Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp05

Orthogroup ID

OG0024545

Physical Location & Seq

Genomic Coordinates Reverse (-)

12918725 .. 12919766

Gene Structure 1042 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.5G136600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 675 bp

ATGGGAGTGGGAACTCATGTCAACTCATGCAGAGATTGTGAGTACTGCAATGACAGATTTAATGGTGTTGATGCTGATGGTACAATCACAAAAGGAGGATACTCCAGTCATATATTTGTCCATGAATGGTACTGCTTCAACATACCAGAAAACTATCCATTGGCTTCGGCAGCCCCTCTACTTTGTGCTGGAATTACTGTTTATGCTTCGATGGTATGCCACGAGATGAACCAACATGGTCACATGGCAGTGAAGTTTGGCAAGGCATTTGGCTTGAATGTAACAATTTTCAGCACTAGCATATCCAAGGAAGAGGAAGCTTTAGGTCAGCTGGGTGCAGATAACTTTGTGGTCTCATCTGACAGAAATCAGATGAAGGCCCTGGTGAAGTCAGTAGACTTTATAATTGAGATAGCATCTGGTGATCACCCTTTTGATCCATACATGGAACTATTGAAACTGTTTTATATATCCAACTGTATGAAAACCATTTCTGGTAGTGTAACAGGTGGAACAAAGGATATCCAAGAAATGATAGATTTCTGTGCTTCATATGGAATTCATCCAATGATTGAAATAATTCCAATTCAATCTGCAAATGAAGCTATTGAGAGGCTACTAAAAAGTGTTGTGATATACCGGTTTGTGATTGATATTGAAAACTACCTGAAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006725 GO:0008150 GO:0008152 GO:0009058 GO:0009698 GO:0009699 GO:0009808 GO:0009809 GO:0009987 GO:0019438 GO:0019748 GO:0044237 GO:0044249 GO:0044424 GO:0044444 GO:0044464 GO:0044550 GO:0071704 GO:1901360 GO:1901362 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00940 ko01100 ko01110 map00940 map01100 map01110

Pfam Domains

Protein Families

ADH_N ADH_zinc_N

Protein Analysis

225

Amino Acids

24.83

Weight (kDa)

5.17

Isoelectric Point (pI)

30.34

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0024545)

Species	Orthologous Gene IDs
prunus_persica	Prupe.1G565300_v2.0.a1 Prupe.4G100200_v2.0.a1 Prupe.5G136600_v2.0.a1

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	404
AccI	GTMKAC	1 cut(s)	396
AclWI	GGATC	1 cut(s)	431
AcsI	RAATTY	1 cut(s)	558
AfaI	GTAC	3 cut(s)	44, 82, 131
AgeI	ACCGGT	1 cut(s)	639
AgsI	TTSAA	6 cut(s)	139, 277, 457, 575, 590, 659
AjnI	CCWGG	1 cut(s)	381
AluBI	AGCT	3 cut(s)	320, 331, 605
AluI	AGCT	3 cut(s)	320, 331, 605
Alw26I	GTCTC	1 cut(s)	358
AlwI	GGATC	1 cut(s)	431
AoxI	GGCC	1 cut(s)	378
ApeKI	GCWGC	1 cut(s)	170
ApoI	RAATTY	1 cut(s)	558
AsiGI	ACCGGT	1 cut(s)	639
Asp700I	GAANNNNTTC	1 cut(s)	579
AspS9I	GGNCC	1 cut(s)	379
AsuHPI	GGTGA	3 cut(s)	397, 419, 434
BaeI	ACNNNNGTAYC	2 cut(s)	91, 124
BauI	CACGAG	1 cut(s)	221
BbvI	GCAGC	1 cut(s)	182
BccI	CCATC	2 cut(s)	71, 205
BciT130I	CCWGG	1 cut(s)	383
BciVI	GTATCC	1 cut(s)	92
BclI	TGATCA	1 cut(s)	424
BcoDI	GTCTC	1 cut(s)	358
BfaI	CTAG	1 cut(s)	297
BfuI	GTATCC	1 cut(s)	92
BisI	GCNGC	1 cut(s)	171
BlsI	GCNGC	1 cut(s)	172
BmcAI	AGTACT	1 cut(s)	44
Bme1390I	CCNGG	1 cut(s)	383
BmgT120I	GGNCC	1 cut(s)	379
BmrFI	CCNGG	1 cut(s)	383
BmsI	GCATC	2 cut(s)	61, 425
BpmI	CTGGAG	1 cut(s)	88
BsaI	GGTCTC	1 cut(s)	358
BsaJI	CCNNGG	2 cut(s)	306, 381
BsaWI	WCCGGW	1 cut(s)	639
Bse118I	RCCGGY	1 cut(s)	639
Bse1I	ACTGG	1 cut(s)	105
Bse3DI	GCAATG	1 cut(s)	55
BseBI	CCWGG	1 cut(s)	383
BseDI	CCNNGG	2 cut(s)	306, 381
BseGI	GGATG	1 cut(s)	562
BseMI	GCAATG	1 cut(s)	55
BseNI	ACTGG	1 cut(s)	105
BseXI	GCAGC	1 cut(s)	182
BseYI	CCCAGC	1 cut(s)	331
BsgI	GTGCAG	1 cut(s)	357
BshFI	GGCC	1 cut(s)	380
BshTI	ACCGGT	1 cut(s)	639
BsiSI	CCGG	1 cut(s)	640
BsmAI	GTCTC	1 cut(s)	358
BsnI	GGCC	1 cut(s)	380
Bso31I	GGTCTC	1 cut(s)	358
Bsp143I	GATC	2 cut(s)	424, 436
BspANI	GGCC	1 cut(s)	380
BspPI	GGATC	1 cut(s)	431
BspTNI	GGTCTC	1 cut(s)	358
BsrDI	GCAATG	1 cut(s)	55
BsrFI	RCCGGY	1 cut(s)	639
BsrI	ACTGG	1 cut(s)	105
BssAI	RCCGGY	1 cut(s)	639
BssECI	CCNNGG	2 cut(s)	306, 381
BssMI	GATC	2 cut(s)	424, 436
BssSI	CACGAG	1 cut(s)	221
BssT1I	CCWWGG	1 cut(s)	306
Bst2BI	CACGAG	1 cut(s)	221
Bst2UI	CCWGG	1 cut(s)	383
Bst4CI	ACNGT	3 cut(s)	199, 462, 479
Bst6I	CTCTTC	1 cut(s)	306
BstF5I	GGATG	1 cut(s)	562
BstKTI	GATC	2 cut(s)	427, 439
BstMAI	GTCTC	1 cut(s)	358
BstMBI	GATC	2 cut(s)	424, 436
BstMWI	GCNNNNNNNGC	2 cut(s)	170, 602
BstNI	CCWGG	1 cut(s)	383
BstSCI	CCNGG	1 cut(s)	381
BstV1I	GCAGC	1 cut(s)	182
BsuI	GTATCC	1 cut(s)	92
BsuRI	GGCC	1 cut(s)	380
BtsCI	GGATG	1 cut(s)	562
BtsI	GCAGTG	1 cut(s)	255
BtsIMutI	CAGTG	1 cut(s)	255
Cfr10I	RCCGGY	1 cut(s)	639
Cfr13I	GGNCC	1 cut(s)	379
Csp6I	GTAC	3 cut(s)	43, 81, 130
CspAI	ACCGGT	1 cut(s)	639
CviAII	CATG	6 cut(s)	17, 27, 122, 236, 244, 445
CviJI	RGCY	8 cut(s)	164, 173, 273, 320, 331, 380, 605, 616
CviKI_1	RGCY	8 cut(s)	164, 173, 273, 320, 331, 380, 605, 616
CviQI	GTAC	3 cut(s)	43, 81, 130
DpnI	GATC	2 cut(s)	426, 438
DpnII	GATC	2 cut(s)	424, 436
Eam1104I	CTCTTC	1 cut(s)	306
EarI	CTCTTC	1 cut(s)	306
Eco130I	CCWWGG	1 cut(s)	306
Eco31I	GGTCTC	1 cut(s)	358
Eco32I	GATATC	1 cut(s)	523
EcoO109I	RGGNCCY	1 cut(s)	379
EcoRI	GAATTC	1 cut(s)	558
EcoRII	CCWGG	1 cut(s)	381
EcoRV	GATATC	1 cut(s)	523
EcoT14I	CCWWGG	1 cut(s)	306
ErhI	CCWWGG	1 cut(s)	306
FaeI	CATG	6 cut(s)	20, 30, 125, 239, 247, 448
FatI	CATG	6 cut(s)	16, 26, 121, 235, 243, 444
FauNDI	CATATG	1 cut(s)	553
FbaI	TGATCA	1 cut(s)	424
FblI	GTMKAC	1 cut(s)	396
Fnu4HI	GCNGC	1 cut(s)	171
FokI	GGATG	1 cut(s)	549
Fsp4HI	GCNGC	1 cut(s)	171
FspBI	CTAG	1 cut(s)	297
GluI	GCNGC	1 cut(s)	171
GsaI	CCCAGC	1 cut(s)	335
GsuI	CTGGAG	1 cut(s)	88
HaeIII	GGCC	1 cut(s)	380
HapII	CCGG	1 cut(s)	640
Hin1II	CATG	6 cut(s)	20, 30, 125, 239, 247, 448
HincII	GTYRAC	1 cut(s)	22
HindII	GTYRAC	1 cut(s)	22
HindIII	AAGCTT	1 cut(s)	318
HpaII	CCGG	1 cut(s)	640
HphI	GGTGA	3 cut(s)	397, 419, 434
Hpy166II	GTNNAC	2 cut(s)	22, 397
Hpy188I	TCNGA	2 cut(s)	361, 372
Hpy8I	GTNNAC	2 cut(s)	22, 397
HpyAV	CCTTC	1 cut(s)	370
HpyCH4III	ACNGT	3 cut(s)	199, 462, 479
HpyCH4V	TGCA	4 cut(s)	30, 48, 338, 596
HpyF10VI	GCNNNNNNNGC	2 cut(s)	170, 602
Hsp92II	CATG	6 cut(s)	20, 30, 125, 239, 247, 448
Ksp22I	TGATCA	1 cut(s)	424
Kzo9I	GATC	2 cut(s)	424, 436
Lsp1109I	GCAGC	1 cut(s)	182
LweI	GCATC	2 cut(s)	61, 425
MaeI	CTAG	1 cut(s)	297
MaeIII	GTNAC	3 cut(s)	239, 280, 502
MalI	GATC	2 cut(s)	426, 438
MboI	GATC	2 cut(s)	424, 436
MboII	GAAGA	1 cut(s)	323
MluCI	AATT	6 cut(s)	192, 285, 405, 558, 579, 585
MmeI	TCCRAC	1 cut(s)	498
MnlI	CCTC	4 cut(s)	89, 186, 307, 606
MroXI	GAANNNNTTC	1 cut(s)	579
MseI	TTAA	1 cut(s)	60
MslI	CAYNNNNRTG	1 cut(s)	248
MspA1I	CMGCKG	1 cut(s)	331
MspI	CCGG	1 cut(s)	640
MspR9I	CCNGG	1 cut(s)	383
MvaI	CCWGG	1 cut(s)	383
MwoI	GCNNNNNNNGC	2 cut(s)	170, 602
NdeI	CATATG	1 cut(s)	553
NdeII	GATC	2 cut(s)	424, 436
NlaIII	CATG	6 cut(s)	20, 30, 125, 239, 247, 448
NmuCI	GTSAC	1 cut(s)	239
PdmI	GAANNNNTTC	1 cut(s)	579
PinAI	ACCGGT	1 cut(s)	639
PkrI	GCNGC	1 cut(s)	172
PsiI	TTATAA	1 cut(s)	404
Psp6I	CCWGG	1 cut(s)	381
PspFI	CCCAGC	1 cut(s)	331
PspGI	CCWGG	1 cut(s)	381
PspPI	GGNCC	1 cut(s)	379
PvuII	CAGCTG	1 cut(s)	331
RsaI	GTAC	3 cut(s)	44, 82, 131
RsaNI	GTAC	3 cut(s)	43, 81, 130
RseI	CAYNNNNRTG	1 cut(s)	248
SaqAI	TTAA	1 cut(s)	60
SatI	GCNGC	1 cut(s)	171
Sau3AI	GATC	2 cut(s)	424, 436
Sau96I	GGNCC	1 cut(s)	379
ScaI	AGTACT	1 cut(s)	44
ScrFI	CCNGG	1 cut(s)	383
SetI	ASST	6 cut(s)	322, 328, 333, 511, 607, 669
SfaNI	GCATC	2 cut(s)	61, 425
SmiMI	CAYNNNNRTG	1 cut(s)	248
Sse9I	AATT	6 cut(s)	192, 285, 405, 558, 579, 585
SspMI	CTAG	1 cut(s)	297
StyD4I	CCNGG	1 cut(s)	381
StyI	CCWWGG	1 cut(s)	306
TaaI	ACNGT	3 cut(s)	199, 462, 479
TaqI	TCGA	1 cut(s)	209
TasI	AATT	6 cut(s)	192, 285, 405, 558, 579, 585
TatI	WGTACW	1 cut(s)	42
Tru1I	TTAA	1 cut(s)	60
Tru9I	TTAA	1 cut(s)	60
TscAI	CASTG	1 cut(s)	255
TseFI	GTSAC	1 cut(s)	239
TseI	GCWGC	1 cut(s)	170
Tsp45I	GTSAC	1 cut(s)	239
TspDTI	ATGAA	7 cut(s)	138, 242, 389, 497, 540, 551, 615
TspRI	CASTG	1 cut(s)	255
XapI	RAATTY	1 cut(s)	558
XmiI	GTMKAC	1 cut(s)	396
XmnI	GAANNNNTTC	1 cut(s)	579
XspI	CTAG	1 cut(s)	297
ZrmI	AGTACT	1 cut(s)	44

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.