Pentatricopeptide repeat-containing protein
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| Species | Orthologous Gene IDs |
|---|---|
| prunus_persica | Prupe.1G571700_v2.0.a1 Prupe.1G571700_v2.0.a1 Prupe.1G571700_v2.0.a1 Prupe.1G571700_v2.0.a1 Prupe.8G043900_v2.0.a1 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 1 cut(s) | 37 |
| Acc36I | ACCTGC | 1 cut(s) | 1385 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1007 |
| AccI | GTMKAC | 1 cut(s) | 763 |
| AciI | CCGC | 3 cut(s) | 151, 884, 1140 |
| AclWI | GGATC | 6 cut(s) | 564, 577, 908, 1530, 1683, 1700 |
| AcsI | RAATTY | 2 cut(s) | 484, 1230 |
| AcuI | CTGAAG | 1 cut(s) | 1485 |
| AcyI | GRCGYC | 1 cut(s) | 34 |
| AfaI | GTAC | 6 cut(s) | 652, 894, 1012, 1223, 1558, 1661 |
| AfiI | CCNNNNNNNGG | 8 cut(s) | 87, 88, 538, 734, 788, 815, 1007, 1519 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 272, 304 |
| Alw21I | GWGCWC | 4 cut(s) | 177, 231, 1220, 2015 |
| Alw26I | GTCTC | 4 cut(s) | 110, 1206, 1760, 1828 |
| Alw44I | GTGCAC | 1 cut(s) | 1216 |
| AlwI | GGATC | 6 cut(s) | 564, 577, 908, 1530, 1683, 1700 |
| AoxI | GGCC | 4 cut(s) | 117, 145, 859, 1348 |
| ApaLI | GTGCAC | 1 cut(s) | 1216 |
| ApeKI | GCWGC | 7 cut(s) | 162, 337, 340, 1090, 1474, 1699, 1863 |
| ApoI | RAATTY | 2 cut(s) | 484, 1230 |
| AspA2I | CCTAGG | 1 cut(s) | 809 |
| AspS9I | GGNCC | 3 cut(s) | 117, 382, 860 |
| AsuHPI | GGTGA | 1 cut(s) | 1925 |
| AvaII | GGWCC | 1 cut(s) | 382 |
| AvrII | CCTAGG | 1 cut(s) | 809 |
| BaeGI | GKGCMC | 1 cut(s) | 1220 |
| BamHI | GGATCC | 1 cut(s) | 569 |
| BanII | GRGCYC | 2 cut(s) | 82, 177 |
| BauI | CACGAG | 1 cut(s) | 230 |
| Bbv12I | GWGCWC | 4 cut(s) | 177, 231, 1220, 2015 |
| BbvCI | CCTCAGC | 1 cut(s) | 1859 |
| BbvI | GCAGC | 7 cut(s) | 149, 327, 349, 1102, 1461, 1711, 1875 |
| BccI | CCATC | 5 cut(s) | 365, 471, 590, 809, 1997 |
| BceAI | ACGGC | 1 cut(s) | 234 |
| BcoDI | GTCTC | 4 cut(s) | 110, 1206, 1760, 1828 |
| BfmI | CTRYAG | 3 cut(s) | 524, 1645, 1842 |
| BfuAI | ACCTGC | 1 cut(s) | 1385 |
| BglII | AGATCT | 1 cut(s) | 1068 |
| BisI | GCNGC | 7 cut(s) | 163, 338, 341, 1091, 1475, 1700, 1864 |
| BlnI | CCTAGG | 1 cut(s) | 809 |
| BlpI | GCTNAGC | 2 cut(s) | 246, 1686 |
| BlsI | GCNGC | 7 cut(s) | 164, 339, 342, 1092, 1476, 1701, 1865 |
| Bme18I | GGWCC | 1 cut(s) | 382 |
| BmgT120I | GGNCC | 3 cut(s) | 117, 382, 860 |
| BmiI | GGNNCC | 5 cut(s) | 118, 383, 384, 571, 1608 |
| BmrI | ACTGGG | 1 cut(s) | 148 |
| BmsI | GCATC | 8 cut(s) | 697, 724, 1120, 1281, 1351, 1587, 1801, 1966 |
| BmuI | ACTGGG | 1 cut(s) | 148 |
| BpmI | CTGGAG | 1 cut(s) | 1696 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1859 |
| Bpu1102I | GCTNAGC | 2 cut(s) | 246, 1686 |
| BpuEI | CTTGAG | 2 cut(s) | 927, 951 |
| BsaAI | YACGTR | 2 cut(s) | 1221, 1784 |
| BsaHI | GRCGYC | 1 cut(s) | 34 |
| BsaI | GGTCTC | 1 cut(s) | 110 |
| BsaJI | CCNNGG | 3 cut(s) | 154, 809, 1351 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 36, 66 |
| Bsc4I | CCNNNNNNNGG | 8 cut(s) | 87, 88, 538, 734, 788, 815, 1007, 1519 |
| Bse1I | ACTGG | 3 cut(s) | 143, 198, 467 |
| Bse3DI | GCAATG | 2 cut(s) | 454, 717 |
| BseDI | CCNNGG | 3 cut(s) | 154, 809, 1351 |
| BseGI | GGATG | 3 cut(s) | 287, 463, 820 |
| BseLI | CCNNNNNNNGG | 8 cut(s) | 87, 88, 538, 734, 788, 815, 1007, 1519 |
| BseMI | GCAATG | 2 cut(s) | 454, 717 |
| BseMII | CTCAG | 3 cut(s) | 260, 1677, 1873 |
| BseNI | ACTGG | 3 cut(s) | 143, 198, 467 |
| BseRI | GAGGAG | 1 cut(s) | 1847 |
| BseSI | GKGCMC | 1 cut(s) | 1220 |
| BseXI | GCAGC | 7 cut(s) | 149, 327, 349, 1102, 1461, 1711, 1875 |
| BseYI | CCCAGC | 2 cut(s) | 387, 1867 |
| BsgI | GTGCAG | 2 cut(s) | 387, 1460 |
| BshFI | GGCC | 4 cut(s) | 119, 147, 861, 1350 |
| BsiHKAI | GWGCWC | 4 cut(s) | 177, 231, 1220, 2015 |
| BslFI | GGGAC | 2 cut(s) | 395, 1496 |
| BslI | CCNNNNNNNGG | 8 cut(s) | 87, 88, 538, 734, 788, 815, 1007, 1519 |
| BsmAI | GTCTC | 4 cut(s) | 110, 1206, 1760, 1828 |
| BsmBI | CGTCTC | 1 cut(s) | 1206 |
| BsmFI | GGGAC | 2 cut(s) | 395, 1496 |
| BsnI | GGCC | 4 cut(s) | 119, 147, 861, 1350 |
| Bso31I | GGTCTC | 1 cut(s) | 110 |
| Bsp1286I | GDGCHC | 5 cut(s) | 82, 177, 231, 1220, 2015 |
| Bsp1407I | TGTACA | 1 cut(s) | 892 |
| Bsp143I | GATC | 7 cut(s) | 569, 913, 1068, 1522, 1675, 1705, 1792 |
| Bsp1720I | GCTNAGC | 2 cut(s) | 246, 1686 |
| Bsp19I | CCATGG | 1 cut(s) | 154 |
| BspACI | CCGC | 3 cut(s) | 151, 884, 1140 |
| BspANI | GGCC | 4 cut(s) | 119, 147, 861, 1350 |
| BspCNI | CTCAG | 3 cut(s) | 259, 1678, 1872 |
| BspHI | TCATGA | 2 cut(s) | 223, 1177 |
| BspLI | GGNNCC | 5 cut(s) | 118, 383, 384, 571, 1608 |
| BspMAI | CTGCAG | 2 cut(s) | 528, 1649 |
| BspMI | ACCTGC | 1 cut(s) | 1385 |
| BspPI | GGATC | 6 cut(s) | 564, 577, 908, 1530, 1683, 1700 |
| BspTNI | GGTCTC | 1 cut(s) | 110 |
| BsrDI | GCAATG | 2 cut(s) | 454, 717 |
| BsrGI | TGTACA | 1 cut(s) | 892 |
| BsrI | ACTGG | 3 cut(s) | 143, 198, 467 |
| BssECI | CCNNGG | 3 cut(s) | 154, 809, 1351 |
| BssMI | GATC | 7 cut(s) | 569, 913, 1068, 1522, 1675, 1705, 1792 |
| BssNI | GRCGYC | 1 cut(s) | 34 |
| BssSI | CACGAG | 1 cut(s) | 230 |
| BssT1I | CCWWGG | 3 cut(s) | 154, 809, 1351 |
| Bst2BI | CACGAG | 1 cut(s) | 230 |
| Bst4CI | ACNGT | 1 cut(s) | 741 |
| Bst6I | CTCTTC | 1 cut(s) | 1020 |
| BstACI | GRCGYC | 1 cut(s) | 34 |
| BstAUI | TGTACA | 1 cut(s) | 892 |
| BstBAI | YACGTR | 2 cut(s) | 1221, 1784 |
| BstC8I | GCNNGC | 8 cut(s) | 145, 187, 884, 1134, 1138, 1216, 1338, 1821 |
| BstDEI | CTNAG | 4 cut(s) | 246, 1686, 1859, 1980 |
| BstDSI | CCRYGG | 1 cut(s) | 154 |
| BstF5I | GGATG | 3 cut(s) | 287, 463, 820 |
| BstKTI | GATC | 7 cut(s) | 572, 916, 1071, 1525, 1678, 1708, 1795 |
| BstMAI | GTCTC | 4 cut(s) | 110, 1206, 1760, 1828 |
| BstMBI | GATC | 7 cut(s) | 569, 913, 1068, 1522, 1675, 1705, 1792 |
| BstMWI | GCNNNNNNNGC | 9 cut(s) | 116, 125, 159, 502, 883, 1044, 1087, 1696, 1820 |
| BstNSI | RCATGY | 2 cut(s) | 890, 1140 |
| BstSFI | CTRYAG | 3 cut(s) | 524, 1645, 1842 |
| BstSLI | GKGCMC | 1 cut(s) | 1220 |
| BstV1I | GCAGC | 7 cut(s) | 149, 327, 349, 1102, 1461, 1711, 1875 |
| BstX2I | RGATCY | 4 cut(s) | 569, 913, 1068, 1705 |
| BstYI | RGATCY | 4 cut(s) | 569, 913, 1068, 1705 |
| BsuRI | GGCC | 4 cut(s) | 119, 147, 861, 1350 |
| BtgI | CCRYGG | 1 cut(s) | 154 |
| BtsCI | GGATG | 3 cut(s) | 287, 463, 820 |
| BtsIMutI | CAGTG | 3 cut(s) | 136, 205, 1540 |
| BveI | ACCTGC | 1 cut(s) | 1385 |
| Cac8I | GCNNGC | 8 cut(s) | 145, 187, 884, 1134, 1138, 1216, 1338, 1821 |
| CciI | TCATGA | 2 cut(s) | 223, 1177 |
| Cfr13I | GGNCC | 3 cut(s) | 117, 382, 860 |
| CseI | GACGC | 1 cut(s) | 1188 |
| Csp6I | GTAC | 6 cut(s) | 651, 893, 1011, 1222, 1557, 1660 |
| CviQI | GTAC | 6 cut(s) | 651, 893, 1011, 1222, 1557, 1660 |
| DdeI | CTNAG | 4 cut(s) | 246, 1686, 1859, 1980 |
| DpnI | GATC | 7 cut(s) | 571, 915, 1070, 1524, 1677, 1707, 1794 |
| DpnII | GATC | 7 cut(s) | 569, 913, 1068, 1522, 1675, 1705, 1792 |
| DraI | TTTAAA | 1 cut(s) | 1122 |
| Eam1104I | CTCTTC | 1 cut(s) | 1020 |
| EarI | CTCTTC | 1 cut(s) | 1020 |
| EciI | GGCGGA | 1 cut(s) | 140 |
| Ecl136II | GAGCTC | 1 cut(s) | 175 |
| Eco130I | CCWWGG | 3 cut(s) | 154, 809, 1351 |
| Eco24I | GRGCYC | 2 cut(s) | 82, 177 |
| Eco31I | GGTCTC | 1 cut(s) | 110 |
| Eco47I | GGWCC | 1 cut(s) | 382 |
| Eco53kI | GAGCTC | 1 cut(s) | 175 |
| Eco57I | CTGAAG | 1 cut(s) | 1485 |
| EcoICRI | GAGCTC | 1 cut(s) | 175 |
| EcoO109I | RGGNCCY | 2 cut(s) | 382, 860 |
| EcoT14I | CCWWGG | 3 cut(s) | 154, 809, 1351 |
| EcoT22I | ATGCAT | 2 cut(s) | 211, 717 |
| EcoT38I | GRGCYC | 2 cut(s) | 82, 177 |
| ErhI | CCWWGG | 3 cut(s) | 154, 809, 1351 |
| Esp3I | CGTCTC | 1 cut(s) | 1206 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1155, 1187 |
| FaqI | GGGAC | 2 cut(s) | 395, 1496 |
| FauI | CCCGC | 2 cut(s) | 891, 1133 |
| FauNDI | CATATG | 1 cut(s) | 205 |
| FblI | GTMKAC | 1 cut(s) | 763 |
| Fnu4HI | GCNGC | 7 cut(s) | 163, 338, 341, 1091, 1475, 1700, 1864 |
| FokI | GGATG | 3 cut(s) | 274, 450, 827 |
| FriOI | GRGCYC | 2 cut(s) | 82, 177 |
| Fsp4HI | GCNGC | 7 cut(s) | 163, 338, 341, 1091, 1475, 1700, 1864 |
| GluI | GCNGC | 7 cut(s) | 163, 338, 341, 1091, 1475, 1700, 1864 |
| GsaI | CCCAGC | 2 cut(s) | 391, 1871 |
| GsuI | CTGGAG | 1 cut(s) | 1696 |
| HaeIII | GGCC | 4 cut(s) | 119, 147, 861, 1350 |
| HgaI | GACGC | 1 cut(s) | 1188 |
| Hin1I | GRCGYC | 1 cut(s) | 34 |
| HincII | GTYRAC | 1 cut(s) | 764 |
| HindII | GTYRAC | 1 cut(s) | 764 |
| HindIII | AAGCTT | 2 cut(s) | 126, 1575 |
| HphI | GGTGA | 1 cut(s) | 1925 |
| Hpy166II | GTNNAC | 5 cut(s) | 608, 764, 845, 1218, 1654 |
| Hpy188I | TCNGA | 8 cut(s) | 77, 292, 414, 459, 584, 645, 991, 1401 |
| Hpy188III | TCNNGA | 7 cut(s) | 224, 593, 1157, 1178, 1568, 1763, 1894 |
| Hpy8I | GTNNAC | 5 cut(s) | 608, 764, 845, 1218, 1654 |
| Hpy99I | CGWCG | 2 cut(s) | 36, 39 |
| HpyAV | CCTTC | 3 cut(s) | 270, 1460, 1738 |
| HpyCH4III | ACNGT | 1 cut(s) | 741 |
| HpyCH4IV | ACGT | 4 cut(s) | 34, 1095, 1220, 1783 |
| HpyF10VI | GCNNNNNNNGC | 9 cut(s) | 116, 125, 159, 502, 883, 1044, 1087, 1696, 1820 |
| HpyF3I | CTNAG | 4 cut(s) | 246, 1686, 1859, 1980 |
| HpySE526I | ACGT | 4 cut(s) | 34, 1095, 1220, 1783 |
| Hsp92I | GRCGYC | 1 cut(s) | 34 |
| KflI | GGGWCCC | 1 cut(s) | 382 |
| Kzo9I | GATC | 7 cut(s) | 569, 913, 1068, 1522, 1675, 1705, 1792 |
| LmnI | GCTCC | 2 cut(s) | 172, 1666 |
| Lsp1109I | GCAGC | 7 cut(s) | 149, 327, 349, 1102, 1461, 1711, 1875 |
| LweI | GCATC | 8 cut(s) | 697, 724, 1120, 1281, 1351, 1587, 1801, 1966 |
| MaeII | ACGT | 4 cut(s) | 34, 1095, 1220, 1783 |
| MaeIII | GTNAC | 5 cut(s) | 416, 519, 1754, 1779, 1784 |
| MalI | GATC | 7 cut(s) | 571, 915, 1070, 1524, 1677, 1707, 1794 |
| MboI | GATC | 7 cut(s) | 569, 913, 1068, 1522, 1675, 1705, 1792 |
| MboII | GAAGA | 8 cut(s) | 123, 1007, 1172, 1370, 1466, 1820, 1892, 1945 |
| MflI | RGATCY | 4 cut(s) | 569, 913, 1068, 1705 |
| MhlI | GDGCHC | 5 cut(s) | 82, 177, 231, 1220, 2015 |
| MlyI | GAGTC | 1 cut(s) | 965 |
| MmeI | TCCRAC | 2 cut(s) | 85, 1005 |
| Mph1103I | ATGCAT | 2 cut(s) | 211, 717 |
| MseI | TTAA | 8 cut(s) | 266, 432, 1121, 1127, 1377, 1386, 1718, 1730 |
| MslI | CAYNNNNRTG | 2 cut(s) | 1098, 1274 |
| MspA1I | CMGCKG | 1 cut(s) | 340 |
| MwoI | GCNNNNNNNGC | 9 cut(s) | 116, 125, 159, 502, 883, 1044, 1087, 1696, 1820 |
| NcoI | CCATGG | 1 cut(s) | 154 |
| NdeI | CATATG | 1 cut(s) | 205 |
| NdeII | GATC | 7 cut(s) | 569, 913, 1068, 1522, 1675, 1705, 1792 |
| NlaIV | GGNNCC | 5 cut(s) | 118, 383, 384, 571, 1608 |
| NmeAIII | GCCGAG | 1 cut(s) | 42 |
| NmuCI | GTSAC | 1 cut(s) | 1784 |
| NsiI | ATGCAT | 2 cut(s) | 211, 717 |
| NspI | RCATGY | 2 cut(s) | 890, 1140 |
| PaeI | GCATGC | 1 cut(s) | 1140 |
| PagI | TCATGA | 2 cut(s) | 223, 1177 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1007 |
| PkrI | GCNGC | 7 cut(s) | 164, 339, 342, 1092, 1476, 1701, 1865 |
| PleI | GAGTC | 1 cut(s) | 964 |
| PpsI | GAGTC | 1 cut(s) | 964 |
| Ppu21I | YACGTR | 2 cut(s) | 1221, 1784 |
| PpuMI | RGGWCCY | 1 cut(s) | 382 |
| Psp124BI | GAGCTC | 1 cut(s) | 177 |
| Psp5II | RGGWCCY | 1 cut(s) | 382 |
| PspFI | CCCAGC | 2 cut(s) | 387, 1867 |
| PspN4I | GGNNCC | 5 cut(s) | 118, 383, 384, 571, 1608 |
| PspPI | GGNCC | 3 cut(s) | 117, 382, 860 |
| PspPPI | RGGWCCY | 1 cut(s) | 382 |
| PstI | CTGCAG | 2 cut(s) | 528, 1649 |
| PsuI | RGATCY | 4 cut(s) | 569, 913, 1068, 1705 |
| PvuII | CAGCTG | 1 cut(s) | 340 |
| RsaI | GTAC | 6 cut(s) | 652, 894, 1012, 1223, 1558, 1661 |
| RsaNI | GTAC | 6 cut(s) | 651, 893, 1011, 1222, 1557, 1660 |
| RseI | CAYNNNNRTG | 2 cut(s) | 1098, 1274 |
| SacI | GAGCTC | 1 cut(s) | 177 |
| SalI | GTCGAC | 1 cut(s) | 762 |
| SaqAI | TTAA | 8 cut(s) | 266, 432, 1121, 1127, 1377, 1386, 1718, 1730 |
| SatI | GCNGC | 7 cut(s) | 163, 338, 341, 1091, 1475, 1700, 1864 |
| Sau3AI | GATC | 7 cut(s) | 569, 913, 1068, 1522, 1675, 1705, 1792 |
| Sau96I | GGNCC | 3 cut(s) | 117, 382, 860 |
| SchI | GAGTC | 1 cut(s) | 965 |
| SduI | GDGCHC | 5 cut(s) | 82, 177, 231, 1220, 2015 |
| SfaNI | GCATC | 8 cut(s) | 697, 724, 1120, 1281, 1351, 1587, 1801, 1966 |
| SfcI | CTRYAG | 3 cut(s) | 524, 1645, 1842 |
| SinI | GGWCC | 1 cut(s) | 382 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 1098, 1274 |
| SmlI | CTYRAG | 2 cut(s) | 942, 966 |
| SmoI | CTYRAG | 2 cut(s) | 942, 966 |
| SphI | GCATGC | 1 cut(s) | 1140 |
| SsiI | CCGC | 3 cut(s) | 151, 884, 1140 |
| SstI | GAGCTC | 1 cut(s) | 177 |
| StyI | CCWWGG | 3 cut(s) | 154, 809, 1351 |
| TaaI | ACNGT | 1 cut(s) | 741 |
| TaiI | ACGT | 4 cut(s) | 37, 1098, 1223, 1786 |
| TaqI | TCGA | 3 cut(s) | 41, 763, 1617 |
| TatI | WGTACW | 1 cut(s) | 892 |
| Tru1I | TTAA | 8 cut(s) | 266, 432, 1121, 1127, 1377, 1386, 1718, 1730 |
| Tru9I | TTAA | 8 cut(s) | 266, 432, 1121, 1127, 1377, 1386, 1718, 1730 |
| TscAI | CASTG | 3 cut(s) | 143, 205, 1540 |
| TseFI | GTSAC | 1 cut(s) | 1784 |
| TseI | GCWGC | 7 cut(s) | 162, 337, 340, 1090, 1474, 1699, 1863 |
| Tsp45I | GTSAC | 1 cut(s) | 1784 |
| TspDTI | ATGAA | 8 cut(s) | 1088, 1166, 1194, 1264, 1576, 1652, 1757, 1866 |
| TspRI | CASTG | 3 cut(s) | 143, 205, 1540 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1007 |
| VneI | GTGCAC | 1 cut(s) | 1216 |
| VpaK11BI | GGWCC | 1 cut(s) | 382 |
| XapI | RAATTY | 2 cut(s) | 484, 1230 |
| XbaI | TCTAGA | 1 cut(s) | 1156 |
| XceI | RCATGY | 2 cut(s) | 890, 1140 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 1421, 2000 |
| XmaJI | CCTAGG | 1 cut(s) | 809 |
| XmiI | GTMKAC | 1 cut(s) | 763 |
| ZraI | GACGTC | 1 cut(s) | 35 |
| Zsp2I | ATGCAT | 2 cut(s) | 211, 717 |