Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp04

Orthogroup ID

OG0024545

Physical Location & Seq

Genomic Coordinates Forward (+)

5111527 .. 5112295

Gene Structure 769 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.4G100200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 504 bp

ATGACTGTTTATGCTTCGATGGTACGCCATAAGATGAACCAACCTGGTAAATCTCTAGGGGTGATTGGCCTTGGTGGCCTAGGTCACGTGGCAGTGAAGTTTGGCAAGGCATTTGGTTTGAATGTAACAATTTTCAGCACTAGCATATCCAAGAAAGAGGAAGCTTTAAGTCAGCTGGATGCAGATAACTTTGTGGTCTCATCTGACAGAAATCGGATCAAGGCCCTGGTGAAGTCAGTAGACTTTATAATTGATGTAGCATCTGGTGATCACCCTTTTGATCCATACATGGAACTAATGAAACTGGTGGAGTTCTGGTCTTATGGTATGAAAACCTTTTCTGGTAGTGTAACAGGTGGAACAAAGGATATCCAAGAAATGATAGATTTCTTTACTTCAAATGGAATTCATCCAATGATTGAAATAATTCCAATTCAATCTGCAAATGAAGCTATTGAGAGGCTACTAAAAAGTGTTGTGATATACCGGTTGAGAGGCTACTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006725 GO:0008150 GO:0008152 GO:0009058 GO:0009698 GO:0009699 GO:0009808 GO:0009809 GO:0009987 GO:0019438 GO:0019748 GO:0044237 GO:0044249 GO:0044424 GO:0044444 GO:0044464 GO:0044550 GO:0071704 GO:1901360 GO:1901362 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00940 ko01100 ko01110 map00940 map01100 map01110

Pfam Domains

Protein Families

ADH_N ADH_zinc_N

Protein Analysis

168

Amino Acids

18.46

Weight (kDa)

7.94

Isoelectric Point (pI)

26.29

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0024545)

Species	Orthologous Gene IDs
prunus_persica	Prupe.1G565300_v2.0.a1 Prupe.4G100200_v2.0.a1 Prupe.5G136600_v2.0.a1

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	248
AccI	GTMKAC	1 cut(s)	240
AclWI	GGATC	2 cut(s)	224, 275
AcsI	RAATTY	1 cut(s)	405
AcvI	CACGTG	1 cut(s)	88
AfaI	GTAC	1 cut(s)	24
AgeI	ACCGGT	1 cut(s)	486
AgsI	TTSAA	4 cut(s)	121, 399, 422, 437
AjnI	CCWGG	2 cut(s)	43, 225
AluBI	AGCT	3 cut(s)	164, 175, 452
AluI	AGCT	3 cut(s)	164, 175, 452
Alw26I	GTCTC	1 cut(s)	202
AlwI	GGATC	2 cut(s)	224, 275
AoxI	GGCC	3 cut(s)	67, 76, 222
ApoI	RAATTY	1 cut(s)	405
AsiGI	ACCGGT	1 cut(s)	486
Asp700I	GAANNNNTTC	1 cut(s)	426
AspA2I	CCTAGG	1 cut(s)	79
AspS9I	GGNCC	1 cut(s)	223
AsuHPI	GGTGA	4 cut(s)	73, 241, 263, 278
AvrII	CCTAGG	1 cut(s)	79
BbrPI	CACGTG	1 cut(s)	88
BccI	CCATC	1 cut(s)	13
BciT130I	CCWGG	2 cut(s)	45, 227
BclI	TGATCA	1 cut(s)	268
BcoDI	GTCTC	1 cut(s)	202
BfaI	CTAG	3 cut(s)	56, 80, 141
BglI	GCCNNNNNGGC	1 cut(s)	75
BlnI	CCTAGG	1 cut(s)	79
Bme1390I	CCNGG	2 cut(s)	45, 227
BmgT120I	GGNCC	1 cut(s)	223
BmrFI	CCNGG	2 cut(s)	45, 227
BmsI	GCATC	2 cut(s)	169, 269
BsaAI	YACGTR	1 cut(s)	88
BsaI	GGTCTC	1 cut(s)	202
BsaJI	CCNNGG	3 cut(s)	70, 79, 225
BsaWI	WCCGGW	1 cut(s)	486
BsaXI	ACNNNNNCTCC	2 cut(s)	302, 332
Bse118I	RCCGGY	1 cut(s)	486
Bse1I	ACTGG	1 cut(s)	309
BseBI	CCWGG	2 cut(s)	45, 227
BseDI	CCNNGG	3 cut(s)	70, 79, 225
BseGI	GGATG	2 cut(s)	184, 409
BseNI	ACTGG	1 cut(s)	309
BshFI	GGCC	3 cut(s)	69, 78, 224
BshTI	ACCGGT	1 cut(s)	486
BsiSI	CCGG	1 cut(s)	487
BsmAI	GTCTC	1 cut(s)	202
BsnI	GGCC	3 cut(s)	69, 78, 224
Bso31I	GGTCTC	1 cut(s)	202
Bsp143I	GATC	3 cut(s)	216, 268, 280
BspANI	GGCC	3 cut(s)	69, 78, 224
BspPI	GGATC	2 cut(s)	224, 275
BspTNI	GGTCTC	1 cut(s)	202
BsrFI	RCCGGY	1 cut(s)	486
BsrI	ACTGG	1 cut(s)	309
BssAI	RCCGGY	1 cut(s)	486
BssECI	CCNNGG	3 cut(s)	70, 79, 225
BssMI	GATC	3 cut(s)	216, 268, 280
BssT1I	CCWWGG	2 cut(s)	70, 79
Bst2UI	CCWGG	2 cut(s)	45, 227
Bst4CI	ACNGT	1 cut(s)	7
BstBAI	YACGTR	1 cut(s)	88
BstF5I	GGATG	2 cut(s)	184, 409
BstKTI	GATC	3 cut(s)	219, 271, 283
BstMAI	GTCTC	1 cut(s)	202
BstMBI	GATC	3 cut(s)	216, 268, 280
BstMWI	GCNNNNNNNGC	2 cut(s)	75, 449
BstNI	CCWGG	2 cut(s)	45, 227
BstSCI	CCNGG	2 cut(s)	43, 225
BsuRI	GGCC	3 cut(s)	69, 78, 224
BtsCI	GGATG	2 cut(s)	184, 409
BtsI	GCAGTG	1 cut(s)	99
BtsIMutI	CAGTG	1 cut(s)	99
Cfr10I	RCCGGY	1 cut(s)	486
Cfr13I	GGNCC	1 cut(s)	223
CsiI	ACCWGGT	1 cut(s)	43
Csp6I	GTAC	1 cut(s)	23
CspAI	ACCGGT	1 cut(s)	486
CviAII	CATG	1 cut(s)	289
CviJI	RGCY	8 cut(s)	69, 78, 164, 175, 224, 452, 463, 498
CviKI_1	RGCY	8 cut(s)	69, 78, 164, 175, 224, 452, 463, 498
CviQI	GTAC	1 cut(s)	23
DpnI	GATC	3 cut(s)	218, 270, 282
DpnII	GATC	3 cut(s)	216, 268, 280
Eco130I	CCWWGG	2 cut(s)	70, 79
Eco31I	GGTCTC	1 cut(s)	202
Eco32I	GATATC	1 cut(s)	370
Eco72I	CACGTG	1 cut(s)	88
EcoO109I	RGGNCCY	1 cut(s)	223
EcoRI	GAATTC	1 cut(s)	405
EcoRII	CCWGG	2 cut(s)	43, 225
EcoRV	GATATC	1 cut(s)	370
EcoT14I	CCWWGG	2 cut(s)	70, 79
ErhI	CCWWGG	2 cut(s)	70, 79
FaeI	CATG	1 cut(s)	292
FaiI	YATR	9 cut(s)	12, 30, 146, 248, 286, 290, 324, 329, 484
FatI	CATG	1 cut(s)	288
FbaI	TGATCA	1 cut(s)	268
FblI	GTMKAC	1 cut(s)	240
FokI	GGATG	2 cut(s)	191, 396
FspBI	CTAG	3 cut(s)	56, 80, 141
HaeIII	GGCC	3 cut(s)	69, 78, 224
HapII	CCGG	1 cut(s)	487
Hin1II	CATG	1 cut(s)	292
HindIII	AAGCTT	1 cut(s)	162
HpaII	CCGG	1 cut(s)	487
HphI	GGTGA	4 cut(s)	73, 241, 263, 278
Hpy166II	GTNNAC	1 cut(s)	241
Hpy188I	TCNGA	2 cut(s)	205, 216
Hpy8I	GTNNAC	1 cut(s)	241
HpyCH4III	ACNGT	1 cut(s)	7
HpyCH4IV	ACGT	1 cut(s)	87
HpyCH4V	TGCA	2 cut(s)	182, 443
HpyF10VI	GCNNNNNNNGC	2 cut(s)	75, 449
HpySE526I	ACGT	1 cut(s)	87
Hsp92II	CATG	1 cut(s)	292
Ksp22I	TGATCA	1 cut(s)	268
Kzo9I	GATC	3 cut(s)	216, 268, 280
LweI	GCATC	2 cut(s)	169, 269
MabI	ACCWGGT	1 cut(s)	43
MaeI	CTAG	3 cut(s)	56, 80, 141
MaeII	ACGT	1 cut(s)	87
MaeIII	GTNAC	3 cut(s)	83, 124, 349
MalI	GATC	3 cut(s)	218, 270, 282
MboI	GATC	3 cut(s)	216, 268, 280
MluCI	AATT	5 cut(s)	129, 249, 405, 426, 432
MnlI	CCTC	3 cut(s)	151, 453, 488
MroXI	GAANNNNTTC	1 cut(s)	426
MseI	TTAA	1 cut(s)	167
MspA1I	CMGCKG	1 cut(s)	175
MspI	CCGG	1 cut(s)	487
MspR9I	CCNGG	2 cut(s)	45, 227
MvaI	CCWGG	2 cut(s)	45, 227
MwoI	GCNNNNNNNGC	2 cut(s)	75, 449
NdeII	GATC	3 cut(s)	216, 268, 280
NlaIII	CATG	1 cut(s)	292
NmuCI	GTSAC	1 cut(s)	83
PdmI	GAANNNNTTC	1 cut(s)	426
PinAI	ACCGGT	1 cut(s)	486
PmaCI	CACGTG	1 cut(s)	88
PmlI	CACGTG	1 cut(s)	88
Ppu21I	YACGTR	1 cut(s)	88
PsiI	TTATAA	1 cut(s)	248
Psp6I	CCWGG	2 cut(s)	43, 225
PspCI	CACGTG	1 cut(s)	88
PspGI	CCWGG	2 cut(s)	43, 225
PspPI	GGNCC	1 cut(s)	223
PvuII	CAGCTG	1 cut(s)	175
RsaI	GTAC	1 cut(s)	24
RsaNI	GTAC	1 cut(s)	23
SaqAI	TTAA	1 cut(s)	167
Sau3AI	GATC	3 cut(s)	216, 268, 280
Sau96I	GGNCC	1 cut(s)	223
ScrFI	CCNGG	2 cut(s)	45, 227
SetI	ASST	8 cut(s)	46, 85, 90, 166, 177, 338, 358, 454
SexAI	ACCWGGT	1 cut(s)	43
SfaNI	GCATC	2 cut(s)	169, 269
SfiI	GGCCNNNNNGGCC	1 cut(s)	75
Sse9I	AATT	5 cut(s)	129, 249, 405, 426, 432
SspMI	CTAG	3 cut(s)	56, 80, 141
StyD4I	CCNGG	2 cut(s)	43, 225
StyI	CCWWGG	2 cut(s)	70, 79
TaaI	ACNGT	1 cut(s)	7
TaiI	ACGT	1 cut(s)	90
TaqI	TCGA	1 cut(s)	17
TasI	AATT	5 cut(s)	129, 249, 405, 426, 432
Tru1I	TTAA	1 cut(s)	167
Tru9I	TTAA	1 cut(s)	167
TscAI	CASTG	1 cut(s)	99
TseFI	GTSAC	1 cut(s)	83
Tsp45I	GTSAC	1 cut(s)	83
TspDTI	ATGAA	5 cut(s)	50, 314, 344, 398, 462
TspRI	CASTG	1 cut(s)	99
XapI	RAATTY	1 cut(s)	405
XmaJI	CCTAGG	1 cut(s)	79
XmiI	GTMKAC	1 cut(s)	240
XmnI	GAANNNNTTC	1 cut(s)	426
XspI	CTAG	3 cut(s)	56, 80, 141

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.