Prupe.2G085500_v2.0.a1

Acetolactate synthase small subunit

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp02
Physical Location & Seq
Reverse (-)
13540437 .. 13541780
1344 bp
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UTR
Exon/CDS
Intron
Prupe.2G085500.1

Sequence Viewer

Length: 177 bp
ATGCTAAGTTTAGCTGTTGGCCATGCAGAAGTTGAGGGGCTCTCTCGCATTACTACTGTTGTTCCTGGTACAGACGAATCAATTAGCAAGTTGGTGCAGCAGCTTTATAAGCTTGCCGATATTCATGATTTGAGAATGTTTAACTATTACAAAGAATGCATTTGTTTAATATGTTAA

Protein Analysis

59

Amino Acids

6.53

Weight (kDa)

5.45

Isoelectric Point (pI)

34.26

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0028942)

Species Orthologous Gene IDs
prunus_persica Prupe.2G085500_v2.0.a1 Prupe.5G132200_v2.0.a1

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 108
AcoI YGGCCR 1 cut(s) 19
AfaI GTAC 1 cut(s) 70
AjnI CCWGG 1 cut(s) 64
AluBI AGCT 3 cut(s) 14, 103, 112
AluI AGCT 3 cut(s) 14, 103, 112
AoxI GGCC 1 cut(s) 19
ApeKI GCWGC 2 cut(s) 97, 100
BalI TGGCCA 1 cut(s) 21
BanII GRGCYC 1 cut(s) 42
BbvI GCAGC 2 cut(s) 109, 112
BciT130I CCWGG 1 cut(s) 66
BisI GCNGC 2 cut(s) 98, 101
BlsI GCNGC 2 cut(s) 99, 102
Bme1390I CCNGG 1 cut(s) 66
BmrFI CCNGG 1 cut(s) 66
BplI GAGNNNNNCTC 2 cut(s) 26, 58
BseBI CCWGG 1 cut(s) 66
BseXI GCAGC 2 cut(s) 109, 112
BsgI GTGCAG 1 cut(s) 116
BshFI GGCC 1 cut(s) 21
BsmI GAATGC 1 cut(s) 161
BsnI GGCC 1 cut(s) 21
Bsp1286I GDGCHC 1 cut(s) 42
BspANI GGCC 1 cut(s) 21
BspHI TCATGA 1 cut(s) 124
Bst2UI CCWGG 1 cut(s) 66
Bst4CI ACNGT 1 cut(s) 58
BstC8I GCNNGC 1 cut(s) 114
BstDEI CTNAG 1 cut(s) 5
BstMWI GCNNNNNNNGC 1 cut(s) 109
BstNI CCWGG 1 cut(s) 66
BstSCI CCNGG 1 cut(s) 64
BstV1I GCAGC 2 cut(s) 109, 112
BsuRI GGCC 1 cut(s) 21
Cac8I GCNNGC 1 cut(s) 114
CciI TCATGA 1 cut(s) 124
Csp6I GTAC 1 cut(s) 69
CviAII CATG 2 cut(s) 23, 125
CviJI RGCY 5 cut(s) 14, 21, 40, 103, 112
CviKI_1 RGCY 5 cut(s) 14, 21, 40, 103, 112
CviQI GTAC 1 cut(s) 69
DdeI CTNAG 1 cut(s) 5
EaeI YGGCCR 1 cut(s) 19
Eco24I GRGCYC 1 cut(s) 42
EcoRII CCWGG 1 cut(s) 64
EcoT22I ATGCAT 1 cut(s) 161
EcoT38I GRGCYC 1 cut(s) 42
FaeI CATG 2 cut(s) 26, 128
FaiI YATR 4 cut(s) 24, 108, 126, 172
FatI CATG 2 cut(s) 22, 124
Fnu4HI GCNGC 2 cut(s) 98, 101
FriOI GRGCYC 1 cut(s) 42
Fsp4HI GCNGC 2 cut(s) 98, 101
FspEI CC 9 cut(s) 3, 20, 21, 22, 35, 51, 77, 78, 130
GluI GCNGC 2 cut(s) 98, 101
HaeIII GGCC 1 cut(s) 21
Hin1II CATG 2 cut(s) 26, 128
HindIII AAGCTT 1 cut(s) 110
HinfI GANTC 1 cut(s) 77
Hpy188III TCNNGA 1 cut(s) 125
HpyCH4III ACNGT 1 cut(s) 58
HpyCH4V TGCA 3 cut(s) 26, 97, 159
HpyF10VI GCNNNNNNNGC 1 cut(s) 109
HpyF3I CTNAG 1 cut(s) 5
Hsp92II CATG 2 cut(s) 26, 128
LpnPI CCDG 2 cut(s) 51, 78
Lsp1109I GCAGC 2 cut(s) 109, 112
MhlI GDGCHC 1 cut(s) 42
MlsI TGGCCA 1 cut(s) 21
MluCI AATT 1 cut(s) 81
MluNI TGGCCA 1 cut(s) 21
MnlI CCTC 1 cut(s) 28
Mox20I TGGCCA 1 cut(s) 21
Mph1103I ATGCAT 1 cut(s) 161
MscI TGGCCA 1 cut(s) 21
MseI TTAA 3 cut(s) 141, 167, 175
Msp20I TGGCCA 1 cut(s) 21
MspR9I CCNGG 1 cut(s) 66
Mva1269I GAATGC 1 cut(s) 161
MvaI CCWGG 1 cut(s) 66
MwoI GCNNNNNNNGC 1 cut(s) 109
NlaIII CATG 2 cut(s) 26, 128
NsiI ATGCAT 1 cut(s) 161
PagI TCATGA 1 cut(s) 124
PctI GAATGC 1 cut(s) 161
PfeI GAWTC 1 cut(s) 77
PkrI GCNGC 2 cut(s) 99, 102
PsiI TTATAA 1 cut(s) 108
Psp6I CCWGG 1 cut(s) 64
PspGI CCWGG 1 cut(s) 64
RsaI GTAC 1 cut(s) 70
RsaNI GTAC 1 cut(s) 69
SaqAI TTAA 3 cut(s) 141, 167, 175
SatI GCNGC 2 cut(s) 98, 101
ScrFI CCNGG 1 cut(s) 66
SduI GDGCHC 1 cut(s) 42
SetI ASST 3 cut(s) 16, 105, 114
SgeI CNNG 7 cut(s) 35, 57, 77, 78, 100, 125, 137
Sse9I AATT 1 cut(s) 81
StyD4I CCNGG 1 cut(s) 64
TaaI ACNGT 1 cut(s) 58
TasI AATT 1 cut(s) 81
TfiI GAWTC 1 cut(s) 77
Tru1I TTAA 3 cut(s) 141, 167, 175
Tru9I TTAA 3 cut(s) 141, 167, 175
TseI GCWGC 2 cut(s) 97, 100
TspDTI ATGAA 1 cut(s) 113
Zsp2I ATGCAT 1 cut(s) 161
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.