | 3 cut(s) | 149, 170, 1753 |
| CseI | GACGC | 1 cut(s) | 653 |
| Csp6I | GTAC | 3 cut(s) | 963, 1170, 1509 |
| CviQI | GTAC | 3 cut(s) | 963, 1170, 1509 |
| DdeI | CTNAG | 9 cut(s) | 33, 237, 1293, 1332, 1638, 1815, 1841, 1979, 2100 |
| DpnI | GATC | 9 cut(s) | 73, 309, 520, 867, 1022, 1476, 1629, 1914, 2057 |
| DpnII | GATC | 9 cut(s) | 71, 307, 518, 865, 1020, 1474, 1627, 1912, 2055 |
| DraI | TTTAAA | 1 cut(s) | 633 |
| EaeI | YGGCCR | 1 cut(s) | 1363 |
| Eam1104I | CTCTTC | 3 cut(s) | 115, 190, 966 |
| EarI | CTCTTC | 3 cut(s) | 115, 190, 966 |
| Ecl136II | GAGCTC | 2 cut(s) | 321, 1621 |
| Eco130I | CCWWGG | 1 cut(s) | 1303 |
| Eco24I | GRGCYC | 3 cut(s) | 289, 323, 1623 |
| Eco53kI | GAGCTC | 2 cut(s) | 321, 1621 |
| Eco88I | CYCGRG | 2 cut(s) | 1465, 1622 |
| EcoICRI | GAGCTC | 2 cut(s) | 321, 1621 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 1721 |
| EcoT14I | CCWWGG | 1 cut(s) | 1303 |
| EcoT22I | ATGCAT | 2 cut(s) | 505, 2050 |
| EcoT38I | GRGCYC | 3 cut(s) | 289, 323, 1623 |
| ErhI | CCWWGG | 1 cut(s) | 1303 |
| FaqI | GGGAC | 2 cut(s) | 1283, 1448 |
| FauI | CCCGC | 2 cut(s) | 173, 1085 |
| Fnu4HI | GCNGC | 9 cut(s) | 150, 440, 443, 827, 1043, 1427, 1652, 1749, 1984 |
| FokI | GGATG | 3 cut(s) | 148, 473, 1797 |
| FriOI | GRGCYC | 3 cut(s) | 289, 323, 1623 |
| Fsp4HI | GCNGC | 9 cut(s) | 150, 440, 443, 827, 1043, 1427, 1652, 1749, 1984 |
| FspBI | CTAG | 9 cut(s) | 678, 705, 759, 786, 1034, 1109, 1502, 1655, 1890 |
| GlaI | GCGC | 3 cut(s) | 148, 169, 1752 |
| GluI | GCNGC | 9 cut(s) | 150, 440, 443, 827, 1043, 1427, 1652, 1749, 1984 |
| GsaI | CCCAGC | 2 cut(s) | 316, 1991 |
| GsuI | CTGGAG | 2 cut(s) | 379, 1648 |
| HaeIII | GGCC | 3 cut(s) | 1302, 1365, 1692 |
| HapII | CCGG | 1 cut(s) | 863 |
| HgaI | GACGC | 1 cut(s) | 653 |
| HhaI | GCGC | 3 cut(s) | 149, 170, 1753 |
| Hin6I | GCGC | 3 cut(s) | 147, 168, 1751 |
| HinP1I | GCGC | 3 cut(s) | 147, 168, 1751 |
| HincII | GTYRAC | 1 cut(s) | 250 |
| HindII | GTYRAC | 1 cut(s) | 250 |
| HindIII | AAGCTT | 2 cut(s) | 926, 1527 |
| HpaII | CCGG | 1 cut(s) | 863 |
| HphI | GGTGA | 2 cut(s) | 1989, 2045 |
| Hpy166II | GTNNAC | 6 cut(s) | 250, 557, 713, 794, 1129, 1997 |
| Hpy188I | TCNGA | 8 cut(s) | 141, 533, 594, 672, 919, 943, 1353, 1714 |
| Hpy8I | GTNNAC | 6 cut(s) | 250, 557, 713, 794, 1129, 1997 |
| HpyAV | CCTTC | 4 cut(s) | 184, 1412, 1858, 1913 |
| HpyCH4III | ACNGT | 2 cut(s) | 690, 1152 |
| HpyCH4IV | ACGT | 3 cut(s) | 384, 657, 1164 |
| HpyF10VI | GCNNNNNNNGC | 7 cut(s) | 421, 996, 1039, 1289, 1618, 1648, 1940 |
| HpyF3I | CTNAG | 9 cut(s) | 33, 237, 1293, 1332, 1638, 1815, 1841, 1979, 2100 |
| HpySE526I | ACGT | 3 cut(s) | 384, 657, 1164 |
| HspAI | GCGC | 3 cut(s) | 147, 168, 1751 |
| Kpn2I | TCCGGA | 1 cut(s) | 862 |
| Kzo9I | GATC | 9 cut(s) | 71, 307, 518, 865, 1020, 1474, 1627, 1912, 2055 |
| LmnI | GCTCC | 2 cut(s) | 1618, 1773 |
| Lsp1109I | GCAGC | 9 cut(s) | 136, 426, 429, 838, 1054, 1413, 1663, 1760, 1995 |
| MaeI | CTAG | 9 cut(s) | 678, 705, 759, 786, 1034, 1109, 1502, 1655, 1890 |
| MaeII | ACGT | 3 cut(s) | 384, 657, 1164 |
| MaeIII | GTNAC | 4 cut(s) | 212, 341, 638, 1874 |
| MalI | GATC | 9 cut(s) | 73, 309, 520, 867, 1022, 1476, 1629, 1914, 2057 |
| MboI | GATC | 9 cut(s) | 71, 307, 518, 865, 1020, 1474, 1627, 1912, 2055 |
| MflI | RGATCY | 5 cut(s) | 71, 307, 518, 865, 1020 |
| MhlI | GDGCHC | 5 cut(s) | 222, 289, 323, 1623, 2135 |
| MlsI | TGGCCA | 1 cut(s) | 1365 |
| MluNI | TGGCCA | 1 cut(s) | 1365 |
| MlyI | GAGTC | 2 cut(s) | 917, 1788 |
| MmeI | TCCRAC | 4 cut(s) | 628, 823, 957, 1596 |
| Mox20I | TGGCCA | 1 cut(s) | 1365 |
| Mph1103I | ATGCAT | 2 cut(s) | 505, 2050 |
| MroI | TCCGGA | 1 cut(s) | 862 |
| MscI | TGGCCA | 1 cut(s) | 1365 |
| MseI | TTAA | 7 cut(s) | 257, 632, 1005, 1079, 1160, 1670, 1850 |
| MslI | CAYNNNNRTG | 1 cut(s) | 1226 |
| Msp20I | TGGCCA | 1 cut(s) | 1365 |
| MspI | CCGG | 1 cut(s) | 863 |
| MvnI | CGCG | 1 cut(s) | 168 |
| MwoI | GCNNNNNNNGC | 7 cut(s) | 421, 996, 1039, 1289, 1618, 1648, 1940 |
| NdeII | GATC | 9 cut(s) | 71, 307, 518, 865, 1020, 1474, 1627, 1912, 2055 |
| NlaIV | GGNNCC | 5 cut(s) | 309, 520, 867, 1560, 1775 |
| NmeAIII | GCCGAG | 2 cut(s) | 487, 1802 |
| NmuCI | GTSAC | 1 cut(s) | 212 |
| NsiI | ATGCAT | 2 cut(s) | 505, 2050 |
| NspI | RCATGY | 2 cut(s) | 842, 1092 |
| PaeI | GCATGC | 1 cut(s) | 1092 |
| PciI | ACATGT | 1 cut(s) | 838 |
| PfeI | GAWTC | 9 cut(s) | 493, 754, 890, 1436, 1591, 1709, 1893, 2017, 2106 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 457, 959 |
| PkrI | GCNGC | 9 cut(s) | 151, 441, 444, 828, 1044, 1428, 1653, 1750, 1985 |
| PleI | GAGTC | 2 cut(s) | 916, 1787 |
| PpsI | GAGTC | 2 cut(s) | 916, 1787 |
| PscI | ACATGT | 1 cut(s) | 838 |
| Psp124BI | GAGCTC | 2 cut(s) | 323, 1623 |
| PspFI | CCCAGC | 2 cut(s) | 312, 1987 |
| PspN4I | GGNNCC | 5 cut(s) | 309, 520, 867, 1560, 1775 |
| PstI | CTGCAG | 2 cut(s) | 447, 1601 |
| PsuI | RGATCY | 5 cut(s) | 71, 307, 518, 865, 1020 |
| RsaI | GTAC | 3 cut(s) | 964, 1171, 1510 |
| RsaNI | GTAC | 3 cut(s) | 963, 1170, 1509 |
| RseI | CAYNNNNRTG | 1 cut(s) | 1226 |
| SacI | GAGCTC | 2 cut(s) | 323, 1623 |
| SaqAI | TTAA | 7 cut(s) | 257, 632, 1005, 1079, 1160, 1670, 1850 |
| SatI | GCNGC | 9 cut(s) | 150, 440, 443, 827, 1043, 1427, 1652, 1749, 1984 |
| Sau3AI | GATC | 9 cut(s) | 71, 307, 518, 865, 1020, 1474, 1627, 1912, 2055 |
| SchI | GAGTC | 2 cut(s) | 917, 1788 |
| SduI | GDGCHC | 5 cut(s) | 222, 289, 323, 1623, 2135 |
| SfcI | CTRYAG | 5 cut(s) | 207, 443, 1393, 1413, 1597 |
| SmiI | ATTTAAAT | 1 cut(s) | 633 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 1226 |
| SmlI | CTYRAG | 1 cut(s) | 894 |
| SmoI | CTYRAG | 1 cut(s) | 894 |
| SphI | GCATGC | 1 cut(s) | 1092 |
| SsiI | CCGC | 3 cut(s) | 166, 1092, 1252 |
| SspMI | CTAG | 9 cut(s) | 678, 705, 759, 786, 1034, 1109, 1502, 1655, 1890 |
| SstI | GAGCTC | 2 cut(s) | 323, 1623 |
| StyI | CCWWGG | 1 cut(s) | 1303 |
| SwaI | ATTTAAAT | 1 cut(s) | 633 |
| TaaI | ACNGT | 2 cut(s) | 690, 1152 |
| TaiI | ACGT | 3 cut(s) | 387, 660, 1167 |
| TaqI | TCGA | 3 cut(s) | 1569, 1792, 2140 |
| TatI | WGTACW | 2 cut(s) | 1169, 1508 |
| TfiI | GAWTC | 9 cut(s) | 493, 754, 890, 1436, 1591, 1709, 1893, 2017, 2106 |
| Tru1I | TTAA | 7 cut(s) | 257, 632, 1005, 1079, 1160, 1670, 1850 |
| Tru9I | TTAA | 7 cut(s) | 257, 632, 1005, 1079, 1160, 1670, 1850 |
| TscAI | CASTG | 1 cut(s) | 196 |
| TseFI | GTSAC | 1 cut(s) | 212 |
| TseI | GCWGC | 9 cut(s) | 149, 439, 442, 826, 1042, 1426, 1651, 1748, 1983 |
| Tsp45I | GTSAC | 1 cut(s) | 212 |
| TspDTI | ATGAA | 8 cut(s) | 102, 108, 392, 1528, 1595, 1604, 1800, 1877 |
| TspRI | CASTG | 1 cut(s) | 196 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 457, 959 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 1721 |
| XapI | RAATTY | 5 cut(s) | 403, 469, 628, 1121, 1182 |
| XbaI | TCTAGA | 1 cut(s) | 1108 |
| XceI | RCATGY | 2 cut(s) | 842, 1092 |
| XcmI | CCANNNNNNNNNTGG | 3 cut(s) | 458, 1373, 2120 |
| XspI | CTAG | 9 cut(s) | 678, 705, 759, 786, 1034, 1109, 1502, 1655, 1890 |
| Zsp2I | ATGCAT | 2 cut(s) | 505, 2050 |