Prupe.2G122800_v2.0.a1

Cyclin-dependent kinase

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp02
Physical Location & Seq
Forward (+)
17935785 .. 17936690
906 bp
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UTR
Exon/CDS
Intron
Prupe.2G122800.1

Sequence Viewer

Length: 261 bp
ATGGGTCTTTTTACAGTTGTTTCTATGTTTGTCCTTCGTGTTCTCTCTTGGTTTCTACTAAGGTATGACTTACAGTTTGTATGGGTATCAAAAGACTATGATTTTGCTCATAGAATGCTTCTTTTGACAATTGGGATGTTCTGTGGTCCTCTCCTGTGGGTTTACTATTTGGGGTTTCTATGGTTCTCTCATGTGGGTCTACTGTGTTGGTCTCTAATTGCGGTTCTCGTCGGAGGTTTTTGTGTTAGGTTTTGTTTTTGA

Protein Analysis

87

Amino Acids

10.18

Weight (kDa)

8.46

Isoelectric Point (pI)

25.47

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0028953)

Species Orthologous Gene IDs
prunus_persica Prupe.1G003800_v2.0.a1 Prupe.2G122800_v2.0.a1

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 199
AciI CCGC 1 cut(s) 221
Alw26I GTCTC 1 cut(s) 216
ArsI GACNNNNNNTTYG 4 cut(s) 59, 86, 91, 118
AspS9I GGNCC 1 cut(s) 146
AvaII GGWCC 1 cut(s) 146
BcoDI GTCTC 1 cut(s) 216
Bme18I GGWCC 1 cut(s) 146
BmgT120I GGNCC 1 cut(s) 146
BsaI GGTCTC 1 cut(s) 216
BseGI GGATG 1 cut(s) 141
BsmAI GTCTC 1 cut(s) 216
BsmI GAATGC 1 cut(s) 120
Bso31I GGTCTC 1 cut(s) 216
BspACI CCGC 1 cut(s) 221
BspTNI GGTCTC 1 cut(s) 216
Bst4CI ACNGT 3 cut(s) 16, 75, 204
BstDEI CTNAG 1 cut(s) 59
BstF5I GGATG 1 cut(s) 141
BstMAI GTCTC 1 cut(s) 216
BtsCI GGATG 1 cut(s) 141
Cfr13I GGNCC 1 cut(s) 146
CviAII CATG 1 cut(s) 191
DdeI CTNAG 1 cut(s) 59
Eco31I GGTCTC 1 cut(s) 216
Eco47I GGWCC 1 cut(s) 146
FaeI CATG 1 cut(s) 194
FaiI YATR 7 cut(s) 26, 66, 82, 99, 111, 181, 192
FatI CATG 1 cut(s) 190
FblI GTMKAC 1 cut(s) 199
FokI GGATG 1 cut(s) 148
Hin1II CATG 1 cut(s) 194
Hpy166II GTNNAC 2 cut(s) 163, 200
Hpy188I TCNGA 1 cut(s) 233
Hpy8I GTNNAC 2 cut(s) 163, 200
Hpy99I CGWCG 1 cut(s) 233
HpyAV CCTTC 1 cut(s) 44
HpyCH4III ACNGT 3 cut(s) 16, 75, 204
HpyF3I CTNAG 1 cut(s) 59
Hsp92II CATG 1 cut(s) 194
LpnPI CCDG 1 cut(s) 167
MfeI CAATTG 1 cut(s) 129
MluCI AATT 2 cut(s) 129, 216
MmeI TCCRAC 1 cut(s) 211
MnlI CCTC 2 cut(s) 159, 227
MunI CAATTG 1 cut(s) 129
Mva1269I GAATGC 1 cut(s) 120
NlaIII CATG 1 cut(s) 194
PctI GAATGC 1 cut(s) 120
PspPI GGNCC 1 cut(s) 146
Sau96I GGNCC 1 cut(s) 146
SetI ASST 3 cut(s) 65, 238, 251
SgeI CNNG 5 cut(s) 50, 60, 166, 203, 239
SinI GGWCC 1 cut(s) 146
Sse9I AATT 2 cut(s) 129, 216
SsiI CCGC 1 cut(s) 221
TaaI ACNGT 3 cut(s) 16, 75, 204
TasI AATT 2 cut(s) 129, 216
VpaK11BI GGWCC 1 cut(s) 146
XmiI GTMKAC 1 cut(s) 199
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.