Prupe.5G132200_v2.0.a1

Acetolactate synthase small subunit

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp05
Physical Location & Seq
Reverse (-)
12705177 .. 12706474
1298 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.5G132200.1

Sequence Viewer

Length: 189 bp
ATGGTCATCATCAGCTGGAGTTTAGCTGTTGGCCATGCAGAAGTTGAGGGGCTCTCTCGCATTACTACTGTTGTTCCTGGTACAGACGAATCAATTAGCAAGTTGGTGCAGCAACTTTATAAGCTTGCCGATATTCATGATGTGAGAATGTTTAACTATTACAAAGAATGCATTTGTTTAATATGTTAA

Protein Analysis

63

Amino Acids

7.0

Weight (kDa)

5.45

Isoelectric Point (pI)

29.59

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0028942)

Species Orthologous Gene IDs
prunus_persica Prupe.2G085500_v2.0.a1 Prupe.5G132200_v2.0.a1

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 120
AcoI YGGCCR 1 cut(s) 31
AfaI GTAC 1 cut(s) 82
AjnI CCWGG 1 cut(s) 76
AluBI AGCT 3 cut(s) 15, 26, 124
AluI AGCT 3 cut(s) 15, 26, 124
AoxI GGCC 1 cut(s) 31
ApeKI GCWGC 1 cut(s) 109
BalI TGGCCA 1 cut(s) 33
BanII GRGCYC 1 cut(s) 54
BbvI GCAGC 1 cut(s) 121
BciT130I CCWGG 1 cut(s) 78
BisI GCNGC 1 cut(s) 110
BlsI GCNGC 1 cut(s) 111
Bme1390I CCNGG 1 cut(s) 78
BmrFI CCNGG 1 cut(s) 78
BplI GAGNNNNNCTC 2 cut(s) 38, 70
BpmI CTGGAG 1 cut(s) 37
BseBI CCWGG 1 cut(s) 78
BseXI GCAGC 1 cut(s) 121
BsgI GTGCAG 1 cut(s) 128
BshFI GGCC 1 cut(s) 33
BsmI GAATGC 1 cut(s) 173
BsnI GGCC 1 cut(s) 33
Bsp1286I GDGCHC 1 cut(s) 54
BspANI GGCC 1 cut(s) 33
BspHI TCATGA 1 cut(s) 136
Bst2UI CCWGG 1 cut(s) 78
Bst4CI ACNGT 1 cut(s) 70
BstC8I GCNNGC 1 cut(s) 126
BstNI CCWGG 1 cut(s) 78
BstSCI CCNGG 1 cut(s) 76
BstV1I GCAGC 1 cut(s) 121
BsuRI GGCC 1 cut(s) 33
Cac8I GCNNGC 1 cut(s) 126
CciI TCATGA 1 cut(s) 136
Csp6I GTAC 1 cut(s) 81
CviAII CATG 2 cut(s) 35, 137
CviJI RGCY 5 cut(s) 15, 26, 33, 52, 124
CviKI_1 RGCY 5 cut(s) 15, 26, 33, 52, 124
CviQI GTAC 1 cut(s) 81
EaeI YGGCCR 1 cut(s) 31
Eco24I GRGCYC 1 cut(s) 54
EcoRII CCWGG 1 cut(s) 76
EcoT22I ATGCAT 1 cut(s) 173
EcoT38I GRGCYC 1 cut(s) 54
FaeI CATG 2 cut(s) 38, 140
FaiI YATR 4 cut(s) 36, 120, 138, 184
FatI CATG 2 cut(s) 34, 136
Fnu4HI GCNGC 1 cut(s) 110
FriOI GRGCYC 1 cut(s) 54
Fsp4HI GCNGC 1 cut(s) 110
FspEI CC 9 cut(s) 15, 32, 33, 34, 47, 63, 89, 90, 142
GluI GCNGC 1 cut(s) 110
GsuI CTGGAG 1 cut(s) 37
HaeIII GGCC 1 cut(s) 33
Hin1II CATG 2 cut(s) 38, 140
HindIII AAGCTT 1 cut(s) 122
HinfI GANTC 1 cut(s) 89
Hpy188III TCNNGA 1 cut(s) 137
HpyCH4III ACNGT 1 cut(s) 70
HpyCH4V TGCA 3 cut(s) 38, 109, 171
Hsp92II CATG 2 cut(s) 38, 140
LpnPI CCDG 2 cut(s) 63, 90
Lsp1109I GCAGC 1 cut(s) 121
MhlI GDGCHC 1 cut(s) 54
MlsI TGGCCA 1 cut(s) 33
MluCI AATT 1 cut(s) 93
MluNI TGGCCA 1 cut(s) 33
MnlI CCTC 1 cut(s) 40
Mox20I TGGCCA 1 cut(s) 33
Mph1103I ATGCAT 1 cut(s) 173
MscI TGGCCA 1 cut(s) 33
MseI TTAA 3 cut(s) 153, 179, 187
Msp20I TGGCCA 1 cut(s) 33
MspA1I CMGCKG 1 cut(s) 15
MspR9I CCNGG 1 cut(s) 78
Mva1269I GAATGC 1 cut(s) 173
MvaI CCWGG 1 cut(s) 78
NlaIII CATG 2 cut(s) 38, 140
NsiI ATGCAT 1 cut(s) 173
PagI TCATGA 1 cut(s) 136
PctI GAATGC 1 cut(s) 173
PfeI GAWTC 1 cut(s) 89
PkrI GCNGC 1 cut(s) 111
PsiI TTATAA 1 cut(s) 120
Psp6I CCWGG 1 cut(s) 76
PspGI CCWGG 1 cut(s) 76
PvuII CAGCTG 1 cut(s) 15
RsaI GTAC 1 cut(s) 82
RsaNI GTAC 1 cut(s) 81
SaqAI TTAA 3 cut(s) 153, 179, 187
SatI GCNGC 1 cut(s) 110
ScrFI CCNGG 1 cut(s) 78
SduI GDGCHC 1 cut(s) 54
SetI ASST 3 cut(s) 17, 28, 126
SgeI CNNG 8 cut(s) 28, 47, 69, 89, 90, 112, 137, 149
Sse9I AATT 1 cut(s) 93
StyD4I CCNGG 1 cut(s) 76
TaaI ACNGT 1 cut(s) 70
TasI AATT 1 cut(s) 93
TfiI GAWTC 1 cut(s) 89
Tru1I TTAA 3 cut(s) 153, 179, 187
Tru9I TTAA 3 cut(s) 153, 179, 187
TseI GCWGC 1 cut(s) 109
TspDTI ATGAA 1 cut(s) 125
Zsp2I ATGCAT 1 cut(s) 173
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.