Prupe.4G245800_v2.0.a1

1-acyl-sn-glycerol-3-phosphate acyltransferase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp04
OG0024324
Physical Location & Seq
Reverse (-)
16312077 .. 16317360
5284 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.4G245800.2

Sequence Viewer

Length: 1146 bp
ATGGAGCTTAAAGCTGTAGTTTTCTCAATTCCTTTTGGTGTAATCTTTGTTGTCCTTGGTCTCTTTGTCAACCTTCTCCAGGCCATTTGCTTTCTTACTATTCGACCTTTGTCCAAGAGTACATATAGAAAGATCAATGGAACAATTGCATCACTTTTATGGTTGGATCACATTTGGCTCTTGGAGTGGTGGGCAGGCCTTAAGGTTAAACTGTACACAGATTTGGAAACTTATCGACTAATGGGCGAAGAGCATGCGCTTCTCATGCCCAACCACATGTGTGATGCTGATATTCTTATTGGGTTTCTTTTAGCTCAGCGATTGGGTTGCCTCCGTAGTGCTCTTATGGTTATGAAGAAATCTGCAAAATTCCTTCCTATTTTTGGGTGGACATCTTGGTTTCTAGGGTTTGTTTTCCTCAACAGAAGCTGGGAAAAAGATGAAAGTAACCTAAAGAGAAGTTTACAAGGGTTAAAGGATTTTCCCATGCCATTTTGGCTTACCATATTTGCGGAAGGAACACGCATGACCCCTGACAAGCTTTCAGAAGCTCAAAAGTTTGCTGCTTCTAGGAAACTGCCTATCCCTAAGAATGTCTTGATTCCTCGTACCAAGGGTTTTGTTACAGCAGTGAAGAATTTGAGATCATTTGTCCCTGCAGTGTATGATGTTACTCTTGCTGTTCCAGAAGGTCATTCAACTCCTTCCCTGCATACCATGATGGAAAGGAAAAGTACTATGGTAAAAATACATATAAAACGATACCCAATGAAGGATTTGCCACAATCAGATGAGGCCATTGCTCAGTGGTGCAGAGACAGGTTTGTGGCCAAGGATTCCATGTTGGACAAGTTTCGGGCTGAGGGTACCTTCGGTGACCAAGAAATTCATGACACTGGTCGATCTATTATGGCATTGCTTGCTCATAGCAGCAGCTGCTATCTAATTTATTTTGCGATGATGAAACTGTGCCAAAAGTTCTCCCTTCTATCGACATGGAGAGGGGTGGGCGTTTTAGTAACTTCCTTCGCCGCCACTGTGCTCCTCATGCATATTTTCATCGAATACACAAAGTTGCCCAAACAAAAAGGAGTTCAAACTACTCAATCAACAAGAGGCAAAGCTACAGATTTCAAATTCAACTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00561 ko00564 ko01100 ko01110 ko04072 map00561 map00564 map01100 map01110 map04072
Pfam Domains
Protein Families
Acyltransf_C Acyltransferase

Protein Analysis

382

Amino Acids

43.54

Weight (kDa)

9.66

Isoelectric Point (pI)

35.75

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0024324)

Species Orthologous Gene IDs
malus_domestica MD03G1177000.v1.1
prunus_persica Prupe.4G245800_v2.0.a1 Prupe.4G245800_v2.0.a1

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 866
AccB1I GGYRCC 1 cut(s) 866
AciI CCGC 2 cut(s) 512, 1032
AclWI GGATC 1 cut(s) 174
AcoI YGGCCR 1 cut(s) 828
AcsI RAATTY 4 cut(s) 368, 637, 885, 1136
AfaI GTAC 5 cut(s) 121, 215, 610, 736, 868
AfiI CCNNNNNNNGG 3 cut(s) 79, 383, 772
AflII CTTAAG 1 cut(s) 200
AflIII ACRYGT 1 cut(s) 276
AgsI TTSAA 4 cut(s) 699, 1097, 1135, 1141
AjnI CCWGG 1 cut(s) 78
AleI CACNNNNGTG 1 cut(s) 279
AluBI AGCT 8 cut(s) 7, 14, 314, 429, 541, 551, 936, 1124
AluI AGCT 8 cut(s) 7, 14, 314, 429, 541, 551, 936, 1124
Alw21I GWGCWC 2 cut(s) 343, 1044
Alw26I GTCTC 2 cut(s) 65, 810
AlwI GGATC 1 cut(s) 174
AlwNI CAGNNNCTG 2 cut(s) 429, 936
AoxI GGCC 4 cut(s) 81, 196, 795, 828
ApeKI GCWGC 4 cut(s) 563, 930, 933, 936
ApoI RAATTY 4 cut(s) 368, 637, 885, 1136
Asp718I GGTACC 1 cut(s) 866
AspLEI GCGC 1 cut(s) 259
AsuHPI GGTGA 1 cut(s) 887
BalI TGGCCA 1 cut(s) 830
BanI GGYRCC 1 cut(s) 866
Bbv12I GWGCWC 2 cut(s) 343, 1044
BbvCI CCTCAGC 1 cut(s) 861
BbvI GCAGC 4 cut(s) 550, 923, 942, 945
BccI CCATC 1 cut(s) 715
BcgI CGANNNNNNTGC 4 cut(s) 236, 270, 309, 343
BciT130I CCWGG 1 cut(s) 80
BcoDI GTCTC 2 cut(s) 65, 810
BfaI CTAG 2 cut(s) 404, 570
BfmI CTRYAG 3 cut(s) 15, 657, 1125
BfrI CTTAAG 1 cut(s) 200
BglI GCCNNNNNGGC 1 cut(s) 496
BisI GCNGC 5 cut(s) 564, 931, 934, 937, 1032
BlpI GCTNAGC 1 cut(s) 315
BlsI GCNGC 5 cut(s) 565, 932, 935, 938, 1033
BmcAI AGTACT 1 cut(s) 736
Bme1390I CCNGG 1 cut(s) 80
BmiI GGNNCC 1 cut(s) 868
BmrFI CCNGG 1 cut(s) 80
BmsI GCATC 2 cut(s) 158, 274
BoxI GACNNNNGTC 2 cut(s) 109, 897
BpmI CTGGAG 1 cut(s) 62
Bpu10I CCTNAGC 1 cut(s) 861
Bpu1102I GCTNAGC 1 cut(s) 315
BsaI GGTCTC 1 cut(s) 65
BsaJI CCNNGG 3 cut(s) 55, 612, 831
Bsc4I CCNNNNNNNGG 3 cut(s) 79, 383, 772
Bse1I ACTGG 1 cut(s) 901
Bse3DI GCAATG 2 cut(s) 798, 914
BseBI CCWGG 1 cut(s) 80
BseDI CCNNGG 3 cut(s) 55, 612, 831
BseLI CCNNNNNNNGG 3 cut(s) 79, 383, 772
BseMI GCAATG 2 cut(s) 798, 914
BseMII CTCAG 3 cut(s) 329, 818, 852
BseNI ACTGG 1 cut(s) 901
BseRI GAGGAG 1 cut(s) 1034
BseXI GCAGC 4 cut(s) 550, 923, 942, 945
BseYI CCCAGC 1 cut(s) 429
BsgI GTGCAG 1 cut(s) 832
BshFI GGCC 4 cut(s) 83, 198, 797, 830
BshNI GGYRCC 1 cut(s) 866
BsiHKAI GWGCWC 2 cut(s) 343, 1044
BslFI GGGAC 1 cut(s) 638
BslI CCNNNNNNNGG 3 cut(s) 79, 383, 772
BsmAI GTCTC 2 cut(s) 65, 810
BsmFI GGGAC 1 cut(s) 638
BsnI GGCC 4 cut(s) 83, 198, 797, 830
Bso31I GGTCTC 1 cut(s) 65
Bsp1286I GDGCHC 2 cut(s) 343, 1044
Bsp1407I TGTACA 1 cut(s) 213
Bsp143I GATC 4 cut(s) 132, 166, 644, 902
Bsp1720I GCTNAGC 1 cut(s) 315
BspACI CCGC 2 cut(s) 512, 1032
BspANI GGCC 4 cut(s) 83, 198, 797, 830
BspCNI CTCAG 3 cut(s) 328, 817, 853
BspHI TCATGA 1 cut(s) 889
BspLI GGNNCC 1 cut(s) 868
BspMAI CTGCAG 1 cut(s) 661
BspPI GGATC 1 cut(s) 174
BspQI GCTCTTC 1 cut(s) 243
BspT107I GGYRCC 1 cut(s) 866
BspTI CTTAAG 1 cut(s) 200
BspTNI GGTCTC 1 cut(s) 65
BsrDI GCAATG 2 cut(s) 798, 914
BsrGI TGTACA 1 cut(s) 213
BsrI ACTGG 1 cut(s) 901
BssECI CCNNGG 3 cut(s) 55, 612, 831
BssMI GATC 4 cut(s) 132, 166, 644, 902
BssT1I CCWWGG 3 cut(s) 55, 612, 831
Bst2UI CCWGG 1 cut(s) 80
Bst4CI ACNGT 3 cut(s) 213, 969, 1039
Bst6I CTCTTC 1 cut(s) 243
BstAFI CTTAAG 1 cut(s) 200
BstAPI GCANNNNNTGC 2 cut(s) 920, 936
BstAUI TGTACA 1 cut(s) 213
BstC8I GCNNGC 3 cut(s) 196, 255, 921
BstDEI CTNAG 4 cut(s) 315, 588, 804, 861
BstEII GGTNACC 1 cut(s) 875
BstENI CCTNNNNNAGG 1 cut(s) 77
BstHHI GCGC 1 cut(s) 259
BstKTI GATC 4 cut(s) 135, 169, 647, 905
BstMAI GTCTC 2 cut(s) 65, 810
BstMBI GATC 4 cut(s) 132, 166, 644, 902
BstMWI GCNNNNNNNGC 5 cut(s) 265, 496, 920, 936, 1048
BstNI CCWGG 1 cut(s) 80
BstNSI RCATGY 2 cut(s) 257, 280
BstPAI GACNNNNGTC 2 cut(s) 109, 897
BstPI GGTNACC 1 cut(s) 875
BstSCI CCNGG 1 cut(s) 78
BstSFI CTRYAG 3 cut(s) 15, 657, 1125
BstV1I GCAGC 4 cut(s) 550, 923, 942, 945
BsuRI GGCC 4 cut(s) 83, 198, 797, 830
BtgZI GCGATG 1 cut(s) 971
BtsI GCAGTG 2 cut(s) 636, 666
BtsIMutI CAGTG 5 cut(s) 636, 666, 812, 894, 1035
Cac8I GCNNGC 3 cut(s) 196, 255, 921
CaiI CAGNNNCTG 2 cut(s) 429, 936
CciI TCATGA 1 cut(s) 889
CfoI GCGC 1 cut(s) 259
Csp6I GTAC 5 cut(s) 120, 214, 609, 735, 867
CviQI GTAC 5 cut(s) 120, 214, 609, 735, 867
DdeI CTNAG 4 cut(s) 315, 588, 804, 861
DpnI GATC 4 cut(s) 134, 168, 646, 904
DpnII GATC 4 cut(s) 132, 166, 644, 902
EaeI YGGCCR 1 cut(s) 828
Eam1104I CTCTTC 1 cut(s) 243
EarI CTCTTC 1 cut(s) 243
Eco130I CCWWGG 3 cut(s) 55, 612, 831
Eco147I AGGCCT 1 cut(s) 198
Eco31I GGTCTC 1 cut(s) 65
Eco91I GGTNACC 1 cut(s) 875
EcoNI CCTNNNNNAGG 1 cut(s) 77
EcoO65I GGTNACC 1 cut(s) 875
EcoRII CCWGG 1 cut(s) 78
EcoT14I CCWWGG 3 cut(s) 55, 612, 831
EcoT22I ATGCAT 1 cut(s) 1053
ErhI CCWWGG 3 cut(s) 55, 612, 831
FalI AAGNNNNNCTT 2 cut(s) 581, 613
FaqI GGGAC 1 cut(s) 638
Fnu4HI GCNGC 5 cut(s) 564, 931, 934, 937, 1032
Fsp4HI GCNGC 5 cut(s) 564, 931, 934, 937, 1032
FspBI CTAG 2 cut(s) 404, 570
GlaI GCGC 1 cut(s) 258
GluI GCNGC 5 cut(s) 564, 931, 934, 937, 1032
GsaI CCCAGC 1 cut(s) 433
GsuI CTGGAG 1 cut(s) 62
HaeIII GGCC 4 cut(s) 83, 198, 797, 830
HhaI GCGC 1 cut(s) 259
Hin6I GCGC 1 cut(s) 257
HinP1I GCGC 1 cut(s) 257
HincII GTYRAC 1 cut(s) 70
HindII GTYRAC 1 cut(s) 70
HindIII AAGCTT 1 cut(s) 539
HinfI GANTC 2 cut(s) 601, 836
HphI GGTGA 1 cut(s) 887
Hpy166II GTNNAC 4 cut(s) 70, 216, 390, 464
Hpy188I TCNGA 2 cut(s) 547, 790
Hpy188III TCNNGA 3 cut(s) 598, 686, 890
Hpy8I GTNNAC 4 cut(s) 70, 216, 390, 464
HpyAV CCTTC 9 cut(s) 83, 383, 509, 683, 714, 766, 880, 995, 1036
HpyCH4III ACNGT 3 cut(s) 213, 969, 1039
HpyCH4V TGCA 6 cut(s) 149, 365, 659, 712, 813, 1051
HpyF10VI GCNNNNNNNGC 5 cut(s) 265, 496, 920, 936, 1048
HpyF3I CTNAG 4 cut(s) 315, 588, 804, 861
HspAI GCGC 1 cut(s) 257
KpnI GGTACC 1 cut(s) 870
Kzo9I GATC 4 cut(s) 132, 166, 644, 902
LguI GCTCTTC 1 cut(s) 243
LmnI GCTCC 2 cut(s) 4, 1047
Lsp1109I GCAGC 4 cut(s) 550, 923, 942, 945
LweI GCATC 2 cut(s) 158, 274
MaeI CTAG 2 cut(s) 404, 570
MaeIII GTNAC 5 cut(s) 446, 622, 670, 875, 1018
MalI GATC 4 cut(s) 134, 168, 646, 904
MboI GATC 4 cut(s) 132, 166, 644, 902
MboII GAAGA 3 cut(s) 260, 367, 646
MfeI CAATTG 1 cut(s) 144
MhlI GDGCHC 2 cut(s) 343, 1044
MlsI TGGCCA 1 cut(s) 830
MluCI AATT 7 cut(s) 27, 144, 368, 637, 885, 945, 1136
MluNI TGGCCA 1 cut(s) 830
MmeI TCCRAC 2 cut(s) 144, 825
MnlI CCTC 8 cut(s) 341, 428, 615, 787, 856, 995, 1055, 1109
Mox20I TGGCCA 1 cut(s) 830
Mph1103I ATGCAT 1 cut(s) 1053
MscI TGGCCA 1 cut(s) 830
MseI TTAA 4 cut(s) 9, 201, 207, 473
MslI CAYNNNNRTG 2 cut(s) 157, 279
Msp20I TGGCCA 1 cut(s) 830
MspA1I CMGCKG 1 cut(s) 936
MspCI CTTAAG 1 cut(s) 200
MspR9I CCNGG 1 cut(s) 80
MunI CAATTG 1 cut(s) 144
MvaI CCWGG 1 cut(s) 80
MwoI GCNNNNNNNGC 5 cut(s) 265, 496, 920, 936, 1048
NdeII GATC 4 cut(s) 132, 166, 644, 902
NlaIV GGNNCC 1 cut(s) 868
NmuCI GTSAC 1 cut(s) 875
NsiI ATGCAT 1 cut(s) 1053
NspI RCATGY 2 cut(s) 257, 280
OliI CACNNNNGTG 1 cut(s) 279
PaeI GCATGC 1 cut(s) 257
PagI TCATGA 1 cut(s) 889
PceI AGGCCT 1 cut(s) 198
PciI ACATGT 1 cut(s) 276
PciSI GCTCTTC 1 cut(s) 243
PfeI GAWTC 2 cut(s) 601, 836
PkrI GCNGC 5 cut(s) 565, 932, 935, 938, 1033
PscI ACATGT 1 cut(s) 276
PshAI GACNNNNGTC 2 cut(s) 109, 897
Psp6I CCWGG 1 cut(s) 78
PspEI GGTNACC 1 cut(s) 875
PspFI CCCAGC 1 cut(s) 429
PspGI CCWGG 1 cut(s) 78
PspN4I GGNNCC 1 cut(s) 868
PstI CTGCAG 1 cut(s) 661
PstNI CAGNNNCTG 2 cut(s) 429, 936
PvuII CAGCTG 1 cut(s) 936
RsaI GTAC 5 cut(s) 121, 215, 610, 736, 868
RsaNI GTAC 5 cut(s) 120, 214, 609, 735, 867
RseI CAYNNNNRTG 2 cut(s) 157, 279
SapI GCTCTTC 1 cut(s) 243
SaqAI TTAA 4 cut(s) 9, 201, 207, 473
SatI GCNGC 5 cut(s) 564, 931, 934, 937, 1032
Sau3AI GATC 4 cut(s) 132, 166, 644, 902
ScaI AGTACT 1 cut(s) 736
ScrFI CCNGG 1 cut(s) 80
SduI GDGCHC 2 cut(s) 343, 1044
SfaNI GCATC 2 cut(s) 158, 274
SfcI CTRYAG 3 cut(s) 15, 657, 1125
SmiMI CAYNNNNRTG 2 cut(s) 157, 279
SmlI CTYRAG 1 cut(s) 200
SmoI CTYRAG 1 cut(s) 200
SphI GCATGC 1 cut(s) 257
Sse9I AATT 7 cut(s) 27, 144, 368, 637, 885, 945, 1136
SseBI AGGCCT 1 cut(s) 198
SsiI CCGC 2 cut(s) 512, 1032
SspMI CTAG 2 cut(s) 404, 570
StuI AGGCCT 1 cut(s) 198
StyD4I CCNGG 1 cut(s) 78
StyI CCWWGG 3 cut(s) 55, 612, 831
TaaI ACNGT 3 cut(s) 213, 969, 1039
TaqI TCGA 5 cut(s) 103, 235, 901, 992, 1062
TasI AATT 7 cut(s) 27, 144, 368, 637, 885, 945, 1136
TatI WGTACW 3 cut(s) 119, 213, 734
TauI GCSGC 1 cut(s) 1034
TfiI GAWTC 2 cut(s) 601, 836
Tru1I TTAA 4 cut(s) 9, 201, 207, 473
Tru9I TTAA 4 cut(s) 9, 201, 207, 473
TscAI CASTG 5 cut(s) 636, 666, 812, 901, 1042
TseFI GTSAC 1 cut(s) 875
TseI GCWGC 4 cut(s) 563, 930, 933, 936
Tsp45I GTSAC 1 cut(s) 875
TspDTI ATGAA 6 cut(s) 368, 456, 785, 878, 977, 1048
TspGWI ACGGA 1 cut(s) 323
TspRI CASTG 5 cut(s) 636, 666, 812, 901, 1042
Vha464I CTTAAG 1 cut(s) 200
XagI CCTNNNNNAGG 1 cut(s) 77
XapI RAATTY 4 cut(s) 368, 637, 885, 1136
XceI RCATGY 2 cut(s) 257, 280
XspI CTAG 2 cut(s) 404, 570
ZrmI AGTACT 1 cut(s) 736
Zsp2I ATGCAT 1 cut(s) 1053
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.