Prupe.1G577800_v2.0.a1
ERF Family

Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
OG0024392
Physical Location & Seq
Reverse (-)
47033610 .. 47035164
1555 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G577800.1

Sequence Viewer

Length: 624 bp
ATGAGGAATGCAAGAGAGTTTGAGGATACAGAAAGGTGGATTTCATCTTCAAAGCTGCCTCAGCTGTGTTTAAATCACGTGTCATTTGTTTGCAAGTCAGTGAGCAAGTCTGTGAGGTTTTATGAGCAAGTCTTAGGTTTTGTGCTCATTAAACGCCCTTCTTCCTTCAAATTTGAGGGAGCTTGGTTGTTCAACTATGGAATTGGTATTCATCTGCTAGAGTCAGACAAAAATATCCCAGAAAAGAAAGGCAAAATCAACCCAAAGGACAACCACATTTCATTCCAGTGCTCAGATATGGGGATGGTTATGCAGAAGCTGGAGGAGATGAAGATAGAGTATGTGACAGCCAAGGTGGAAGAAGGTGGTGTTATTGTGGACCAGCTCTTCTTTCATGATCCAGACGGCTACATGGTTGAAATTTGCAATTGTCAAAATCTCCCTGTTCTTCCAATCTCCTCATGCCCTATCAAGCTTATTACCAACACCAACGCAAACCATACATCATCATCATCATCATCATCTTTTTATGGGGAACAGAGACAAGAGATGAGCTGCTCTGGAGAAGCTGCGACGCTGATGATGGAAGGCTTGGTGATGGACGTCATGAACATTTCCATGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Glyoxalase

Protein Analysis

208

Amino Acids

23.4

Weight (kDa)

5.57

Isoelectric Point (pI)

48.79

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0024392)

Species Orthologous Gene IDs
malus_domestica MD08G1241000.v1.1
prunus_persica Prupe.1G577800_v2.0.a1
pyrus_communis pycom08g20890

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 606
AclWI GGATC 1 cut(s) 392
AcsI RAATTY 2 cut(s) 170, 420
AcvI CACGTG 1 cut(s) 79
AcyI GRCGYC 1 cut(s) 603
AflIII ACRYGT 1 cut(s) 78
AgsI TTSAA 4 cut(s) 51, 169, 193, 419
AluBI AGCT 8 cut(s) 55, 64, 182, 319, 385, 475, 555, 569
AluI AGCT 8 cut(s) 55, 64, 182, 319, 385, 475, 555, 569
Alw21I GWGCWC 2 cut(s) 147, 293
Alw26I GTCTC 1 cut(s) 535
AlwI GGATC 1 cut(s) 392
AlwNI CAGNNNCTG 1 cut(s) 319
ApeKI GCWGC 3 cut(s) 55, 555, 569
ApoI RAATTY 2 cut(s) 170, 420
AspS9I GGNCC 1 cut(s) 379
AsuHPI GGTGA 1 cut(s) 607
AvaII GGWCC 1 cut(s) 379
BbrPI CACGTG 1 cut(s) 79
Bbv12I GWGCWC 2 cut(s) 147, 293
BbvCI CCTCAGC 1 cut(s) 60
BbvI GCAGC 3 cut(s) 42, 542, 556
BccI CCATC 3 cut(s) 298, 577, 592
BceAI ACGGC 1 cut(s) 421
BciVI GTATCC 1 cut(s) 19
BcoDI GTCTC 1 cut(s) 535
BfaI CTAG 1 cut(s) 218
BfuI GTATCC 1 cut(s) 19
BisI GCNGC 3 cut(s) 56, 556, 570
BlsI GCNGC 3 cut(s) 57, 557, 571
Bme18I GGWCC 1 cut(s) 379
BmgT120I GGNCC 1 cut(s) 379
BpmI CTGGAG 2 cut(s) 341, 582
Bpu10I CCTNAGC 1 cut(s) 60
BsaAI YACGTR 1 cut(s) 79
BsaHI GRCGYC 1 cut(s) 603
BsaJI CCNNGG 1 cut(s) 351
Bse1I ACTGG 1 cut(s) 286
BseDI CCNNGG 1 cut(s) 351
BseGI GGATG 1 cut(s) 309
BseMII CTCAG 2 cut(s) 74, 306
BseNI ACTGG 1 cut(s) 286
BseRI GAGGAG 2 cut(s) 338, 448
BseXI GCAGC 3 cut(s) 42, 542, 556
BsiHKAI GWGCWC 2 cut(s) 147, 293
BsmAI GTCTC 1 cut(s) 535
BsmI GAATGC 1 cut(s) 13
Bsp1286I GDGCHC 2 cut(s) 147, 293
Bsp143I GATC 1 cut(s) 397
BspCNI CTCAG 2 cut(s) 73, 305
BspHI TCATGA 2 cut(s) 394, 606
BspPI GGATC 1 cut(s) 392
BspQI GCTCTTC 1 cut(s) 392
BsrI ACTGG 1 cut(s) 286
BssECI CCNNGG 1 cut(s) 351
BssMI GATC 1 cut(s) 397
BssNI GRCGYC 1 cut(s) 603
BssT1I CCWWGG 1 cut(s) 351
Bst6I CTCTTC 1 cut(s) 392
BstACI GRCGYC 1 cut(s) 603
BstBAI YACGTR 1 cut(s) 79
BstDEI CTNAG 3 cut(s) 60, 133, 292
BstF5I GGATG 1 cut(s) 309
BstKTI GATC 1 cut(s) 400
BstMAI GTCTC 1 cut(s) 535
BstMBI GATC 1 cut(s) 397
BstMWI GCNNNNNNNGC 1 cut(s) 61
BstV1I GCAGC 3 cut(s) 42, 542, 556
BsuI GTATCC 1 cut(s) 19
BtsCI GGATG 1 cut(s) 309
BtsIMutI CAGTG 2 cut(s) 105, 293
CaiI CAGNNNCTG 1 cut(s) 319
CciI TCATGA 2 cut(s) 394, 606
Cfr13I GGNCC 1 cut(s) 379
CseI GACGC 1 cut(s) 583
CviAII CATG 5 cut(s) 395, 412, 462, 607, 619
DdeI CTNAG 3 cut(s) 60, 133, 292
DpnI GATC 1 cut(s) 399
DpnII GATC 1 cut(s) 397
DraI TTTAAA 1 cut(s) 72
Eam1104I CTCTTC 1 cut(s) 392
EarI CTCTTC 1 cut(s) 392
Eco130I CCWWGG 1 cut(s) 351
Eco47I GGWCC 1 cut(s) 379
Eco72I CACGTG 1 cut(s) 79
EcoT14I CCWWGG 1 cut(s) 351
ErhI CCWWGG 1 cut(s) 351
FaeI CATG 5 cut(s) 398, 415, 465, 610, 622
FatI CATG 5 cut(s) 394, 411, 461, 606, 618
Fnu4HI GCNGC 3 cut(s) 56, 556, 570
FokI GGATG 1 cut(s) 316
Fsp4HI GCNGC 3 cut(s) 56, 556, 570
FspBI CTAG 1 cut(s) 218
GluI GCNGC 3 cut(s) 56, 556, 570
GsuI CTGGAG 2 cut(s) 341, 582
HgaI GACGC 1 cut(s) 583
Hin1I GRCGYC 1 cut(s) 603
Hin1II CATG 5 cut(s) 398, 415, 465, 610, 622
HindIII AAGCTT 1 cut(s) 473
HinfI GANTC 1 cut(s) 221
HphI GGTGA 1 cut(s) 607
Hpy166II GTNNAC 1 cut(s) 379
Hpy188I TCNGA 2 cut(s) 226, 295
Hpy188III TCNNGA 4 cut(s) 395, 401, 561, 607
Hpy8I GTNNAC 1 cut(s) 379
Hpy99I CGWCG 1 cut(s) 577
HpyAV CCTTC 4 cut(s) 168, 175, 356, 581
HpyCH4IV ACGT 2 cut(s) 78, 603
HpyCH4V TGCA 4 cut(s) 11, 93, 313, 426
HpyF10VI GCNNNNNNNGC 1 cut(s) 61
HpyF3I CTNAG 3 cut(s) 60, 133, 292
HpySE526I ACGT 2 cut(s) 78, 603
Hsp92I GRCGYC 1 cut(s) 603
Hsp92II CATG 5 cut(s) 398, 415, 465, 610, 622
Kzo9I GATC 1 cut(s) 397
LguI GCTCTTC 1 cut(s) 392
LmnI GCTCC 1 cut(s) 179
LpnPI CCDG 7 cut(s) 252, 299, 305, 395, 414, 456, 546
Lsp1109I GCAGC 3 cut(s) 42, 542, 556
MaeI CTAG 1 cut(s) 218
MaeII ACGT 2 cut(s) 78, 603
MaeIII GTNAC 1 cut(s) 343
MalI GATC 1 cut(s) 399
MboI GATC 1 cut(s) 397
MboII GAAGA 6 cut(s) 39, 153, 343, 371, 379, 440
MfeI CAATTG 1 cut(s) 427
MhlI GDGCHC 2 cut(s) 147, 293
MluCI AATT 4 cut(s) 170, 201, 420, 427
MlyI GAGTC 1 cut(s) 230
MnlI CCTC 6 cut(s) 16, 69, 108, 169, 316, 469
MseI TTAA 2 cut(s) 71, 150
MslI CAYNNNNRTG 2 cut(s) 286, 617
MspA1I CMGCKG 1 cut(s) 64
MunI CAATTG 1 cut(s) 427
Mva1269I GAATGC 1 cut(s) 13
MwoI GCNNNNNNNGC 1 cut(s) 61
NdeII GATC 1 cut(s) 397
NlaIII CATG 5 cut(s) 398, 415, 465, 610, 622
NmuCI GTSAC 1 cut(s) 343
PagI TCATGA 2 cut(s) 394, 606
PciSI GCTCTTC 1 cut(s) 392
PctI GAATGC 1 cut(s) 13
PkrI GCNGC 3 cut(s) 57, 557, 571
PleI GAGTC 1 cut(s) 229
PmaCI CACGTG 1 cut(s) 79
PmlI CACGTG 1 cut(s) 79
PpsI GAGTC 1 cut(s) 229
Ppu21I YACGTR 1 cut(s) 79
PspCI CACGTG 1 cut(s) 79
PspPI GGNCC 1 cut(s) 379
PstNI CAGNNNCTG 1 cut(s) 319
PvuII CAGCTG 1 cut(s) 64
RseI CAYNNNNRTG 2 cut(s) 286, 617
SapI GCTCTTC 1 cut(s) 392
SaqAI TTAA 2 cut(s) 71, 150
SatI GCNGC 3 cut(s) 56, 556, 570
Sau3AI GATC 1 cut(s) 397
Sau96I GGNCC 1 cut(s) 379
SchI GAGTC 1 cut(s) 230
SduI GDGCHC 2 cut(s) 147, 293
SinI GGWCC 1 cut(s) 379
SmiMI CAYNNNNRTG 2 cut(s) 286, 617
Sse9I AATT 4 cut(s) 170, 201, 420, 427
SspMI CTAG 1 cut(s) 218
StyI CCWWGG 1 cut(s) 351
TaiI ACGT 2 cut(s) 81, 606
TasI AATT 4 cut(s) 170, 201, 420, 427
Tru1I TTAA 2 cut(s) 71, 150
Tru9I TTAA 2 cut(s) 71, 150
TscAI CASTG 2 cut(s) 105, 293
TseFI GTSAC 1 cut(s) 343
TseI GCWGC 3 cut(s) 55, 555, 569
Tsp45I GTSAC 1 cut(s) 343
TspDTI ATGAA 6 cut(s) 33, 200, 270, 344, 383, 623
TspRI CASTG 2 cut(s) 105, 293
VpaK11BI GGWCC 1 cut(s) 379
XapI RAATTY 2 cut(s) 170, 420
XspI CTAG 1 cut(s) 218
ZraI GACGTC 1 cut(s) 604
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.