Prupe.4G233300_v2.0.a1

Calcium-dependent protein kinase

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp04
Physical Location & Seq
Forward (+)
15031634 .. 15034259
2626 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.4G233300.4

Sequence Viewer

Length: 261 bp
ATGAACAACAAACCAAGCTCAGCCACACCACCATCGTCAAAACCCACATGGGTCCTGCCCTACAAGACCCAAAACCTCACTGACCTCTACACTTTGGATAAGATTTTGAGTGCTCGAGTCCACGACATGATCAACACCTCCAGCATGGGCTACCTCCACGATCCGAGAAGCCCACAACCACACCGACCTCATCGTGGTTTCGATCTACGTGAACCCAGGTCAGTTCTCTCCCTCCGAAGACCTCTCCATCTACTCATCTGA

Protein Analysis

87

Amino Acids

9.9

Weight (kDa)

10.35

Isoelectric Point (pI)

56.61

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AclWI GGATC 1 cut(s) 155
AfiI CCNNNNNNNGG 1 cut(s) 194
AjnI CCWGG 1 cut(s) 215
AluBI AGCT 1 cut(s) 18
AluI AGCT 1 cut(s) 18
Alw21I GWGCWC 1 cut(s) 115
AlwI GGATC 1 cut(s) 155
Ama87I CYCGRG 1 cut(s) 114
AspS9I GGNCC 1 cut(s) 52
AvaI CYCGRG 1 cut(s) 114
AvaII GGWCC 1 cut(s) 52
BbsI GAAGAC 1 cut(s) 244
Bbv12I GWGCWC 1 cut(s) 115
BccI CCATC 2 cut(s) 40, 255
BciT130I CCWGG 1 cut(s) 217
BclI TGATCA 1 cut(s) 129
BlpI GCTNAGC 1 cut(s) 19
Bme1390I CCNGG 1 cut(s) 217
Bme18I GGWCC 1 cut(s) 52
BmeT110I CYCGRG 1 cut(s) 114
BmgT120I GGNCC 1 cut(s) 52
BmiI GGNNCC 1 cut(s) 53
BmrFI CCNGG 1 cut(s) 217
BpiI GAAGAC 1 cut(s) 244
BpmI CTGGAG 1 cut(s) 124
Bpu1102I GCTNAGC 1 cut(s) 19
BsaAI YACGTR 1 cut(s) 209
BsaJI CCNNGG 1 cut(s) 215
Bsc4I CCNNNNNNNGG 1 cut(s) 194
BseBI CCWGG 1 cut(s) 217
BseDI CCNNGG 1 cut(s) 215
BseLI CCNNNNNNNGG 1 cut(s) 194
BseMII CTCAG 1 cut(s) 33
BsiHKAI GWGCWC 1 cut(s) 115
BsiHKCI CYCGRG 1 cut(s) 114
BslI CCNNNNNNNGG 1 cut(s) 194
BsoBI CYCGRG 1 cut(s) 114
Bsp1286I GDGCHC 1 cut(s) 115
Bsp143I GATC 3 cut(s) 129, 160, 202
Bsp1720I GCTNAGC 1 cut(s) 19
BspCNI CTCAG 1 cut(s) 32
BspLI GGNNCC 1 cut(s) 53
BspPI GGATC 1 cut(s) 155
BssECI CCNNGG 1 cut(s) 215
BssMI GATC 3 cut(s) 129, 160, 202
Bst2UI CCWGG 1 cut(s) 217
BstBAI YACGTR 1 cut(s) 209
BstDEI CTNAG 1 cut(s) 19
BstKTI GATC 3 cut(s) 132, 163, 205
BstMBI GATC 3 cut(s) 129, 160, 202
BstNI CCWGG 1 cut(s) 217
BstSCI CCNGG 1 cut(s) 215
BstV2I GAAGAC 1 cut(s) 244
BtsIMutI CAGTG 1 cut(s) 78
Cfr13I GGNCC 1 cut(s) 52
CviAII CATG 3 cut(s) 48, 127, 145
CviJI RGCY 4 cut(s) 18, 23, 150, 171
CviKI_1 RGCY 4 cut(s) 18, 23, 150, 171
DdeI CTNAG 1 cut(s) 19
DpnI GATC 3 cut(s) 131, 162, 204
DpnII GATC 3 cut(s) 129, 160, 202
Eco47I GGWCC 1 cut(s) 52
Eco88I CYCGRG 1 cut(s) 114
EcoO109I RGGNCCY 1 cut(s) 52
EcoRII CCWGG 1 cut(s) 215
FaeI CATG 3 cut(s) 51, 130, 148
FaiI YATR 3 cut(s) 49, 128, 146
FatI CATG 3 cut(s) 47, 126, 144
FbaI TGATCA 1 cut(s) 129
GsuI CTGGAG 1 cut(s) 124
Hin1II CATG 3 cut(s) 51, 130, 148
HinfI GANTC 1 cut(s) 117
Hpy166II GTNNAC 2 cut(s) 121, 212
Hpy188I TCNGA 3 cut(s) 165, 236, 260
Hpy8I GTNNAC 2 cut(s) 121, 212
HpyCH4IV ACGT 1 cut(s) 208
HpyF3I CTNAG 1 cut(s) 19
HpySE526I ACGT 1 cut(s) 208
Hsp92II CATG 3 cut(s) 51, 130, 148
Ksp22I TGATCA 1 cut(s) 129
Kzo9I GATC 3 cut(s) 129, 160, 202
LpnPI CCDG 4 cut(s) 68, 154, 202, 229
MaeII ACGT 1 cut(s) 208
MalI GATC 3 cut(s) 131, 162, 204
MboI GATC 3 cut(s) 129, 160, 202
MboII GAAGA 1 cut(s) 249
MhlI GDGCHC 1 cut(s) 115
MlyI GAGTC 1 cut(s) 126
MnlI CCTC 7 cut(s) 86, 95, 148, 164, 198, 242, 252
MspR9I CCNGG 1 cut(s) 217
MvaI CCWGG 1 cut(s) 217
NdeII GATC 3 cut(s) 129, 160, 202
NlaIII CATG 3 cut(s) 51, 130, 148
NlaIV GGNNCC 1 cut(s) 53
PaeR7I CTCGAG 1 cut(s) 114
PleI GAGTC 1 cut(s) 125
PpsI GAGTC 1 cut(s) 125
Ppu21I YACGTR 1 cut(s) 209
PpuMI RGGWCCY 1 cut(s) 52
Psp5II RGGWCCY 1 cut(s) 52
Psp6I CCWGG 1 cut(s) 215
PspGI CCWGG 1 cut(s) 215
PspN4I GGNNCC 1 cut(s) 53
PspPI GGNCC 1 cut(s) 52
PspPPI RGGWCCY 1 cut(s) 52
PspXI VCTCGAGB 1 cut(s) 114
Sau3AI GATC 3 cut(s) 129, 160, 202
Sau96I GGNCC 1 cut(s) 52
SchI GAGTC 1 cut(s) 126
ScrFI CCNGG 1 cut(s) 217
SduI GDGCHC 1 cut(s) 115
SetI ASST 9 cut(s) 20, 78, 87, 140, 156, 190, 211, 221, 244
Sfr274I CTCGAG 1 cut(s) 114
SinI GGWCC 1 cut(s) 52
SlaI CTCGAG 1 cut(s) 114
SmlI CTYRAG 1 cut(s) 114
SmoI CTYRAG 1 cut(s) 114
StyD4I CCNGG 1 cut(s) 215
TaiI ACGT 1 cut(s) 211
TaqI TCGA 2 cut(s) 115, 201
TscAI CASTG 1 cut(s) 85
TspDTI ATGAA 1 cut(s) 17
TspRI CASTG 1 cut(s) 85
VpaK11BI GGWCC 1 cut(s) 52
XhoI CTCGAG 1 cut(s) 114
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.